RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 LOC107984640A0A0U1RRK4 108 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 A0A1W2PPB8 328 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 GNG14A0A1W2PPG7 69 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 A0A1W2PRS3 328 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 IFITM5A6NNB3 132 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 KIR3DP1A8MWS1 328 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 LOC730098B7Z3J9 87 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 ARPC5O15511 151 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 HMGN1P05114 100 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 RPL7P18124 248 aaKnown RBP0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 CRYGSP22914 178 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 PSPHP78330 225 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 S100A12P80511 92 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 Q6ZS92 163 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 C3orf62Q6ZUJ4 267 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 TMEM35BQ8NCS4 154 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 OR5A2Q8NGI9 324 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 NAT14Q8WUY8 206 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 CCDC115Q96NT0 180 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 LPAR5Q9H1C0 372 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 CBLN4Q9NTU7 201 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 A0A0G2JMZ2 1700 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 TRIOO75962 3097 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 ZZEF1O43149 2961 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 CHD7Q9P2D1 2997 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 FAM208BQ5VWN6 2430 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 PTPRZ1P23471 2315 aaPredicted RBP0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 PLXNA1Q9UIW2 1896 aa0.88□□□□□ -2.27
GAPVD1-211ENST00000467707 ANKRD17O75179 2603 aaKnown RBP0.87□□□□□ -2.27
GAPVD1-211ENST00000467707 CHD9Q3L8U1 2897 aa0.87□□□□□ -2.27
GAPVD1-211ENST00000467707 ZNF462Q96JM2 2506 aa0.87□□□□□ -2.27
GAPVD1-211ENST00000467707 NBEAQ8NFP9 2946 aa0.87□□□□□ -2.27
GAPVD1-211ENST00000467707 TSTD3H0UI37 97 aa0.87□□□□□ -2.27
GAPVD1-211ENST00000467707 RPL22P35268 128 aaKnown RBP0.87□□□□□ -2.27
GAPVD1-211ENST00000467707 RPS28P62857 69 aaKnown RBP0.87□□□□□ -2.27
GAPVD1-211ENST00000467707 CCL19Q99731 98 aa0.87□□□□□ -2.27
GAPVD1-211ENST00000467707 FRYLO94915 3013 aa0.87□□□□□ -2.27
GAPVD1-211ENST00000467707 DOPEY1Q5JWR5 2465 aa0.87□□□□□ -2.27
GAPVD1-211ENST00000467707 DDX60Q8IY21 1712 aaKnown RBP0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 PTPN13Q12923 2485 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 LINC00587B1AMM8 73 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 GTF2A1P52655 376 aaPredicted RBP0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 SPCS2Q15005 226 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 ASB16-AS1Q495Z4 193 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 OR51A4Q8NGJ6 313 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 FAM107BQ9H098 131 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 FKBP11Q9NYL4 201 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 HSPB11Q9Y547 144 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 HECTD1Q9ULT8 2610 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 ASCC3Q8N3C0 2202 aaKnown RBP0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 KIF20BQ96Q89 1820 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 TENM4Q6N022 2769 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 FAM186AA6NE01 2351 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 TET1Q8NFU7 2136 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 ITPR3Q14573 2671 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 LRRC37AA6NMS7 1700 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 GVINP1Q7Z2Y8 2422 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 CEP250Q9BV73 2442 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 ABCA12Q86UK0 2595 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 MYO18BQ8IUG5 2567 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 WDR87Q6ZQQ6 2873 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 FREM2Q5SZK8 3169 aa0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 RIF1Q5UIP0 2472 aaKnown RBP0.86□□□□□ -2.27
GAPVD1-211ENST00000467707 COL12A1Q99715 3063 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 SPAARA0A1B0GVQ0 90 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 NUPR2A6NF83 97 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 SLC25A4P12235 298 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 CAV3P56539 151 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 BLCAPP62952 87 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 C10orf99Q6UWK7 81 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 WDFY3Q8IZQ1 3526 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 DEFB124Q8NES8 71 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 CGREF1Q99674 301 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 JPT1Q9UK76 154 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 MYH3P11055 1940 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 ANKRD36CQ5JPF3 1778 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 RELNP78509 3460 aa0.85□□□□□ -2.27
GAPVD1-211ENST00000467707 CELSR3Q9NYQ7 3312 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 CACNA1HO95180 2353 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 ARAP2Q8WZ64 1704 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 CFAP46Q8IYW2 2715 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 PIEZO2Q9H5I5 2752 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 LAMB1P07942 1786 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 A0A0D9SG42 100 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 LOC107984156A0A0G2JMH3 177 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 A0A1B0GV90 55 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 UQCRQO14949 82 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 RPS3P23396 243 aaKnown RBP eCLIP0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 SNRPD3P62318 126 aaKnown RBP0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 XAF1Q6GPH4 301 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 Q86TA4 180 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 ARL17AQ8IVW1 177 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 PYDC1Q8WXC3 89 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 SMIM7Q9BQ49 75 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 BATF3Q9NR55 127 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 SPANXA1Q9NS26 97 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 SPANXCQ9NY87 97 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 Q9Y3F1 56 aa0.84□□□□□ -2.27
GAPVD1-211ENST00000467707 DMDP11532 3685 aa0.84□□□□□ -2.28
GAPVD1-211ENST00000467707 TEX15Q9BXT5 2789 aa0.84□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms