RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 A0A1B0GXF2 115 aa10.23□□□□□ -0.77
CHRNA4-202ENST00000463705 ANKRD39Q53RE8 183 aa10.23□□□□□ -0.77
CHRNA4-202ENST00000463705 E9PLD3 99 aa10.23□□□□□ -0.77
CHRNA4-202ENST00000463705 DEFB1P60022 68 aa10.23□□□□□ -0.77
CHRNA4-202ENST00000463705 AMTNQ6UX39 209 aa10.22□□□□□ -0.77
CHRNA4-202ENST00000463705 IGLV2-8P01709 118 aa10.22□□□□□ -0.77
CHRNA4-202ENST00000463705 LINC01548A6NM66 108 aa10.22□□□□□ -0.77
CHRNA4-202ENST00000463705 UBE2BP63146 152 aa10.21□□□□□ -0.77
CHRNA4-202ENST00000463705 CHD3Q12873 2000 aaKnown RBP10.21□□□□□ -0.77
CHRNA4-202ENST00000463705 Q9HAA7 133 aa10.21□□□□□ -0.77
CHRNA4-202ENST00000463705 IGLL5B9A064 214 aa10.21□□□□□ -0.78
CHRNA4-202ENST00000463705 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.78
CHRNA4-202ENST00000463705 SND1-IT1Q9HBX3 110 aa10.21□□□□□ -0.78
CHRNA4-202ENST00000463705 SMAD5-AS1Q9Y6J3 95 aa10.21□□□□□ -0.78
CHRNA4-202ENST00000463705 ACYP1P07311 99 aa10.21□□□□□ -0.78
CHRNA4-202ENST00000463705 VSIG2Q96IQ7 327 aa10.21□□□□□ -0.78
CHRNA4-202ENST00000463705 CITED1Q99966 193 aa10.21□□□□□ -0.78
CHRNA4-202ENST00000463705 C20orf203Q8NBC4 194 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 CEP192Q8TEP8 1941 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 MUSTN1Q8IVN3 82 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 BAALC-AS2P0C853 105 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 MDFICQ9P1T7 246 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 CSPG4Q6UVK1 2322 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 NDUFA1O15239 70 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 K7EQG2 157 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 IGHV3-30P01768 117 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 IGHV3-33P01772 117 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 IGLC6P0CF74 106 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 IGHV3-30-3P0DP02 117 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 IGHV3-30-5P0DP03 117 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 HAMPP81172 84 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 PRO0255Q9UI72 69 aa10.2□□□□□ -0.78
CHRNA4-202ENST00000463705 RPL18AQ02543 176 aaKnown RBP10.19□□□□□ -0.78
CHRNA4-202ENST00000463705 DEFB135Q30KP9 77 aa10.19□□□□□ -0.78
CHRNA4-202ENST00000463705 NTN5Q8WTR8 489 aaPredicted RBP10.19□□□□□ -0.78
CHRNA4-202ENST00000463705 MLST8Q9BVC4 326 aa10.19□□□□□ -0.78
CHRNA4-202ENST00000463705 F8W735 103 aaPredicted RBP10.19□□□□□ -0.78
CHRNA4-202ENST00000463705 ODF1Q14990 250 aa10.19□□□□□ -0.78
CHRNA4-202ENST00000463705 LINC00322Q6ZN03 302 aaPredicted RBP10.19□□□□□ -0.78
CHRNA4-202ENST00000463705 TM2D2Q9BX73 214 aa10.19□□□□□ -0.78
CHRNA4-202ENST00000463705 ARHGAP21Q5T5U3 1957 aa10.19□□□□□ -0.78
CHRNA4-202ENST00000463705 TNRC6AQ8NDV7 1962 aaKnown RBP10.19□□□□□ -0.78
CHRNA4-202ENST00000463705 HIST2H2BCQ6DN03 193 aa10.19□□□□□ -0.78
CHRNA4-202ENST00000463705 ETDCA0A1B0GVM5 59 aa10.18□□□□□ -0.78
CHRNA4-202ENST00000463705 SMIM9A6NGZ8 99 aa10.18□□□□□ -0.78
CHRNA4-202ENST00000463705 ZNF80P51504 273 aaPredicted RBP10.18□□□□□ -0.78
CHRNA4-202ENST00000463705 SPATA12Q7Z6I5 190 aa10.18□□□□□ -0.78
CHRNA4-202ENST00000463705 C9orf153Q5TBE3 101 aa10.18□□□□□ -0.78
CHRNA4-202ENST00000463705 ANKRD29Q8N6D5 301 aa10.18□□□□□ -0.78
CHRNA4-202ENST00000463705 A4D1N5 150 aa10.18□□□□□ -0.78
CHRNA4-202ENST00000463705 GAGE12HA6NDE8 117 aa10.18□□□□□ -0.78
CHRNA4-202ENST00000463705 ZFAND3Q9H8U3 227 aa10.17□□□□□ -0.78
CHRNA4-202ENST00000463705 IGHV1-58A0A0C4DH39 117 aa10.17□□□□□ -0.78
CHRNA4-202ENST00000463705 PTPRSQ13332 1948 aa10.17□□□□□ -0.78
CHRNA4-202ENST00000463705 TNCP24821 2201 aa10.17□□□□□ -0.78
CHRNA4-202ENST00000463705 IGLV10-54A0A075B6I4 117 aa10.17□□□□□ -0.78
CHRNA4-202ENST00000463705 TIRAPP58753 221 aa10.16□□□□□ -0.78
CHRNA4-202ENST00000463705 DEFB114Q30KQ6 69 aa10.16□□□□□ -0.78
CHRNA4-202ENST00000463705 Q8N6K4 173 aa10.16□□□□□ -0.78
CHRNA4-202ENST00000463705 C15orf53Q8NAA6 179 aa10.15□□□□□ -0.78
CHRNA4-202ENST00000463705 KLK5Q9Y337 293 aaPredicted RBP10.15□□□□□ -0.78
CHRNA4-202ENST00000463705 ZNF843Q8N446 348 aa10.15□□□□□ -0.78
CHRNA4-202ENST00000463705 LYRM9A8MSI8 78 aa10.15□□□□□ -0.78
CHRNA4-202ENST00000463705 H7C423 109 aa10.15□□□□□ -0.78
CHRNA4-202ENST00000463705 HIVEP2P31629 2446 aa10.15□□□□□ -0.79
CHRNA4-202ENST00000463705 OPRPNQ99935 248 aaPredicted RBP10.15□□□□□ -0.79
CHRNA4-202ENST00000463705 TINCRA0A1B0GVN0 87 aa10.14□□□□□ -0.79
CHRNA4-202ENST00000463705 CCL25O15444 150 aa10.14□□□□□ -0.79
CHRNA4-202ENST00000463705 MBD6Q96DN6 1003 aa10.14□□□□□ -0.79
CHRNA4-202ENST00000463705 SPAG11BQ08648 103 aa10.13□□□□□ -0.79
CHRNA4-202ENST00000463705 IL17DQ8TAD2 202 aa10.13□□□□□ -0.79
CHRNA4-202ENST00000463705 TTTY13Q9BZ97 58 aa10.13□□□□□ -0.79
CHRNA4-202ENST00000463705 FUSP35637 526 aaKnown RBP eCLIP10.13□□□□□ -0.79
CHRNA4-202ENST00000463705 GDF5OSQ5U4N7 250 aa10.13□□□□□ -0.79
CHRNA4-202ENST00000463705 WFDC11Q8NEX6 87 aa10.13□□□□□ -0.79
CHRNA4-202ENST00000463705 PSMG3-AS1Q96PY0 264 aa10.13□□□□□ -0.79
CHRNA4-202ENST00000463705 C20orf173Q96LM9 149 aa10.12□□□□□ -0.79
CHRNA4-202ENST00000463705 FXYD2P54710 66 aa10.12□□□□□ -0.79
CHRNA4-202ENST00000463705 CRYBA4P53673 196 aa10.12□□□□□ -0.79
CHRNA4-202ENST00000463705 ESM1Q9NQ30 184 aa10.12□□□□□ -0.79
CHRNA4-202ENST00000463705 SPANXCQ9NY87 97 aa10.12□□□□□ -0.79
CHRNA4-202ENST00000463705 LINC01620Q4KN68 170 aa10.11□□□□□ -0.79
CHRNA4-202ENST00000463705 Q6ZSV7 163 aa10.11□□□□□ -0.79
CHRNA4-202ENST00000463705 NCOR2Q9Y618 2525 aa10.11□□□□□ -0.79
CHRNA4-202ENST00000463705 TP53TG3Q9ULZ0 132 aa10.1□□□□□ -0.79
CHRNA4-202ENST00000463705 LRP4O75096 1905 aa10.1□□□□□ -0.79
CHRNA4-202ENST00000463705 PSMB8P28062 276 aa10.1□□□□□ -0.79
CHRNA4-202ENST00000463705 Q6ZUT4 128 aa10.1□□□□□ -0.79
CHRNA4-202ENST00000463705 PTPN13Q12923 2485 aa10.1□□□□□ -0.79
CHRNA4-202ENST00000463705 DEFB105AQ8NG35 78 aa10.1□□□□□ -0.79
CHRNA4-202ENST00000463705 KLK12Q9UKR0 248 aa10.1□□□□□ -0.79
CHRNA4-202ENST00000463705 ZNF702PQ9H963 129 aa10.09□□□□□ -0.79
CHRNA4-202ENST00000463705 DEFB4AO15263 64 aa10.09□□□□□ -0.79
CHRNA4-202ENST00000463705 Q6ZTI0 123 aa10.09□□□□□ -0.79
CHRNA4-202ENST00000463705 U3KQK5 164 aa10.09□□□□□ -0.79
CHRNA4-202ENST00000463705 DSCAMO60469 2012 aa10.09□□□□□ -0.79
CHRNA4-202ENST00000463705 TEN1Q86WV5 123 aa10.08□□□□□ -0.8
CHRNA4-202ENST00000463705 JMJD7-PLA2G4BH0Y9G9 81 aa10.08□□□□□ -0.8
CHRNA4-202ENST00000463705 MIAQ16674 131 aa10.08□□□□□ -0.8
CHRNA4-202ENST00000463705 ZFAND2AQ8N6M9 145 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms