RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 H3BMM0 161 aa14.7□□□□□ -0.06
SDF4-205ENST00000465727 TRBV12-3P01733 135 aa14.7□□□□□ -0.06
SDF4-205ENST00000465727 UBE2WQ96B02 151 aa14.7□□□□□ -0.06
SDF4-205ENST00000465727 M0QY20 66 aa14.69□□□□□ -0.06
SDF4-205ENST00000465727 C20orf203Q8NBC4 194 aa14.69□□□□□ -0.06
SDF4-205ENST00000465727 A0A0J9YXY3 114 aa14.69□□□□□ -0.06
SDF4-205ENST00000465727 CRLF1O75462 422 aa14.69□□□□□ -0.06
SDF4-205ENST00000465727 DEFB104AQ8WTQ1 72 aa14.69□□□□□ -0.06
SDF4-205ENST00000465727 C9orf85Q96MD7 179 aa14.69□□□□□ -0.06
SDF4-205ENST00000465727 ODF3Q96PU9 254 aa14.69□□□□□ -0.06
SDF4-205ENST00000465727 TEX49A0A1B0GTD5 131 aa14.67□□□□□ -0.06
SDF4-205ENST00000465727 TRIAP1O43715 76 aa14.67□□□□□ -0.06
SDF4-205ENST00000465727 ELANEP08246 267 aa14.67□□□□□ -0.06
SDF4-205ENST00000465727 ID1P41134 155 aa14.67□□□□□ -0.06
SDF4-205ENST00000465727 RHPN1-AS1Q9BWJ2 59 aa14.67□□□□□ -0.06
SDF4-205ENST00000465727 PKD1L2Q7Z442 2459 aa14.67□□□□□ -0.06
SDF4-205ENST00000465727 H3BT86 120 aa14.67□□□□□ -0.06
SDF4-205ENST00000465727 IGHV4-39P01824 125 aa14.67□□□□□ -0.06
SDF4-205ENST00000465727 ZNF56Q15929 161 aa14.67□□□□□ -0.06
SDF4-205ENST00000465727 FAM74A4Q5TZK3 123 aa14.67□□□□□ -0.06
SDF4-205ENST00000465727 TMEM219Q86XT9 240 aa14.67□□□□□ -0.06
SDF4-205ENST00000465727 CCL21O00585 134 aa14.66□□□□□ -0.06
SDF4-205ENST00000465727 LINC00527Q9UJ94 153 aa14.66□□□□□ -0.06
SDF4-205ENST00000465727 IGHV3-16A0A0C4DH30 117 aa14.65□□□□□ -0.06
SDF4-205ENST00000465727 I3L3M4 83 aa14.65□□□□□ -0.06
SDF4-205ENST00000465727 COX6CP09669 75 aa14.65□□□□□ -0.06
SDF4-205ENST00000465727 OPRPNQ99935 248 aaPredicted RBP14.65□□□□□ -0.06
SDF4-205ENST00000465727 DAZ1Q9NQZ3 744 aaKnown RBP14.65□□□□□ -0.06
SDF4-205ENST00000465727 IGLV4-3A0A075B6K6 122 aa14.65□□□□□ -0.06
SDF4-205ENST00000465727 FAM240AA0A1B0GVK7 77 aa14.65□□□□□ -0.06
SDF4-205ENST00000465727 C15orf53Q8NAA6 179 aa14.65□□□□□ -0.06
SDF4-205ENST00000465727 SPANXDQ9BXN6 97 aa14.65□□□□□ -0.06
SDF4-205ENST00000465727 SPANXCQ9NY87 97 aa14.65□□□□□ -0.06
SDF4-205ENST00000465727 IGHV3-30-3P0DP02 117 aa14.64□□□□□ -0.07
SDF4-205ENST00000465727 C2orf82Q6UX34 121 aa14.64□□□□□ -0.07
SDF4-205ENST00000465727 TRAV12-3A0A0B4J271 114 aa14.64□□□□□ -0.07
SDF4-205ENST00000465727 A0A0J9YXV3 536 aa14.64□□□□□ -0.07
SDF4-205ENST00000465727 LITAFQ99732 161 aa14.64□□□□□ -0.07
SDF4-205ENST00000465727 TIMM21Q9BVV7 248 aa14.64□□□□□ -0.07
SDF4-205ENST00000465727 ICOSQ9Y6W8 199 aa14.64□□□□□ -0.07
SDF4-205ENST00000465727 IGKV3-7A0A075B6H7 116 aa14.63□□□□□ -0.07
SDF4-205ENST00000465727 IGHV3-64A0A075B6Q5 118 aa14.63□□□□□ -0.07
SDF4-205ENST00000465727 PYGO1Q9Y3Y4 419 aa14.63□□□□□ -0.07
SDF4-205ENST00000465727 BEX4Q9NWD9 120 aaPredicted RBP14.62□□□□□ -0.07
SDF4-205ENST00000465727 CCDC179H3BU77 68 aa14.61□□□□□ -0.07
SDF4-205ENST00000465727 H7C423 109 aa14.61□□□□□ -0.07
SDF4-205ENST00000465727 LMO4P61968 165 aa14.61□□□□□ -0.07
SDF4-205ENST00000465727 MRPS36P82909 103 aaKnown RBP14.61□□□□□ -0.07
SDF4-205ENST00000465727 HRNRQ86YZ3 2850 aaPredicted RBP14.61□□□□□ -0.07
SDF4-205ENST00000465727 K7EMT4 169 aa14.61□□□□□ -0.07
SDF4-205ENST00000465727 DCANP1Q8TF63 244 aa14.61□□□□□ -0.07
SDF4-205ENST00000465727 CDSNQ15517 529 aa14.6□□□□□ -0.07
SDF4-205ENST00000465727 DEFB121Q5J5C9 76 aa14.6□□□□□ -0.07
SDF4-205ENST00000465727 IGHV3-11P01762 117 aa14.59□□□□□ -0.07
SDF4-205ENST00000465727 ITPR1Q14643 2758 aa14.59□□□□□ -0.07
SDF4-205ENST00000465727 IGHV1-58A0A0C4DH39 117 aa14.59□□□□□ -0.07
SDF4-205ENST00000465727 IGHG2P01859 326 aa14.59□□□□□ -0.07
SDF4-205ENST00000465727 ADORA2A-AS1P86434 159 aa14.59□□□□□ -0.07
SDF4-205ENST00000465727 MIAQ16674 131 aa14.59□□□□□ -0.07
SDF4-205ENST00000465727 EDA2RQ9HAV5 297 aa14.59□□□□□ -0.07
SDF4-205ENST00000465727 K7ENP7 123 aa14.58□□□□□ -0.08
SDF4-205ENST00000465727 SPXQ9BT56 116 aa14.58□□□□□ -0.08
SDF4-205ENST00000465727 YAE1D1Q9NRH1 226 aa14.58□□□□□ -0.08
SDF4-205ENST00000465727 CHD6Q8TD26 2715 aa14.58□□□□□ -0.08
SDF4-205ENST00000465727 PRSS2P07478 247 aa14.57□□□□□ -0.08
SDF4-205ENST00000465727 ZNF580Q9UK33 172 aa14.57□□□□□ -0.08
SDF4-205ENST00000465727 LST1O00453 97 aa14.57□□□□□ -0.08
SDF4-205ENST00000465727 CD28P10747 220 aa14.57□□□□□ -0.08
SDF4-205ENST00000465727 FAM110AQ9BQ89 295 aa14.57□□□□□ -0.08
SDF4-205ENST00000465727 TLN1Q9Y490 2541 aaKnown RBP14.56□□□□□ -0.08
SDF4-205ENST00000465727 IGHV1OR15-1A0A075B7D0 117 aa14.56□□□□□ -0.08
SDF4-205ENST00000465727 PF4V1P10720 104 aa14.56□□□□□ -0.08
SDF4-205ENST00000465727 NDUFA12Q9UI09 145 aa14.56□□□□□ -0.08
SDF4-205ENST00000465727 MED13LQ71F56 2210 aa14.56□□□□□ -0.08
SDF4-205ENST00000465727 ZFYVE26Q68DK2 2539 aa14.56□□□□□ -0.08
SDF4-205ENST00000465727 BPESC1Q9GZL8 116 aa14.56□□□□□ -0.08
SDF4-205ENST00000465727 PRRC2AP48634 2157 aaKnown RBP14.54□□□□□ -0.08
SDF4-205ENST00000465727 TIMM17BO60830 172 aa14.54□□□□□ -0.08
SDF4-205ENST00000465727 TRBV7-7A0A0K0K1E9 115 aa14.54□□□□□ -0.08
SDF4-205ENST00000465727 TMEM61Q8N0U2 210 aa14.54□□□□□ -0.08
SDF4-205ENST00000465727 TINCRA0A1B0GVN0 87 aa14.53□□□□□ -0.08
SDF4-205ENST00000465727 IGLV1-40P01703 118 aa14.53□□□□□ -0.08
SDF4-205ENST00000465727 ADAMTSL4-AS1Q5T5F5 129 aa14.53□□□□□ -0.08
SDF4-205ENST00000465727 VSIG2Q96IQ7 327 aa14.53□□□□□ -0.08
SDF4-205ENST00000465727 PTPRQQ9UMZ3 2332 aa14.53□□□□□ -0.08
SDF4-205ENST00000465727 ADARB2-AS1A8MUL3 147 aa14.53□□□□□ -0.08
SDF4-205ENST00000465727 TRGV11A0A075B6L2 103 aa14.52□□□□□ -0.09
SDF4-205ENST00000465727 SNRPD3P62318 126 aaKnown RBP14.52□□□□□ -0.09
SDF4-205ENST00000465727 FAM104AQ969W3 186 aa14.52□□□□□ -0.09
SDF4-205ENST00000465727 TRAV8-3A0A0A6YYJ7 113 aa14.51□□□□□ -0.09
SDF4-205ENST00000465727 A0A1W2PPR1 153 aa14.51□□□□□ -0.09
SDF4-205ENST00000465727 ACYP1P07311 99 aa14.51□□□□□ -0.09
SDF4-205ENST00000465727 TRAV12-2A0A075B6T6 113 aa14.5□□□□□ -0.09
SDF4-205ENST00000465727 RNF152Q8N8N0 203 aa14.5□□□□□ -0.09
SDF4-205ENST00000465727 CLEC2BQ92478 149 aa14.5□□□□□ -0.09
SDF4-205ENST00000465727 FAM208BQ5VWN6 2430 aa14.49□□□□□ -0.09
SDF4-205ENST00000465727 IMUPQ9GZP8 106 aa14.49□□□□□ -0.09
SDF4-205ENST00000465727 IGHV3OR16-10A0A075B7F0 116 aa14.48□□□□□ -0.09
SDF4-205ENST00000465727 TMEM101Q96IK0 257 aa14.48□□□□□ -0.09
SDF4-205ENST00000465727 SPTBN1Q01082 2364 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms