RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 Q6ZQT7 251 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 COMMD7Q86VX2 200 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 OR10G8Q8NGN5 311 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 BTF3L4Q96K17 158 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 TPPP3Q9BW30 176 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 CTDSP1Q9GZU7 261 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 RNASE7Q9H1E1 156 aaKnown RBP4.85□□□□□ -1.63
CLDN4-204ENST00000466411 VPS13BQ7Z7G8 4022 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 FAT1Q14517 4588 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 RNF213Q63HN8 5207 aa4.85□□□□□ -1.63
CLDN4-204ENST00000466411 A0A087WWC5 75 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 HIGD1CA8MV81 97 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 K7EQD1 137 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 PPP1R17O96001 155 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 IGHV3-53P01767 116 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 CRYBA4P53673 196 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 TIRAPP58753 221 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 PKIAP61925 76 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 RIGQ13278 110 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 FHL2Q14192 279 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 TMEM97Q5BJF2 176 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 KCNIP4Q6PIL6 250 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 LYZL1Q6UWQ5 148 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 ATP5L2Q7Z4Y8 100 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 OR10AG1Q8NH19 301 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 IMMP2LQ96T52 175 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 DPH3P1Q9H4G8 78 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 APLNQ9ULZ1 77 aa4.84□□□□□ -1.63
CLDN4-204ENST00000466411 TRAV9-1A0A075B6T8 112 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 INAFM2P0DMQ5 153 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 BTF3P20290 206 aaKnown RBP4.83□□□□□ -1.64
CLDN4-204ENST00000466411 HOXA5P20719 270 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 NTF3P20783 257 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 RPL36AP83881 106 aaKnown RBP4.83□□□□□ -1.64
CLDN4-204ENST00000466411 RHEBQ15382 184 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 TWIST1Q15672 202 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 ZNF56Q15929 161 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 FAM74A4Q5TZK3 123 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 NEGR1Q7Z3B1 354 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 UBE2DNLQ8IWF7 75 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 RPL36ALQ969Q0 106 aaKnown RBP4.83□□□□□ -1.64
CLDN4-204ENST00000466411 ZNF479Q96JC4 524 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 DNAJC30Q96LL9 226 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 TMEM242Q9NWH2 141 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 V9GYV3 84 aa4.83□□□□□ -1.64
CLDN4-204ENST00000466411 NACAE9PAV3 2078 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 KRTAP9-6A0A140TA67 174 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 SMIM27A0A1W2PRY6 76 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 C9JQL5 133 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 F5H697 171 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 SNAPINO95295 136 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 NUDT3O95989 172 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 S100PP25815 95 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 TTC32Q5I0X7 151 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 RASL11AQ6T310 242 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 SVBPQ8N300 66 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 POM121L12Q8N7R1 296 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 SLC25A29Q8N8R3 303 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 UPK3BQ9BT76 320 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 TMEM191AQ9H0A3 160 aa4.82□□□□□ -1.64
CLDN4-204ENST00000466411 CARHSP1Q9Y2V2 147 aaKnown RBP4.82□□□□□ -1.64
CLDN4-204ENST00000466411 TRBV7-3A0A075B6L6 115 aa4.81□□□□□ -1.64
CLDN4-204ENST00000466411 TRAV9-2A0A087WT02 112 aa4.81□□□□□ -1.64
CLDN4-204ENST00000466411 B5MCH6 92 aa4.81□□□□□ -1.64
CLDN4-204ENST00000466411 TCAPO15273 167 aa4.81□□□□□ -1.64
CLDN4-204ENST00000466411 CRYGDP07320 174 aa4.81□□□□□ -1.64
CLDN4-204ENST00000466411 GZMBP10144 247 aa4.81□□□□□ -1.64
CLDN4-204ENST00000466411 COX19Q49B96 90 aa4.81□□□□□ -1.64
CLDN4-204ENST00000466411 C10orf91Q5T1B1 145 aa4.81□□□□□ -1.64
CLDN4-204ENST00000466411 UFSP1Q6NVU6 142 aa4.81□□□□□ -1.64
CLDN4-204ENST00000466411 DAZ4Q86SG3 579 aaKnown RBP4.81□□□□□ -1.64
CLDN4-204ENST00000466411 GTSF1Q8WW33 167 aa4.81□□□□□ -1.64
CLDN4-204ENST00000466411 C1orf43Q9BWL3 253 aa4.81□□□□□ -1.64
CLDN4-204ENST00000466411 DAZ3Q9NR90 486 aaKnown RBP4.81□□□□□ -1.64
CLDN4-204ENST00000466411 A0A087WWL8 130 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 A0A096LPF7 62 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 TRAV8-6A0A0B4J262 113 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 A0A0J9YY99 117 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 PPBPP02775 128 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 HBBP68871 147 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 C10orf126Q8N4M7 172 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 C14orf178Q8N769 122 aaPredicted RBP4.8□□□□□ -1.64
CLDN4-204ENST00000466411 NUP35Q8NFH5 326 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 SVIPQ8NHG7 77 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 MRAP2Q96G30 205 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 VSIG2Q96IQ7 327 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 PGLYRP4Q96LB8 373 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 GTSF1LQ9H1H1 148 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 MRPS16Q9Y3D3 137 aaKnown RBP4.8□□□□□ -1.64
CLDN4-204ENST00000466411 TNFRSF18Q9Y5U5 241 aa4.8□□□□□ -1.64
CLDN4-204ENST00000466411 MGPP08493 103 aa4.79□□□□□ -1.64
CLDN4-204ENST00000466411 SMAGPQ0VAQ4 97 aa4.79□□□□□ -1.64
CLDN4-204ENST00000466411 ATP6V0E2Q8NHE4 81 aa4.79□□□□□ -1.64
CLDN4-204ENST00000466411 CHCHD7Q9BUK0 85 aa4.79□□□□□ -1.64
CLDN4-204ENST00000466411 NIT2Q9NQR4 276 aa4.79□□□□□ -1.64
CLDN4-204ENST00000466411 KIF25-AS1Q9Y6Z4 181 aa4.79□□□□□ -1.64
CLDN4-204ENST00000466411 IGHV3-73A0A0B4J1V6 119 aa4.78□□□□□ -1.64
CLDN4-204ENST00000466411 EPM2AB3EWF7 344 aa4.78□□□□□ -1.64
CLDN4-204ENST00000466411 MT-ND6P03923 174 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms