RNA–Protein interactions for RNA: ENST00000466560.1

LINC00879-204, long intergenic non-protein coding RNA 879, humanhuman

TSL 5

Gene LINC00879, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-204ENST00000466560 LSM10Q969L4 123 aaKnown RBP1.27□□□□□ -2.21
LINC00879-204ENST00000466560 C14orf144Q96I85 54 aa1.27□□□□□ -2.21
LINC00879-204ENST00000466560 PHIPQ8WWQ0 1821 aa1.26□□□□□ -2.21
LINC00879-204ENST00000466560 IFT140Q96RY7 1462 aa1.26□□□□□ -2.21
LINC00879-204ENST00000466560 K7EIL1 84 aa1.26□□□□□ -2.21
LINC00879-204ENST00000466560 SPINT3P49223 89 aa1.26□□□□□ -2.21
LINC00879-204ENST00000466560 SSBP1Q04837 148 aaKnown RBP1.26□□□□□ -2.21
LINC00879-204ENST00000466560 C4orf33Q8N1A6 199 aa1.26□□□□□ -2.21
LINC00879-204ENST00000466560 APOC4-APOC2K7ER74 178 aa1.25□□□□□ -2.21
LINC00879-204ENST00000466560 TNFP01375 233 aa1.25□□□□□ -2.21
LINC00879-204ENST00000466560 APOC2P02655 101 aa1.25□□□□□ -2.21
LINC00879-204ENST00000466560 CCL3L1P16619 93 aa1.25□□□□□ -2.21
LINC00879-204ENST00000466560 RBP2P50120 134 aa1.25□□□□□ -2.21
LINC00879-204ENST00000466560 NPC2P61916 151 aa1.25□□□□□ -2.21
LINC00879-204ENST00000466560 UBE2G1P62253 170 aa1.25□□□□□ -2.21
LINC00879-204ENST00000466560 CATR1Q13166 79 aa1.25□□□□□ -2.21
LINC00879-204ENST00000466560 AKAP12Q02952 1782 aa1.25□□□□□ -2.21
LINC00879-204ENST00000466560 ROBO1Q9Y6N7 1651 aa1.25□□□□□ -2.21
LINC00879-204ENST00000466560 SMARCA2P51531 1590 aa1.25□□□□□ -2.21
LINC00879-204ENST00000466560 SMIM6P0DI80 62 aa1.24□□□□□ -2.21
LINC00879-204ENST00000466560 C9orf153Q5TBE3 101 aa1.24□□□□□ -2.21
LINC00879-204ENST00000466560 ZNF818PQ6ZRF7 136 aa1.24□□□□□ -2.21
LINC00879-204ENST00000466560 GTF2H5Q6ZYL4 71 aa1.24□□□□□ -2.21
LINC00879-204ENST00000466560 C10orf82Q8WW14 230 aa1.24□□□□□ -2.21
LINC00879-204ENST00000466560 PPP3R2Q96LZ3 170 aa1.24□□□□□ -2.21
LINC00879-204ENST00000466560 NRKQ7Z2Y5 1582 aa1.24□□□□□ -2.21
LINC00879-204ENST00000466560 PZPP20742 1482 aa1.24□□□□□ -2.21
LINC00879-204ENST00000466560 ARAP2Q8WZ64 1704 aa1.23□□□□□ -2.21
LINC00879-204ENST00000466560 RBM3P98179 157 aaKnown RBP1.23□□□□□ -2.21
LINC00879-204ENST00000466560 C20orf197Q8N268 126 aa1.23□□□□□ -2.21
LINC00879-204ENST00000466560 SPTSSBQ8NFR3 76 aa1.23□□□□□ -2.21
LINC00879-204ENST00000466560 PLAC4Q8WY50 150 aa1.23□□□□□ -2.21
LINC00879-204ENST00000466560 SPANXDQ9BXN6 97 aa1.23□□□□□ -2.21
LINC00879-204ENST00000466560 PSME4Q14997 1843 aa1.23□□□□□ -2.21
LINC00879-204ENST00000466560 SIPA1L3O60292 1781 aaPredicted RBP1.23□□□□□ -2.21
LINC00879-204ENST00000466560 PXDNQ92626 1479 aa1.23□□□□□ -2.21
LINC00879-204ENST00000466560 OOSP1A8MZH6 123 aa1.22□□□□□ -2.21
LINC00879-204ENST00000466560 UBE2D1P51668 147 aa1.22□□□□□ -2.21
LINC00879-204ENST00000466560 CCL8P80075 99 aa1.22□□□□□ -2.21
LINC00879-204ENST00000466560 INSL4Q14641 139 aa1.22□□□□□ -2.21
LINC00879-204ENST00000466560 SVBPQ8N300 66 aa1.22□□□□□ -2.21
LINC00879-204ENST00000466560 Q8N8P6 123 aa1.22□□□□□ -2.21
LINC00879-204ENST00000466560 COX7B2Q8TF08 81 aa1.22□□□□□ -2.21
LINC00879-204ENST00000466560 IER3IP1Q9Y5U9 82 aa1.22□□□□□ -2.21
LINC00879-204ENST00000466560 ABCA3Q99758 1704 aa1.22□□□□□ -2.21
LINC00879-204ENST00000466560 MRC2Q9UBG0 1479 aa1.22□□□□□ -2.21
LINC00879-204ENST00000466560 LOC285556D6RIA3 1793 aa1.21□□□□□ -2.22
LINC00879-204ENST00000466560 MED12Q93074 2177 aa1.21□□□□□ -2.22
LINC00879-204ENST00000466560 MAPKBP1O60336 1514 aa1.21□□□□□ -2.22
LINC00879-204ENST00000466560 TANC1Q9C0D5 1861 aa1.21□□□□□ -2.22
LINC00879-204ENST00000466560 TRBV7-1A0A0A6YYK4 115 aa1.21□□□□□ -2.22
LINC00879-204ENST00000466560 ZNF137PP52743 207 aa1.21□□□□□ -2.22
LINC00879-204ENST00000466560 RPL37P61927 97 aaKnown RBP1.21□□□□□ -2.22
LINC00879-204ENST00000466560 SPINK9Q5DT21 86 aa1.21□□□□□ -2.22
LINC00879-204ENST00000466560 SCP2D1Q9UJQ7 156 aa1.21□□□□□ -2.22
LINC00879-204ENST00000466560 KIAA0100Q14667 2235 aaKnown RBP1.21□□□□□ -2.22
LINC00879-204ENST00000466560 CASKIN1Q8WXD9 1431 aa1.21□□□□□ -2.22
LINC00879-204ENST00000466560 CCNB3Q8WWL7 1395 aa1.21□□□□□ -2.22
LINC00879-204ENST00000466560 TMEM218A2RU14 115 aa1.2□□□□□ -2.22
LINC00879-204ENST00000466560 F2Z2F3 143 aa1.2□□□□□ -2.22
LINC00879-204ENST00000466560 LY6G6CO95867 125 aa1.2□□□□□ -2.22
LINC00879-204ENST00000466560 IFITM1P13164 125 aa1.2□□□□□ -2.22
LINC00879-204ENST00000466560 ELOF1P60002 83 aaKnown RBP1.2□□□□□ -2.22
LINC00879-204ENST00000466560 HSD52Q0P140 79 aa1.2□□□□□ -2.22
LINC00879-204ENST00000466560 C8orf59Q8N0T1 100 aaPredicted RBP1.2□□□□□ -2.22
LINC00879-204ENST00000466560 V9GYV3 84 aa1.2□□□□□ -2.22
LINC00879-204ENST00000466560 KMT2BQ9UMN6 2715 aaPredicted RBP1.2□□□□□ -2.22
LINC00879-204ENST00000466560 TNS1Q9HBL0 1735 aaKnown RBP1.2□□□□□ -2.22
LINC00879-204ENST00000466560 CC2D2AQ9P2K1 1620 aa1.19□□□□□ -2.22
LINC00879-204ENST00000466560 TRAV13-2A0A0B4J235 113 aa1.19□□□□□ -2.22
LINC00879-204ENST00000466560 SPINK8P0C7L1 97 aa1.19□□□□□ -2.22
LINC00879-204ENST00000466560 C6orf52Q5T4I8 152 aa1.19□□□□□ -2.22
LINC00879-204ENST00000466560 AQP10Q96PS8 301 aa1.19□□□□□ -2.22
LINC00879-204ENST00000466560 CNTLNQ9NXG0 1405 aa1.19□□□□□ -2.22
LINC00879-204ENST00000466560 ZFYVE16Q7Z3T8 1539 aa1.19□□□□□ -2.22
LINC00879-204ENST00000466560 SPHKAPQ2M3C7 1700 aa1.18□□□□□ -2.22
LINC00879-204ENST00000466560 ABCA4P78363 2273 aa1.18□□□□□ -2.22
LINC00879-204ENST00000466560 CPSF1Q10570 1443 aaKnown RBP1.18□□□□□ -2.22
LINC00879-204ENST00000466560 TRAV30A0A087WSZ9 112 aa1.18□□□□□ -2.22
LINC00879-204ENST00000466560 FAM24AA6NFZ4 105 aa1.18□□□□□ -2.22
LINC00879-204ENST00000466560 S100A8P05109 93 aa1.18□□□□□ -2.22
LINC00879-204ENST00000466560 DOCK11Q5JSL3 2073 aa1.18□□□□□ -2.22
LINC00879-204ENST00000466560 CDK13Q14004 1512 aaKnown RBP1.18□□□□□ -2.22
LINC00879-204ENST00000466560 SHROOM2Q13796 1616 aa1.18□□□□□ -2.22
LINC00879-204ENST00000466560 HCG22E2RYF7 251 aa1.17□□□□□ -2.22
LINC00879-204ENST00000466560 S100A10P60903 97 aa1.17□□□□□ -2.22
LINC00879-204ENST00000466560 C5orf38Q86SI9 138 aa1.17□□□□□ -2.22
LINC00879-204ENST00000466560 TET3O43151 1660 aa1.16□□□□□ -2.22
LINC00879-204ENST00000466560 PRDM2Q13029 1718 aa1.16□□□□□ -2.22
LINC00879-204ENST00000466560 ANKRD26Q9UPS8 1709 aa1.16□□□□□ -2.22
LINC00879-204ENST00000466560 A0A096LNT2 108 aa1.16□□□□□ -2.22
LINC00879-204ENST00000466560 SIX6O95475 246 aa1.16□□□□□ -2.22
LINC00879-204ENST00000466560 NCMAPQ5T1S8 102 aa1.16□□□□□ -2.22
LINC00879-204ENST00000466560 ACBD7Q8N6N7 88 aa1.16□□□□□ -2.22
LINC00879-204ENST00000466560 BPESC1Q9GZL8 116 aa1.16□□□□□ -2.22
LINC00879-204ENST00000466560 LAMC3Q9Y6N6 1575 aa1.16□□□□□ -2.22
LINC00879-204ENST00000466560 PPIP5K1Q6PFW1 1433 aa1.15□□□□□ -2.22
LINC00879-204ENST00000466560 VPS8Q8N3P4 1428 aa1.15□□□□□ -2.22
LINC00879-204ENST00000466560 A0A087WTM6 91 aa1.15□□□□□ -2.23
LINC00879-204ENST00000466560 UBE2L5PA0A1B0GUS4 154 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms