RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 LYRM9A8MSI8 78 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 C11orf94C9JXX5 98 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 F5H768 121 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 GNRH2O43555 120 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 LY6G6CO95867 125 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 IGHV3-53P01767 116 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 TYMSP04818 313 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 AKR1C3P42330 323 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 VAMP3Q15836 100 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 EIF5AL1Q6IS14 154 aaKnown RBP3.48□□□□□ -1.85
U2AF1-207ENST00000468039 ZNF493Q6ZR52 646 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 ZNF680Q8NEM1 530 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 ZC2HC1AQ96GY0 325 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 LINC00467Q9BRT7 94 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 APLNQ9ULZ1 77 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 LENEPQ9Y5L5 61 aa3.48□□□□□ -1.85
U2AF1-207ENST00000468039 DNAH5Q8TE73 4624 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 TMSB15BA0A087X1C1 80 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 SPINK4O60575 86 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 CRIP1P50238 77 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 RAB5CP51148 216 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 TCL1AP56279 114 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 UBE2G1P62253 170 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 OR5I1Q13606 314 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 SMUG1Q53HV7 270 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 Q6ZRP5 223 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 LINC00612Q8N6U2 182 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 HIST1H2BAQ96A08 127 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 DERL1Q9BUN8 251 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 NKX6-2Q9C056 277 aaPredicted RBP3.47□□□□□ -1.85
U2AF1-207ENST00000468039 HECTD4Q9Y4D8 3996 aa3.47□□□□□ -1.85
U2AF1-207ENST00000468039 TRGV2A0A075B6R0 118 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 TRAV1-1A0A0B4J248 108 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 IGKV3D-20A0A0C4DH25 116 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 IGHV3-16A0A0C4DH30 117 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 A0A0J9YY99 117 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 LOC100131303A0A0U1RQF7 123 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 GRIFINA4D1Z8 144 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 H7C423 109 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 M0R036 132 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 SH2D1AO60880 128 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 LTAP01374 205 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 ATP5G1P05496 136 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 PFN1P07737 140 aaKnown RBP3.46□□□□□ -1.86
U2AF1-207ENST00000468039 SFTA3P0C7M3 94 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 RPL19P84098 196 aaKnown RBP3.46□□□□□ -1.86
U2AF1-207ENST00000468039 DAZ2Q13117 558 aaKnown RBP3.46□□□□□ -1.86
U2AF1-207ENST00000468039 SOHLH1Q5JUK2 328 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 SAPCD1Q5SSQ6 148 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 IBA57Q5T440 356 aaKnown RBP3.46□□□□□ -1.86
U2AF1-207ENST00000468039 FMC1Q96HJ9 113 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 MANBALQ9NQG1 85 aa3.46□□□□□ -1.86
U2AF1-207ENST00000468039 TRBV6-1A0A0K0K1D8 114 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 RAB19A4D1S5 217 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 C9JCJ5 164 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 IFNA1P01562 189 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 ORM1P02763 201 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 BCL2P10415 239 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 RPL35P42766 123 aaKnown RBP3.45□□□□□ -1.86
U2AF1-207ENST00000468039 MEF2BQ02080 365 aaPredicted RBP3.45□□□□□ -1.86
U2AF1-207ENST00000468039 TDRG1Q3Y452 100 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 CENPWQ5EE01 88 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 BAGE2Q86Y30 109 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 KRTAP7-1Q8IUC3 87 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 POM121L12Q8N7R1 296 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 KCNS1Q96KK3 526 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 C9orf85Q96MD7 179 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 TCEAL7Q9BRU2 100 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 MED9Q9NWA0 146 aa3.45□□□□□ -1.86
U2AF1-207ENST00000468039 A0A096LPF7 62 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 IGHV3-73A0A0B4J1V6 119 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 A0A1B0GWB2 263 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 FABP5P3A8MUU1 101 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 B4DEV8 164 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 KRBOX1C9JBD0 128 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 H3BVH4 76 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 M0R2P5 195 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 NDUFS6O75380 124 aaKnown RBP3.44□□□□□ -1.86
U2AF1-207ENST00000468039 MGST1P10620 155 aaKnown RBP3.44□□□□□ -1.86
U2AF1-207ENST00000468039 RNASE3P12724 160 aaKnown RBP3.44□□□□□ -1.86
U2AF1-207ENST00000468039 PMCHP20382 165 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 ASIPP42127 132 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 CEBPGP53567 150 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 TCTAP57738 103 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 FAM162BQ5T6X4 162 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 LGALS9CQ6DKI2 356 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 UBE2DNLQ8IWF7 75 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 LYPD6BQ8NI32 183 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 VSIG2Q96IQ7 327 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 FAM210AQ96ND0 272 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 MAP1LC3CQ9BXW4 147 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 PARLQ9H300 379 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 VAX2Q9UIW0 290 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 ZFP30Q9Y2G7 519 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 PKD1P98161 4303 aa3.44□□□□□ -1.86
U2AF1-207ENST00000468039 LRP1BQ9NZR2 4599 aa3.43□□□□□ -1.86
U2AF1-207ENST00000468039 TRBV20OR9-2A0A075B6H5 130 aa3.43□□□□□ -1.86
U2AF1-207ENST00000468039 IGLV2-18A0A075B6J9 118 aa3.43□□□□□ -1.86
U2AF1-207ENST00000468039 TRAV4A0A0B4J268 109 aa3.43□□□□□ -1.86
U2AF1-207ENST00000468039 TRGV4A0A0C4DH28 118 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms