RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 SPANXN1Q5VSR9 72 aa11.17□□□□□ -0.62
TRIM56-203ENST00000467847 SCO2A0A1W2PP80 73 aa11.16□□□□□ -0.62
TRIM56-203ENST00000467847 SNAI2O43623 268 aa11.16□□□□□ -0.62
TRIM56-203ENST00000467847 PRSS1P07477 247 aa11.16□□□□□ -0.62
TRIM56-203ENST00000467847 SSTP61278 116 aa11.16□□□□□ -0.62
TRIM56-203ENST00000467847 BAGE2Q86Y30 109 aa11.16□□□□□ -0.62
TRIM56-203ENST00000467847 SFT2D1Q8WV19 159 aa11.16□□□□□ -0.62
TRIM56-203ENST00000467847 BATF3Q9NR55 127 aa11.16□□□□□ -0.62
TRIM56-203ENST00000467847 A0A1B0GV50 99 aa11.15□□□□□ -0.62
TRIM56-203ENST00000467847 PFDN1O60925 122 aa11.15□□□□□ -0.62
TRIM56-203ENST00000467847 OR5AL1P0C617 328 aa11.15□□□□□ -0.62
TRIM56-203ENST00000467847 TMEM97Q5BJF2 176 aa11.15□□□□□ -0.62
TRIM56-203ENST00000467847 CLPSL2Q6UWE3 100 aa11.15□□□□□ -0.62
TRIM56-203ENST00000467847 NTM-AS1Q6ZSK4 140 aa11.15□□□□□ -0.62
TRIM56-203ENST00000467847 MLST8Q9BVC4 326 aa11.15□□□□□ -0.62
TRIM56-203ENST00000467847 SSBP4Q9BWG4 385 aaPredicted RBP11.15□□□□□ -0.62
TRIM56-203ENST00000467847 SMIM17P0DL12 118 aa11.14□□□□□ -0.63
TRIM56-203ENST00000467847 RBX1P62877 108 aa11.14□□□□□ -0.63
TRIM56-203ENST00000467847 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
TRIM56-203ENST00000467847 LINC00269Q8N2A0 174 aa11.14□□□□□ -0.63
TRIM56-203ENST00000467847 FAM213BQ8TBF2 198 aa11.14□□□□□ -0.63
TRIM56-203ENST00000467847 DERL1Q9BUN8 251 aa11.14□□□□□ -0.63
TRIM56-203ENST00000467847 PRR34Q9NV39 138 aa11.14□□□□□ -0.63
TRIM56-203ENST00000467847 VAX2Q9UIW0 290 aa11.14□□□□□ -0.63
TRIM56-203ENST00000467847 PKHD1L1Q86WI1 4243 aa11.14□□□□□ -0.63
TRIM56-203ENST00000467847 TRBV25-1A0A075B6N4 114 aa11.13□□□□□ -0.63
TRIM56-203ENST00000467847 GAGE6Q13070 117 aa11.13□□□□□ -0.63
TRIM56-203ENST00000467847 MBD3L1Q8WWY6 194 aa11.13□□□□□ -0.63
TRIM56-203ENST00000467847 AP1S3Q96PC3 154 aa11.13□□□□□ -0.63
TRIM56-203ENST00000467847 C9orf163Q8N9P6 203 aa11.12□□□□□ -0.63
TRIM56-203ENST00000467847 UMAD1C9J7I0 102 aa11.11□□□□□ -0.63
TRIM56-203ENST00000467847 SMLR1H3BR10 107 aa11.11□□□□□ -0.63
TRIM56-203ENST00000467847 TMUB2Q71RG4 321 aa11.11□□□□□ -0.63
TRIM56-203ENST00000467847 KIF25-AS1Q9Y6Z4 181 aa11.11□□□□□ -0.63
TRIM56-203ENST00000467847 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.11□□□□□ -0.63
TRIM56-203ENST00000467847 HNRNPA3P51991 378 aaKnown RBP11.1□□□□□ -0.63
TRIM56-203ENST00000467847 KRTAP26-1Q6PEX3 210 aa11.1□□□□□ -0.63
TRIM56-203ENST00000467847 KCNRGQ8N5I3 272 aa11.1□□□□□ -0.63
TRIM56-203ENST00000467847 DAZAP1Q96EP5 407 aaKnown RBP11.1□□□□□ -0.63
TRIM56-203ENST00000467847 IGHV1-24A0A0C4DH33 117 aa11.09□□□□□ -0.63
TRIM56-203ENST00000467847 MGPP08493 103 aa11.09□□□□□ -0.63
TRIM56-203ENST00000467847 ZNF345Q14585 488 aa11.09□□□□□ -0.63
TRIM56-203ENST00000467847 IQCJQ1A5X6 159 aa11.09□□□□□ -0.63
TRIM56-203ENST00000467847 TPPP3Q9BW30 176 aa11.09□□□□□ -0.63
TRIM56-203ENST00000467847 IGLV10-54A0A075B6I4 117 aa11.08□□□□□ -0.64
TRIM56-203ENST00000467847 PANO1I0J062 215 aa11.08□□□□□ -0.64
TRIM56-203ENST00000467847 H2AFB1P0C5Y9 115 aa11.08□□□□□ -0.64
TRIM56-203ENST00000467847 RPL35P42766 123 aaKnown RBP11.08□□□□□ -0.64
TRIM56-203ENST00000467847 REG3AQ06141 175 aa11.08□□□□□ -0.64
TRIM56-203ENST00000467847 SDIM1Q6ZPB5 146 aa11.08□□□□□ -0.64
TRIM56-203ENST00000467847 CLRN3Q8NCR9 226 aa11.08□□□□□ -0.64
TRIM56-203ENST00000467847 M0QY20 66 aa11.07□□□□□ -0.64
TRIM56-203ENST00000467847 RGS21Q2M5E4 152 aa11.07□□□□□ -0.64
TRIM56-203ENST00000467847 hDV102S1A0JD36 115 aa11.06□□□□□ -0.64
TRIM56-203ENST00000467847 H7C1H1 209 aa11.06□□□□□ -0.64
TRIM56-203ENST00000467847 GZMBP10144 247 aa11.06□□□□□ -0.64
TRIM56-203ENST00000467847 SUMO4Q6EEV6 95 aa11.06□□□□□ -0.64
TRIM56-203ENST00000467847 FER1L6-AS1Q8NA97 138 aa11.06□□□□□ -0.64
TRIM56-203ENST00000467847 CNBPP62633 177 aaKnown RBP11.05□□□□□ -0.64
TRIM56-203ENST00000467847 TRAV8-4A0A0B4J246 113 aa11.04□□□□□ -0.64
TRIM56-203ENST00000467847 A0A0D9SG52 128 aa11.04□□□□□ -0.64
TRIM56-203ENST00000467847 KANTRA0A1W2PQU2 76 aa11.04□□□□□ -0.64
TRIM56-203ENST00000467847 BCL2L11O43521 198 aa11.04□□□□□ -0.64
TRIM56-203ENST00000467847 P01737 135 aa11.04□□□□□ -0.64
TRIM56-203ENST00000467847 IGLC6P0CF74 106 aa11.04□□□□□ -0.64
TRIM56-203ENST00000467847 NKX2-5P52952 324 aaPredicted RBP11.04□□□□□ -0.64
TRIM56-203ENST00000467847 RPS20P60866 119 aaKnown RBP11.04□□□□□ -0.64
TRIM56-203ENST00000467847 CENPWQ5EE01 88 aa11.04□□□□□ -0.64
TRIM56-203ENST00000467847 C20orf203Q8NBC4 194 aa11.04□□□□□ -0.64
TRIM56-203ENST00000467847 OR2D3Q8NGH3 330 aa11.04□□□□□ -0.64
TRIM56-203ENST00000467847 TMEM243Q9BU79 118 aa11.04□□□□□ -0.64
TRIM56-203ENST00000467847 GNG13Q9P2W3 67 aa11.04□□□□□ -0.64
TRIM56-203ENST00000467847 CACNG7P62955 275 aa11.03□□□□□ -0.64
TRIM56-203ENST00000467847 C11orf52Q96A22 123 aa11.03□□□□□ -0.64
TRIM56-203ENST00000467847 MANBALQ9NQG1 85 aa11.03□□□□□ -0.64
TRIM56-203ENST00000467847 IGLV4-60A0A075B6I1 120 aa11.02□□□□□ -0.65
TRIM56-203ENST00000467847 IGHV3-64A0A075B6Q5 118 aa11.02□□□□□ -0.65
TRIM56-203ENST00000467847 A0A1B0GUV1 79 aa11.02□□□□□ -0.65
TRIM56-203ENST00000467847 HMSDA8MTL9 139 aa11.02□□□□□ -0.65
TRIM56-203ENST00000467847 RAB5CP51148 216 aa11.02□□□□□ -0.65
TRIM56-203ENST00000467847 CIRBPQ14011 172 aaKnown RBP11.02□□□□□ -0.65
TRIM56-203ENST00000467847 RASL11AQ6T310 242 aa11.02□□□□□ -0.65
TRIM56-203ENST00000467847 DPH3Q96FX2 82 aa11.02□□□□□ -0.65
TRIM56-203ENST00000467847 AP5S1Q9NUS5 200 aa11.02□□□□□ -0.65
TRIM56-203ENST00000467847 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.01□□□□□ -0.65
TRIM56-203ENST00000467847 EIF5AP63241 154 aaKnown RBP11.01□□□□□ -0.65
TRIM56-203ENST00000467847 CCL20P78556 96 aa11.01□□□□□ -0.65
TRIM56-203ENST00000467847 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
TRIM56-203ENST00000467847 XKRY2A2RUG3 117 aa11□□□□□ -0.65
TRIM56-203ENST00000467847 C19orf71A6NCJ1 209 aa11□□□□□ -0.65
TRIM56-203ENST00000467847 F2Z2F3 143 aa11□□□□□ -0.65
TRIM56-203ENST00000467847 PGLYRP4Q96LB8 373 aa11□□□□□ -0.65
TRIM56-203ENST00000467847 UBE2L6O14933 153 aa10.99□□□□□ -0.65
TRIM56-203ENST00000467847 SLPIP03973 132 aa10.99□□□□□ -0.65
TRIM56-203ENST00000467847 TRGC1P0CF51 173 aa10.99□□□□□ -0.65
TRIM56-203ENST00000467847 GNG4P50150 75 aa10.99□□□□□ -0.65
TRIM56-203ENST00000467847 WDR73Q6P4I2 378 aa10.99□□□□□ -0.65
TRIM56-203ENST00000467847 Q6ZRU5 148 aa10.99□□□□□ -0.65
TRIM56-203ENST00000467847 NIT2Q9NQR4 276 aa10.99□□□□□ -0.65
TRIM56-203ENST00000467847 RAB19A4D1S5 217 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms