RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 ICOSQ9Y6W8 199 aa11.51□□□□□ -0.57
CHD1L-205ENST00000467213 CNOT1A5YKK6 2376 aaKnown RBP11.51□□□□□ -0.57
CHD1L-205ENST00000467213 CEP250Q9BV73 2442 aa11.51□□□□□ -0.57
CHD1L-205ENST00000467213 IGHV1-58A0A0C4DH39 117 aa11.51□□□□□ -0.57
CHD1L-205ENST00000467213 DEFB1P60022 68 aa11.51□□□□□ -0.57
CHD1L-205ENST00000467213 PIK3CD-AS1Q5SR53 167 aa11.51□□□□□ -0.57
CHD1L-205ENST00000467213 TCF15Q12870 199 aa11.5□□□□□ -0.57
CHD1L-205ENST00000467213 MIAQ16674 131 aa11.5□□□□□ -0.57
CHD1L-205ENST00000467213 TIMM21Q9BVV7 248 aa11.5□□□□□ -0.57
CHD1L-205ENST00000467213 RPL11P62913 178 aaKnown RBP11.5□□□□□ -0.57
CHD1L-205ENST00000467213 Q1RN00 199 aa11.5□□□□□ -0.57
CHD1L-205ENST00000467213 H7C423 109 aa11.5□□□□□ -0.57
CHD1L-205ENST00000467213 TGFAP01135 160 aa11.5□□□□□ -0.57
CHD1L-205ENST00000467213 ELANEP08246 267 aa11.5□□□□□ -0.57
CHD1L-205ENST00000467213 ZNF56Q15929 161 aa11.5□□□□□ -0.57
CHD1L-205ENST00000467213 ABCA4P78363 2273 aa11.49□□□□□ -0.57
CHD1L-205ENST00000467213 IGHV1OR15-1A0A075B7D0 117 aa11.49□□□□□ -0.57
CHD1L-205ENST00000467213 A0A0J9YXV3 536 aa11.49□□□□□ -0.57
CHD1L-205ENST00000467213 TRBV7-7A0A0K0K1E9 115 aa11.49□□□□□ -0.57
CHD1L-205ENST00000467213 TINCRA0A1B0GVN0 87 aa11.49□□□□□ -0.57
CHD1L-205ENST00000467213 CRLF1O75462 422 aa11.49□□□□□ -0.57
CHD1L-205ENST00000467213 CACNA1HO95180 2353 aa11.49□□□□□ -0.57
CHD1L-205ENST00000467213 LST1O00453 97 aa11.49□□□□□ -0.57
CHD1L-205ENST00000467213 C2orf82Q6UX34 121 aa11.49□□□□□ -0.57
CHD1L-205ENST00000467213 C15orf53Q8NAA6 179 aa11.49□□□□□ -0.57
CHD1L-205ENST00000467213 TRAV12-3A0A0B4J271 114 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 TEX49A0A1B0GTD5 131 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 B5MCH6 92 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 ACYP1P07311 99 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 CFHR3Q02985 330 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 CDSNQ15517 529 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 TMEM219Q86XT9 240 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 IMUPQ9GZP8 106 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 SS18L2Q9UHA2 77 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 TRGV11A0A075B6L2 103 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 A6NDX4 124 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 FAM104AQ969W3 186 aa11.48□□□□□ -0.57
CHD1L-205ENST00000467213 SVEP1Q4LDE5 3571 aa11.47□□□□□ -0.57
CHD1L-205ENST00000467213 PPDPFQ9H3Y8 114 aa11.47□□□□□ -0.57
CHD1L-205ENST00000467213 MGAQ8IWI9 3026 aa11.47□□□□□ -0.57
CHD1L-205ENST00000467213 VSIG2Q96IQ7 327 aa11.47□□□□□ -0.57
CHD1L-205ENST00000467213 OPRPNQ99935 248 aaPredicted RBP11.47□□□□□ -0.57
CHD1L-205ENST00000467213 FAM110AQ9BQ89 295 aa11.46□□□□□ -0.57
CHD1L-205ENST00000467213 TMEM89A2RUT3 159 aa11.46□□□□□ -0.58
CHD1L-205ENST00000467213 TMEM61Q8N0U2 210 aa11.46□□□□□ -0.58
CHD1L-205ENST00000467213 ANKRD11Q6UB99 2663 aaPredicted RBP11.46□□□□□ -0.58
CHD1L-205ENST00000467213 GVINP1Q7Z2Y8 2422 aa11.46□□□□□ -0.58
CHD1L-205ENST00000467213 IGHV4-39P01824 125 aa11.45□□□□□ -0.58
CHD1L-205ENST00000467213 FAM74A4Q5TZK3 123 aa11.45□□□□□ -0.58
CHD1L-205ENST00000467213 BPESC1Q9GZL8 116 aa11.45□□□□□ -0.58
CHD1L-205ENST00000467213 SNRPD3P62318 126 aaKnown RBP11.45□□□□□ -0.58
CHD1L-205ENST00000467213 NDUFA12Q9UI09 145 aa11.45□□□□□ -0.58
CHD1L-205ENST00000467213 LINC00527Q9UJ94 153 aa11.45□□□□□ -0.58
CHD1L-205ENST00000467213 H7C2G1 150 aa11.44□□□□□ -0.58
CHD1L-205ENST00000467213 ACACAQ13085 2346 aa11.44□□□□□ -0.58
CHD1L-205ENST00000467213 A0A1W2PPR1 153 aa11.43□□□□□ -0.58
CHD1L-205ENST00000467213 K7EQG2 157 aa11.43□□□□□ -0.58
CHD1L-205ENST00000467213 PF4V1P10720 104 aa11.43□□□□□ -0.58
CHD1L-205ENST00000467213 CD28P10747 220 aa11.43□□□□□ -0.58
CHD1L-205ENST00000467213 IGLV5-45A0A087WSX0 123 aa11.43□□□□□ -0.58
CHD1L-205ENST00000467213 KLRB1Q12918 225 aa11.43□□□□□ -0.58
CHD1L-205ENST00000467213 PRORYQ9H606 182 aa11.43□□□□□ -0.58
CHD1L-205ENST00000467213 CCDC179H3BU77 68 aa11.42□□□□□ -0.58
CHD1L-205ENST00000467213 SPXQ9BT56 116 aa11.42□□□□□ -0.58
CHD1L-205ENST00000467213 IGHV3-11P01762 117 aa11.42□□□□□ -0.58
CHD1L-205ENST00000467213 TIRAPP58753 221 aa11.42□□□□□ -0.58
CHD1L-205ENST00000467213 LY6DQ14210 128 aa11.42□□□□□ -0.58
CHD1L-205ENST00000467213 ADAMTSL4-AS1Q5T5F5 129 aa11.42□□□□□ -0.58
CHD1L-205ENST00000467213 COPS9Q8WXC6 57 aa11.42□□□□□ -0.58
CHD1L-205ENST00000467213 DCHS2Q6V1P9 2916 aa11.42□□□□□ -0.58
CHD1L-205ENST00000467213 A8MTW9 85 aa11.41□□□□□ -0.58
CHD1L-205ENST00000467213 TMEM126AQ9H061 195 aa11.41□□□□□ -0.58
CHD1L-205ENST00000467213 NDUFA1O15239 70 aa11.41□□□□□ -0.58
CHD1L-205ENST00000467213 DNAJC30Q96LL9 226 aa11.4□□□□□ -0.58
CHD1L-205ENST00000467213 IGHV3-64A0A075B6Q5 118 aa11.39□□□□□ -0.59
CHD1L-205ENST00000467213 FOXC1Q12948 553 aa11.39□□□□□ -0.59
CHD1L-205ENST00000467213 SDIM1Q6ZPB5 146 aa11.39□□□□□ -0.59
CHD1L-205ENST00000467213 RELNP78509 3460 aa11.39□□□□□ -0.59
CHD1L-205ENST00000467213 PRSS2P07478 247 aa11.39□□□□□ -0.59
CHD1L-205ENST00000467213 NBL1P41271 181 aa11.39□□□□□ -0.59
CHD1L-205ENST00000467213 FAM19A3Q7Z5A8 133 aa11.39□□□□□ -0.59
CHD1L-205ENST00000467213 UBE2D4Q9Y2X8 147 aa11.39□□□□□ -0.59
CHD1L-205ENST00000467213 PRRC2AP48634 2157 aaKnown RBP11.39□□□□□ -0.59
CHD1L-205ENST00000467213 TMEM101Q96IK0 257 aa11.39□□□□□ -0.59
CHD1L-205ENST00000467213 IGKV3-7A0A075B6H7 116 aa11.38□□□□□ -0.59
CHD1L-205ENST00000467213 ATP5G1P05496 136 aa11.38□□□□□ -0.59
CHD1L-205ENST00000467213 PSMB8P28062 276 aa11.38□□□□□ -0.59
CHD1L-205ENST00000467213 BEX4Q9NWD9 120 aaPredicted RBP11.38□□□□□ -0.59
CHD1L-205ENST00000467213 AKAP13Q12802 2813 aa11.38□□□□□ -0.59
CHD1L-205ENST00000467213 UCNP55089 124 aa11.38□□□□□ -0.59
CHD1L-205ENST00000467213 CHCHD7Q9BUK0 85 aa11.38□□□□□ -0.59
CHD1L-205ENST00000467213 RIF1Q5UIP0 2472 aaKnown RBP11.38□□□□□ -0.59
CHD1L-205ENST00000467213 TRAV8-3A0A0A6YYJ7 113 aa11.37□□□□□ -0.59
CHD1L-205ENST00000467213 LINC00467Q9BRT7 94 aa11.37□□□□□ -0.59
CHD1L-205ENST00000467213 CIRBPQ14011 172 aaKnown RBP11.37□□□□□ -0.59
CHD1L-205ENST00000467213 DEFB104AQ8WTQ1 72 aa11.37□□□□□ -0.59
CHD1L-205ENST00000467213 UBTD1Q9HAC8 227 aa11.37□□□□□ -0.59
CHD1L-205ENST00000467213 TNFRSF18Q9Y5U5 241 aa11.37□□□□□ -0.59
CHD1L-205ENST00000467213 HRNRQ86YZ3 2850 aaPredicted RBP11.37□□□□□ -0.59
CHD1L-205ENST00000467213 H3BUX3 64 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms