RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 UBE2WQ96B02 151 aa11.33□□□□□ -0.6
TOM1-213ENST00000465529 MED9Q9NWA0 146 aa11.33□□□□□ -0.6
TOM1-213ENST00000465529 A0A087WX48 190 aa11.32□□□□□ -0.6
TOM1-213ENST00000465529 TRBV6-8A0A0A6YYG3 113 aa11.32□□□□□ -0.6
TOM1-213ENST00000465529 C9orf62Q8N4C0 152 aa11.32□□□□□ -0.6
TOM1-213ENST00000465529 FER1L6-AS1Q8NA97 138 aa11.32□□□□□ -0.6
TOM1-213ENST00000465529 DAZAP1Q96EP5 407 aaKnown RBP11.32□□□□□ -0.6
TOM1-213ENST00000465529 AP1S3Q96PC3 154 aa11.32□□□□□ -0.6
TOM1-213ENST00000465529 TMEM262E9PQX1 116 aa11.31□□□□□ -0.6
TOM1-213ENST00000465529 PDE6DO43924 150 aa11.31□□□□□ -0.6
TOM1-213ENST00000465529 IFNA1P01562 189 aa11.31□□□□□ -0.6
TOM1-213ENST00000465529 MGPP08493 103 aa11.31□□□□□ -0.6
TOM1-213ENST00000465529 LINC01620Q4KN68 170 aa11.31□□□□□ -0.6
TOM1-213ENST00000465529 MPV17L2Q567V2 206 aa11.31□□□□□ -0.6
TOM1-213ENST00000465529 NTM-AS1Q6ZSK4 140 aa11.31□□□□□ -0.6
TOM1-213ENST00000465529 SMIM17P0DL12 118 aa11.3□□□□□ -0.6
TOM1-213ENST00000465529 AKAP14Q86UN6 197 aa11.3□□□□□ -0.6
TOM1-213ENST00000465529 VAX2Q9UIW0 290 aa11.3□□□□□ -0.6
TOM1-213ENST00000465529 P01737 135 aa11.29□□□□□ -0.6
TOM1-213ENST00000465529 ENHOQ6UWT2 76 aa11.29□□□□□ -0.6
TOM1-213ENST00000465529 C15orf54Q8N8G6 183 aa11.29□□□□□ -0.6
TOM1-213ENST00000465529 Q8N976 141 aa11.29□□□□□ -0.6
TOM1-213ENST00000465529 TMEM70Q9BUB7 260 aa11.29□□□□□ -0.6
TOM1-213ENST00000465529 CHCHD7Q9BUK0 85 aa11.29□□□□□ -0.6
TOM1-213ENST00000465529 RPS20P60866 119 aaKnown RBP11.28□□□□□ -0.6
TOM1-213ENST00000465529 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
TOM1-213ENST00000465529 KCNIP4Q6PIL6 250 aa11.28□□□□□ -0.6
TOM1-213ENST00000465529 LYZL1Q6UWQ5 148 aa11.28□□□□□ -0.6
TOM1-213ENST00000465529 ALKAL2Q6UX46 152 aa11.28□□□□□ -0.6
TOM1-213ENST00000465529 FRZBQ92765 325 aa11.28□□□□□ -0.6
TOM1-213ENST00000465529 SMIM12Q96EX1 92 aa11.28□□□□□ -0.6
TOM1-213ENST00000465529 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
TOM1-213ENST00000465529 K7EN84 100 aa11.27□□□□□ -0.61
TOM1-213ENST00000465529 M0QY20 66 aa11.27□□□□□ -0.61
TOM1-213ENST00000465529 NUDT10Q8NFP7 164 aa11.27□□□□□ -0.61
TOM1-213ENST00000465529 DEFB104AQ8WTQ1 72 aa11.27□□□□□ -0.61
TOM1-213ENST00000465529 RMI2Q96E14 147 aa11.27□□□□□ -0.61
TOM1-213ENST00000465529 NUDT11Q96G61 164 aa11.27□□□□□ -0.61
TOM1-213ENST00000465529 RNASE7Q9H1E1 156 aaKnown RBP11.27□□□□□ -0.61
TOM1-213ENST00000465529 ANGP03950 147 aaKnown RBP11.26□□□□□ -0.61
TOM1-213ENST00000465529 INAFM2P0DMQ5 153 aa11.26□□□□□ -0.61
TOM1-213ENST00000465529 CACNG7P62955 275 aa11.26□□□□□ -0.61
TOM1-213ENST00000465529 GAGE6Q13070 117 aa11.26□□□□□ -0.61
TOM1-213ENST00000465529 ELOBQ15370 118 aa11.26□□□□□ -0.61
TOM1-213ENST00000465529 ATRAIDQ6UW56 229 aa11.26□□□□□ -0.61
TOM1-213ENST00000465529 COX11Q9Y6N1 276 aa11.26□□□□□ -0.61
TOM1-213ENST00000465529 CLPSL2Q6UWE3 100 aa11.25□□□□□ -0.61
TOM1-213ENST00000465529 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
TOM1-213ENST00000465529 NTF3P20783 257 aa11.24□□□□□ -0.61
TOM1-213ENST00000465529 NKX2-5P52952 324 aaPredicted RBP11.24□□□□□ -0.61
TOM1-213ENST00000465529 XKRY2A2RUG3 117 aa11.23□□□□□ -0.61
TOM1-213ENST00000465529 CRPP02741 224 aa11.23□□□□□ -0.61
TOM1-213ENST00000465529 RBX1P62877 108 aa11.23□□□□□ -0.61
TOM1-213ENST00000465529 Q0VG73 95 aa11.23□□□□□ -0.61
TOM1-213ENST00000465529 Q6ZSA8 131 aa11.23□□□□□ -0.61
TOM1-213ENST00000465529 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.23□□□□□ -0.61
TOM1-213ENST00000465529 C1orf43Q9BWL3 253 aa11.23□□□□□ -0.61
TOM1-213ENST00000465529 F2Z2F3 143 aa11.22□□□□□ -0.61
TOM1-213ENST00000465529 CTRLP40313 264 aa11.22□□□□□ -0.61
TOM1-213ENST00000465529 HERC1Q15751 4861 aa11.22□□□□□ -0.61
TOM1-213ENST00000465529 DPH3P1Q9H4G8 78 aa11.22□□□□□ -0.61
TOM1-213ENST00000465529 RPP21Q9H633 154 aaKnown RBP11.22□□□□□ -0.61
TOM1-213ENST00000465529 BIN3Q9NQY0 253 aa11.22□□□□□ -0.61
TOM1-213ENST00000465529 MYCBP2O75592 4640 aa11.21□□□□□ -0.61
TOM1-213ENST00000465529 TRBV25-1A0A075B6N4 114 aa11.21□□□□□ -0.61
TOM1-213ENST00000465529 A0A1B0GVG6 124 aa11.21□□□□□ -0.61
TOM1-213ENST00000465529 HLA-DQA1P01909 254 aa11.21□□□□□ -0.61
TOM1-213ENST00000465529 TRGC1P0CF51 173 aa11.21□□□□□ -0.61
TOM1-213ENST00000465529 TAGLN2P37802 199 aaKnown RBP11.21□□□□□ -0.61
TOM1-213ENST00000465529 IQCJQ1A5X6 159 aa11.21□□□□□ -0.61
TOM1-213ENST00000465529 RASL11AQ6T310 242 aa11.21□□□□□ -0.61
TOM1-213ENST00000465529 IGHV1-24A0A0C4DH33 117 aa11.2□□□□□ -0.62
TOM1-213ENST00000465529 H7C1H1 209 aa11.2□□□□□ -0.62
TOM1-213ENST00000465529 CEBPGP53567 150 aa11.2□□□□□ -0.62
TOM1-213ENST00000465529 BLOC1S1P78537 153 aa11.2□□□□□ -0.62
TOM1-213ENST00000465529 TWIST1Q15672 202 aa11.2□□□□□ -0.62
TOM1-213ENST00000465529 TMEM97Q5BJF2 176 aa11.2□□□□□ -0.62
TOM1-213ENST00000465529 LINC00269Q8N2A0 174 aa11.2□□□□□ -0.62
TOM1-213ENST00000465529 GTSF1Q8WW33 167 aa11.2□□□□□ -0.62
TOM1-213ENST00000465529 FLG2Q5D862 2391 aaPredicted RBP11.19□□□□□ -0.62
TOM1-213ENST00000465529 TRAV26-2A0A0B4J265 109 aa11.19□□□□□ -0.62
TOM1-213ENST00000465529 FAM229AH3BQW9 127 aa11.19□□□□□ -0.62
TOM1-213ENST00000465529 FOXA3P55318 350 aaPredicted RBP11.19□□□□□ -0.62
TOM1-213ENST00000465529 LYPD6BQ8NI32 183 aa11.19□□□□□ -0.62
TOM1-213ENST00000465529 PRR34Q9NV39 138 aa11.19□□□□□ -0.62
TOM1-213ENST00000465529 SRRM2Q9UQ35 2752 aaKnown RBP11.19□□□□□ -0.62
TOM1-213ENST00000465529 USP17L23D6RBM5 183 aa11.18□□□□□ -0.62
TOM1-213ENST00000465529 KRTAP26-1Q6PEX3 210 aa11.18□□□□□ -0.62
TOM1-213ENST00000465529 CNFNQ9BYD5 112 aa11.18□□□□□ -0.62
TOM1-213ENST00000465529 GFRA4Q9GZZ7 299 aa11.18□□□□□ -0.62
TOM1-213ENST00000465529 IGLV4-60A0A075B6I1 120 aa11.17□□□□□ -0.62
TOM1-213ENST00000465529 IGLV10-54A0A075B6I4 117 aa11.17□□□□□ -0.62
TOM1-213ENST00000465529 TMEM250H0YL14 139 aa11.17□□□□□ -0.62
TOM1-213ENST00000465529 PKIAP61925 76 aa11.17□□□□□ -0.62
TOM1-213ENST00000465529 MIAQ16674 131 aa11.17□□□□□ -0.62
TOM1-213ENST00000465529 WDR73Q6P4I2 378 aa11.17□□□□□ -0.62
TOM1-213ENST00000465529 SCXQ7RTU7 201 aa11.17□□□□□ -0.62
TOM1-213ENST00000465529 GATD1Q8NB37 220 aa11.17□□□□□ -0.62
TOM1-213ENST00000465529 C20orf203Q8NBC4 194 aa11.17□□□□□ -0.62
TOM1-213ENST00000465529 NIT2Q9NQR4 276 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms