RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ZNF142P52746 1687 aaPredicted RBP0.76□□□□□ -2.29
CLK1-208ENST00000464454 ABCC10Q5T3U5 1492 aa0.76□□□□□ -2.29
CLK1-208ENST00000464454 C10orf71Q711Q0 1435 aa0.76□□□□□ -2.29
CLK1-208ENST00000464454 TRAV12-3A0A0B4J271 114 aa0.76□□□□□ -2.29
CLK1-208ENST00000464454 TRBV10-3A0A0K0K1G6 114 aa0.76□□□□□ -2.29
CLK1-208ENST00000464454 M0R143 59 aa0.76□□□□□ -2.29
CLK1-208ENST00000464454 MPC2O95563 127 aa0.76□□□□□ -2.29
CLK1-208ENST00000464454 SPINK8P0C7L1 97 aa0.76□□□□□ -2.29
CLK1-208ENST00000464454 IL7P13232 177 aa0.76□□□□□ -2.29
CLK1-208ENST00000464454 C9orf153Q5TBE3 101 aa0.76□□□□□ -2.29
CLK1-208ENST00000464454 UNQ5815/PRO19632Q6UWF5 114 aa0.76□□□□□ -2.29
CLK1-208ENST00000464454 C5orf56Q8N8D9 126 aa0.76□□□□□ -2.29
CLK1-208ENST00000464454 ANK1P16157 1881 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 NRKQ7Z2Y5 1582 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 TEX14Q8IWB6 1497 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 CPSF1Q10570 1443 aaKnown RBP0.75□□□□□ -2.29
CLK1-208ENST00000464454 ZDBF2Q9HCK1 2354 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 KIAA0100Q14667 2235 aaKnown RBP0.75□□□□□ -2.29
CLK1-208ENST00000464454 A0A087WTM6 91 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 A0A096LNT2 108 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 TRAV17A0A0B4J275 112 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 UBE2L5PA0A1B0GUS4 154 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 LOC101927531A0A1B0GV80 90 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 HCG22E2RYF7 251 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 SNAPC5O75971 98 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 SNCGO76070 127 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 CCL3L1P16619 93 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 ATP5EP56381 51 aaPredicted RBP0.75□□□□□ -2.29
CLK1-208ENST00000464454 RPL37AP61513 92 aaKnown RBP0.75□□□□□ -2.29
CLK1-208ENST00000464454 PKIAP61925 76 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 UBE2L3P68036 154 aaKnown RBP0.75□□□□□ -2.29
CLK1-208ENST00000464454 DCDP81605 110 aaKnown RBP0.75□□□□□ -2.29
CLK1-208ENST00000464454 FXYD3Q14802 87 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 GTF2H5Q6ZYL4 71 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 C10orf82Q8WW14 230 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 SNHG12Q9BXW3 62 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 MYH7P12883 1935 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 MUC22E2RYF6 1773 aaPredicted RBP0.75□□□□□ -2.29
CLK1-208ENST00000464454 CUL7Q14999 1698 aa0.75□□□□□ -2.29
CLK1-208ENST00000464454 SPAG17Q6Q759 2223 aa0.74□□□□□ -2.29
CLK1-208ENST00000464454 TRAV13-2A0A0B4J235 113 aa0.74□□□□□ -2.29
CLK1-208ENST00000464454 PIGBOS1A0A0B4J2F0 54 aa0.74□□□□□ -2.29
CLK1-208ENST00000464454 PVALEFA0A1B0GWK0 134 aa0.74□□□□□ -2.29
CLK1-208ENST00000464454 KLKP1Q107X0 134 aa0.74□□□□□ -2.29
CLK1-208ENST00000464454 NCMAPQ5T1S8 102 aa0.74□□□□□ -2.29
CLK1-208ENST00000464454 LINC00208Q96KT6 92 aa0.74□□□□□ -2.29
CLK1-208ENST00000464454 LINC00474Q9P2X8 69 aa0.74□□□□□ -2.29
CLK1-208ENST00000464454 LINC00312Q9Y6C7 94 aa0.74□□□□□ -2.29
CLK1-208ENST00000464454 SCRIBQ14160 1630 aa0.74□□□□□ -2.29
CLK1-208ENST00000464454 ZNF462Q96JM2 2506 aa0.74□□□□□ -2.29
CLK1-208ENST00000464454 ADGRL2O95490 1459 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 CDK12Q9NYV4 1490 aaPredicted RBP0.73□□□□□ -2.29
CLK1-208ENST00000464454 TENM3Q9P273 2699 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 SPTBP11277 2137 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 SPHKAPQ2M3C7 1700 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 TRBV7-1A0A0A6YYK4 115 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 TRBV30A0A0K0K1B3 111 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 FAM24AA6NFZ4 105 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 ELOF1P60002 83 aaKnown RBP0.73□□□□□ -2.29
CLK1-208ENST00000464454 SSBP1Q04837 148 aaKnown RBP0.73□□□□□ -2.29
CLK1-208ENST00000464454 ZNF56Q15929 161 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 Q5VV11 94 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 Q86TA4 180 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 SVBPQ8N300 66 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 ABCA4P78363 2273 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 DLEC1Q9Y238 1755 aa0.73□□□□□ -2.29
CLK1-208ENST00000464454 ABCC5O15440 1437 aa0.72□□□□□ -2.29
CLK1-208ENST00000464454 SHROOM2Q13796 1616 aa0.72□□□□□ -2.29
CLK1-208ENST00000464454 TRPM7Q96QT4 1865 aa0.72□□□□□ -2.29
CLK1-208ENST00000464454 RBAKDNA6NC62 111 aa0.72□□□□□ -2.29
CLK1-208ENST00000464454 A6NIN4 97 aa0.72□□□□□ -2.29
CLK1-208ENST00000464454 K7EIL1 84 aa0.72□□□□□ -2.29
CLK1-208ENST00000464454 RBM3P98179 157 aaKnown RBP0.72□□□□□ -2.29
CLK1-208ENST00000464454 Q6ZQY7 126 aa0.72□□□□□ -2.29
CLK1-208ENST00000464454 KRTAP19-3Q7Z4W3 81 aa0.72□□□□□ -2.29
CLK1-208ENST00000464454 BET1LQ9NYM9 111 aa0.72□□□□□ -2.29
CLK1-208ENST00000464454 PRDM15P57071 1507 aaPredicted RBP0.72□□□□□ -2.29
CLK1-208ENST00000464454 MYH9P35579 1960 aaKnown RBP0.72□□□□□ -2.29
CLK1-208ENST00000464454 ROBO1Q9Y6N7 1651 aa0.72□□□□□ -2.29
CLK1-208ENST00000464454 TTC37Q6PGP7 1564 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 ARHGAP5Q13017 1502 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 TFF1P04155 84 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 CAV3P56539 151 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 Q0VG73 95 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 SPINK9Q5DT21 86 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 COL5A1-AS1Q5SY13 56 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 C6orf52Q5T4I8 152 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 C20orf197Q8N268 126 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 COX7B2Q8TF08 81 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 PPP1R1CQ8WVI7 109 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 FAM167A-AS1Q96KT0 104 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 CCL19Q99731 98 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 WFDC6Q9BQY6 131 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 DPY30Q9C005 99 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 GAPVD1Q14C86 1478 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 MAGI1Q96QZ7 1491 aaPredicted RBP0.71□□□□□ -2.3
CLK1-208ENST00000464454 SCAPERQ9BY12 1400 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 LRRC37A3O60309 1634 aa0.71□□□□□ -2.3
CLK1-208ENST00000464454 TRBV7-3A0A075B6L6 115 aa0.7□□□□□ -2.3
CLK1-208ENST00000464454 MT-ATP8P03928 68 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms