RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 PKIAP61925 76 aa13.5□□□□□ -0.25
PDLIM4-205ENST00000463615 HAMPP81172 84 aa13.5□□□□□ -0.25
PDLIM4-205ENST00000463615 TMEM97Q5BJF2 176 aa13.5□□□□□ -0.25
PDLIM4-205ENST00000463615 CENPWQ5EE01 88 aa13.5□□□□□ -0.25
PDLIM4-205ENST00000463615 TCTE3Q8IZS6 198 aa13.5□□□□□ -0.25
PDLIM4-205ENST00000463615 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.5□□□□□ -0.25
PDLIM4-205ENST00000463615 AP1S3Q96PC3 154 aa13.5□□□□□ -0.25
PDLIM4-205ENST00000463615 HERC1Q15751 4861 aa13.49□□□□□ -0.25
PDLIM4-205ENST00000463615 RBFOX3A6NFN3 312 aa13.49□□□□□ -0.25
PDLIM4-205ENST00000463615 RPS20P60866 119 aaKnown RBP13.49□□□□□ -0.25
PDLIM4-205ENST00000463615 MUC21A0A0G2JKD1 596 aa13.48□□□□□ -0.25
PDLIM4-205ENST00000463615 MUC21A0A140T8X8 626 aa13.48□□□□□ -0.25
PDLIM4-205ENST00000463615 PDE6DO43924 150 aa13.48□□□□□ -0.25
PDLIM4-205ENST00000463615 MEF2BQ02080 365 aaPredicted RBP13.48□□□□□ -0.25
PDLIM4-205ENST00000463615 MYCBP2O75592 4640 aa13.48□□□□□ -0.25
PDLIM4-205ENST00000463615 ENHOQ6UWT2 76 aa13.47□□□□□ -0.25
PDLIM4-205ENST00000463615 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.46□□□□□ -0.25
PDLIM4-205ENST00000463615 TMEM262E9PQX1 116 aa13.46□□□□□ -0.25
PDLIM4-205ENST00000463615 F5H697 171 aa13.46□□□□□ -0.25
PDLIM4-205ENST00000463615 SMIM17P0DL12 118 aa13.46□□□□□ -0.25
PDLIM4-205ENST00000463615 MPV17L2Q567V2 206 aa13.46□□□□□ -0.25
PDLIM4-205ENST00000463615 NTM-AS1Q6ZSK4 140 aa13.46□□□□□ -0.25
PDLIM4-205ENST00000463615 FER1L6-AS1Q8NA97 138 aa13.46□□□□□ -0.25
PDLIM4-205ENST00000463615 FLG2Q5D862 2391 aaPredicted RBP13.46□□□□□ -0.25
PDLIM4-205ENST00000463615 GNG4P50150 75 aa13.45□□□□□ -0.26
PDLIM4-205ENST00000463615 CACNG7P62955 275 aa13.45□□□□□ -0.26
PDLIM4-205ENST00000463615 SLC51BQ86UW2 128 aa13.45□□□□□ -0.26
PDLIM4-205ENST00000463615 OR2D3Q8NGH3 330 aa13.45□□□□□ -0.26
PDLIM4-205ENST00000463615 DAZAP1Q96EP5 407 aaKnown RBP13.45□□□□□ -0.26
PDLIM4-205ENST00000463615 BIN3Q9NQY0 253 aa13.45□□□□□ -0.26
PDLIM4-205ENST00000463615 TRBV20OR9-2A0A075B6H5 130 aa13.44□□□□□ -0.26
PDLIM4-205ENST00000463615 RAB19A4D1S5 217 aa13.44□□□□□ -0.26
PDLIM4-205ENST00000463615 F2Z2F3 143 aa13.44□□□□□ -0.26
PDLIM4-205ENST00000463615 M0QY20 66 aa13.44□□□□□ -0.26
PDLIM4-205ENST00000463615 IFNA1P01562 189 aa13.44□□□□□ -0.26
PDLIM4-205ENST00000463615 BCL2P10415 239 aa13.44□□□□□ -0.26
PDLIM4-205ENST00000463615 C1orf43Q9BWL3 253 aa13.44□□□□□ -0.26
PDLIM4-205ENST00000463615 XKRY2A2RUG3 117 aa13.43□□□□□ -0.26
PDLIM4-205ENST00000463615 GZMBP10144 247 aa13.43□□□□□ -0.26
PDLIM4-205ENST00000463615 TAGLN2P37802 199 aaKnown RBP13.43□□□□□ -0.26
PDLIM4-205ENST00000463615 MIAQ16674 131 aa13.43□□□□□ -0.26
PDLIM4-205ENST00000463615 IQCJQ1A5X6 159 aa13.43□□□□□ -0.26
PDLIM4-205ENST00000463615 C14orf177Q52M58 125 aa13.43□□□□□ -0.26
PDLIM4-205ENST00000463615 CHCHD5Q9BSY4 110 aa13.43□□□□□ -0.26
PDLIM4-205ENST00000463615 PRR34Q9NV39 138 aa13.43□□□□□ -0.26
PDLIM4-205ENST00000463615 H7C1H1 209 aa13.42□□□□□ -0.26
PDLIM4-205ENST00000463615 CRPP02741 224 aa13.42□□□□□ -0.26
PDLIM4-205ENST00000463615 C15orf54Q8N8G6 183 aa13.42□□□□□ -0.26
PDLIM4-205ENST00000463615 MED9Q9NWA0 146 aa13.42□□□□□ -0.26
PDLIM4-205ENST00000463615 P01737 135 aa13.41□□□□□ -0.26
PDLIM4-205ENST00000463615 ANGP03950 147 aaKnown RBP13.41□□□□□ -0.26
PDLIM4-205ENST00000463615 SSTP61278 116 aa13.41□□□□□ -0.26
PDLIM4-205ENST00000463615 WDR73Q6P4I2 378 aa13.41□□□□□ -0.26
PDLIM4-205ENST00000463615 TRBV25-1A0A075B6N4 114 aa13.4□□□□□ -0.26
PDLIM4-205ENST00000463615 SUMO4Q6EEV6 95 aa13.4□□□□□ -0.26
PDLIM4-205ENST00000463615 C9orf62Q8N4C0 152 aa13.4□□□□□ -0.26
PDLIM4-205ENST00000463615 PLA2G1BP04054 148 aaKnown RBP13.39□□□□□ -0.27
PDLIM4-205ENST00000463615 TRGC1P0CF51 173 aa13.39□□□□□ -0.27
PDLIM4-205ENST00000463615 RBX1P62877 108 aa13.39□□□□□ -0.27
PDLIM4-205ENST00000463615 LINC01620Q4KN68 170 aa13.39□□□□□ -0.27
PDLIM4-205ENST00000463615 TPPP3Q9BW30 176 aa13.39□□□□□ -0.27
PDLIM4-205ENST00000463615 CNFNQ9BYD5 112 aa13.39□□□□□ -0.27
PDLIM4-205ENST00000463615 CTRLP40313 264 aa13.38□□□□□ -0.27
PDLIM4-205ENST00000463615 KRTAP26-1Q6PEX3 210 aa13.38□□□□□ -0.27
PDLIM4-205ENST00000463615 SCXQ7RTU7 201 aa13.38□□□□□ -0.27
PDLIM4-205ENST00000463615 LINC00528Q8N1L1 170 aa13.38□□□□□ -0.27
PDLIM4-205ENST00000463615 CHAC1Q9BUX1 264 aa13.38□□□□□ -0.27
PDLIM4-205ENST00000463615 IGHV1-24A0A0C4DH33 117 aa13.37□□□□□ -0.27
PDLIM4-205ENST00000463615 MGPP08493 103 aa13.37□□□□□ -0.27
PDLIM4-205ENST00000463615 RASL11AQ6T310 242 aa13.37□□□□□ -0.27
PDLIM4-205ENST00000463615 LYZL1Q6UWQ5 148 aa13.37□□□□□ -0.27
PDLIM4-205ENST00000463615 Q6ZNX1 250 aa13.37□□□□□ -0.27
PDLIM4-205ENST00000463615 NUDT10Q8NFP7 164 aa13.37□□□□□ -0.27
PDLIM4-205ENST00000463615 NUDT11Q96G61 164 aa13.37□□□□□ -0.27
PDLIM4-205ENST00000463615 NTF3P20783 257 aa13.36□□□□□ -0.27
PDLIM4-205ENST00000463615 PGLYRP4Q96LB8 373 aa13.36□□□□□ -0.27
PDLIM4-205ENST00000463615 DPH3P1Q9H4G8 78 aa13.36□□□□□ -0.27
PDLIM4-205ENST00000463615 A0A1B0GUV1 79 aa13.35□□□□□ -0.27
PDLIM4-205ENST00000463615 USP17L23D6RBM5 183 aa13.35□□□□□ -0.27
PDLIM4-205ENST00000463615 GAGE6Q13070 117 aa13.35□□□□□ -0.27
PDLIM4-205ENST00000463615 NIT2Q9NQR4 276 aa13.35□□□□□ -0.27
PDLIM4-205ENST00000463615 LINC00269Q8N2A0 174 aa13.34□□□□□ -0.27
PDLIM4-205ENST00000463615 NKX2-5P52952 324 aaPredicted RBP13.33□□□□□ -0.28
PDLIM4-205ENST00000463615 DGAT2L7PQ6IED9 249 aa13.33□□□□□ -0.28
PDLIM4-205ENST00000463615 CIRBP-AS1Q8TBR5 109 aa13.33□□□□□ -0.28
PDLIM4-205ENST00000463615 RPP21Q9H633 154 aaKnown RBP13.33□□□□□ -0.28
PDLIM4-205ENST00000463615 K7EN84 100 aa13.32□□□□□ -0.28
PDLIM4-205ENST00000463615 C20orf203Q8NBC4 194 aa13.32□□□□□ -0.28
PDLIM4-205ENST00000463615 OCC1Q8TAD7 63 aa13.32□□□□□ -0.28
PDLIM4-205ENST00000463615 TMEM243Q9BU79 118 aa13.32□□□□□ -0.28
PDLIM4-205ENST00000463615 TMEM250H0YL14 139 aa13.31□□□□□ -0.28
PDLIM4-205ENST00000463615 HLA-DQA1P01909 254 aa13.31□□□□□ -0.28
PDLIM4-205ENST00000463615 PRSS1P07477 247 aa13.31□□□□□ -0.28
PDLIM4-205ENST00000463615 REG3AQ06141 175 aa13.31□□□□□ -0.28
PDLIM4-205ENST00000463615 LYPD6BQ8NI32 183 aa13.31□□□□□ -0.28
PDLIM4-205ENST00000463615 TRAV8-4A0A0B4J246 113 aa13.3□□□□□ -0.28
PDLIM4-205ENST00000463615 KRTAP10-4P60372 401 aaPredicted RBP13.3□□□□□ -0.28
PDLIM4-205ENST00000463615 C9orf163Q8N9P6 203 aa13.3□□□□□ -0.28
PDLIM4-205ENST00000463615 DEFB104AQ8WTQ1 72 aa13.3□□□□□ -0.28
PDLIM4-205ENST00000463615 RNASE7Q9H1E1 156 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms