RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 TOMM6Q96B49 74 aa9.7□□□□□ -0.86
NUP58-206ENST00000463407 SMR3AQ99954 134 aa9.7□□□□□ -0.86
NUP58-206ENST00000463407 SPAG11BQ08648 103 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 Q6ZTI0 123 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 LINC00173Q6ZV60 143 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 OTOGLQ3ZCN5 2332 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 PTPRSQ13332 1948 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 SMIM9A6NGZ8 99 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 TTC28Q96AY4 2481 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 LYRM9A8MSI8 78 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 ZNF124Q15973 351 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 LINC01006Q8NI28 216 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 F8W1H4 67 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.69□□□□□ -0.86
NUP58-206ENST00000463407 PSMG3-AS1Q96PY0 264 aa9.69□□□□□ -0.86
NUP58-206ENST00000463407 GAGE12HA6NDE8 117 aa9.68□□□□□ -0.86
NUP58-206ENST00000463407 CCL25O15444 150 aa9.68□□□□□ -0.86
NUP58-206ENST00000463407 BAALCQ8WXS3 180 aa9.68□□□□□ -0.86
NUP58-206ENST00000463407 CRYGBP07316 175 aa9.68□□□□□ -0.86
NUP58-206ENST00000463407 TRAV12-1A0A0B4J245 112 aa9.68□□□□□ -0.86
NUP58-206ENST00000463407 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
NUP58-206ENST00000463407 SND1-IT1Q9HBX3 110 aa9.68□□□□□ -0.86
NUP58-206ENST00000463407 K7EQG2 157 aa9.68□□□□□ -0.86
NUP58-206ENST00000463407 BDP1A6H8Y1 2624 aa9.67□□□□□ -0.86
NUP58-206ENST00000463407 EBI3Q14213 229 aa9.67□□□□□ -0.86
NUP58-206ENST00000463407 C14orf177Q52M58 125 aa9.67□□□□□ -0.86
NUP58-206ENST00000463407 PPDPFLQ8WWR9 84 aa9.67□□□□□ -0.86
NUP58-206ENST00000463407 CFC1BP0CG36 223 aa9.67□□□□□ -0.86
NUP58-206ENST00000463407 CFC1P0CG37 223 aa9.67□□□□□ -0.86
NUP58-206ENST00000463407 EIF4EBP1Q13541 118 aaPredicted RBP9.67□□□□□ -0.86
NUP58-206ENST00000463407 CREBBPQ92793 2442 aa9.67□□□□□ -0.86
NUP58-206ENST00000463407 ORMDL1Q9P0S3 153 aa9.67□□□□□ -0.86
NUP58-206ENST00000463407 HIVEP2P31629 2446 aa9.67□□□□□ -0.86
NUP58-206ENST00000463407 NUPR1O60356 82 aa9.67□□□□□ -0.86
NUP58-206ENST00000463407 CRYGDP07320 174 aa9.66□□□□□ -0.86
NUP58-206ENST00000463407 DSCAMO60469 2012 aa9.66□□□□□ -0.86
NUP58-206ENST00000463407 KRTAP10-9P60411 292 aa9.66□□□□□ -0.86
NUP58-206ENST00000463407 C20orf173Q96LM9 149 aa9.66□□□□□ -0.86
NUP58-206ENST00000463407 FREM1Q5H8C1 2179 aa9.66□□□□□ -0.86
NUP58-206ENST00000463407 P0DMU3 169 aa9.66□□□□□ -0.86
NUP58-206ENST00000463407 FAM231AP0DMU4 169 aa9.66□□□□□ -0.86
NUP58-206ENST00000463407 FAM231CP0DMU5 169 aa9.66□□□□□ -0.86
NUP58-206ENST00000463407 H3BMG7 143 aa9.66□□□□□ -0.86
NUP58-206ENST00000463407 HIGD2BQ4VC39 106 aa9.66□□□□□ -0.86
NUP58-206ENST00000463407 C19orf71A6NCJ1 209 aa9.65□□□□□ -0.86
NUP58-206ENST00000463407 ODF3Q96PU9 254 aa9.65□□□□□ -0.86
NUP58-206ENST00000463407 MUSTN1Q8IVN3 82 aa9.65□□□□□ -0.86
NUP58-206ENST00000463407 TRBV10-1A0A0K0K1A3 114 aa9.65□□□□□ -0.86
NUP58-206ENST00000463407 CXCL5P42830 114 aa9.65□□□□□ -0.86
NUP58-206ENST00000463407 C18orf65Q6ZTR6 163 aa9.65□□□□□ -0.86
NUP58-206ENST00000463407 IGKV2-24A0A0C4DH68 120 aa9.65□□□□□ -0.86
NUP58-206ENST00000463407 ZNF80P51504 273 aaPredicted RBP9.65□□□□□ -0.86
NUP58-206ENST00000463407 CHD3Q12873 2000 aaKnown RBP9.64□□□□□ -0.87
NUP58-206ENST00000463407 LINC01545Q5VT33 79 aa9.64□□□□□ -0.87
NUP58-206ENST00000463407 MIFP14174 115 aa9.64□□□□□ -0.87
NUP58-206ENST00000463407 PSMB8P28062 276 aa9.64□□□□□ -0.87
NUP58-206ENST00000463407 NOTCH3Q9UM47 2321 aa9.64□□□□□ -0.87
NUP58-206ENST00000463407 LINC00269Q8N2A0 174 aa9.64□□□□□ -0.87
NUP58-206ENST00000463407 DAND5Q8N907 189 aa9.64□□□□□ -0.87
NUP58-206ENST00000463407 IFITM1P13164 125 aa9.63□□□□□ -0.87
NUP58-206ENST00000463407 BAALC-AS2P0C853 105 aa9.63□□□□□ -0.87
NUP58-206ENST00000463407 ETDBQ3ZM63 59 aa9.63□□□□□ -0.87
NUP58-206ENST00000463407 MED12LQ86YW9 2145 aa9.63□□□□□ -0.87
NUP58-206ENST00000463407 C10orf142B7Z368 130 aa9.63□□□□□ -0.87
NUP58-206ENST00000463407 IGHV4-28A0A0C4DH34 117 aa9.62□□□□□ -0.87
NUP58-206ENST00000463407 PRB2P02812 416 aaPredicted RBP9.62□□□□□ -0.87
NUP58-206ENST00000463407 REG3AQ06141 175 aa9.62□□□□□ -0.87
NUP58-206ENST00000463407 K7EP13 123 aa9.62□□□□□ -0.87
NUP58-206ENST00000463407 ANKRD39Q53RE8 183 aa9.62□□□□□ -0.87
NUP58-206ENST00000463407 CEMP1Q6PRD7 247 aaPredicted RBP9.62□□□□□ -0.87
NUP58-206ENST00000463407 FRMD6-AS1P0C7T7 363 aa9.62□□□□□ -0.87
NUP58-206ENST00000463407 CDPF1Q6NVV7 123 aa9.62□□□□□ -0.87
NUP58-206ENST00000463407 FUSP35637 526 aaKnown RBP eCLIP9.61□□□□□ -0.87
NUP58-206ENST00000463407 SHANK1Q9Y566 2161 aa9.61□□□□□ -0.87
NUP58-206ENST00000463407 C9orf153Q5TBE3 101 aa9.61□□□□□ -0.87
NUP58-206ENST00000463407 MBD6Q96DN6 1003 aa9.61□□□□□ -0.87
NUP58-206ENST00000463407 TRAV10A0A0B4J240 114 aa9.61□□□□□ -0.87
NUP58-206ENST00000463407 Q6ZS46 218 aa9.61□□□□□ -0.87
NUP58-206ENST00000463407 ZNF295-AS1Q8N0V1 137 aa9.61□□□□□ -0.87
NUP58-206ENST00000463407 OPRPNQ99935 248 aaPredicted RBP9.61□□□□□ -0.87
NUP58-206ENST00000463407 COA6Q5JTJ3 125 aaKnown RBP9.61□□□□□ -0.87
NUP58-206ENST00000463407 C11orf86A6NJI1 115 aa9.6□□□□□ -0.87
NUP58-206ENST00000463407 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
NUP58-206ENST00000463407 Q6ZUT4 128 aa9.6□□□□□ -0.87
NUP58-206ENST00000463407 GDF5OSQ5U4N7 250 aa9.6□□□□□ -0.87
NUP58-206ENST00000463407 LINC00322Q6ZN03 302 aaPredicted RBP9.59□□□□□ -0.87
NUP58-206ENST00000463407 Q6ZVH6 145 aa9.59□□□□□ -0.87
NUP58-206ENST00000463407 C20orf203Q8NBC4 194 aa9.59□□□□□ -0.87
NUP58-206ENST00000463407 NTN5Q8WTR8 489 aaPredicted RBP9.59□□□□□ -0.87
NUP58-206ENST00000463407 B9D2Q9BPU9 175 aa9.59□□□□□ -0.87
NUP58-206ENST00000463407 CUL9Q8IWT3 2517 aa9.59□□□□□ -0.87
NUP58-206ENST00000463407 A4D1N5 150 aa9.59□□□□□ -0.87
NUP58-206ENST00000463407 M0R2N4 97 aa9.58□□□□□ -0.88
NUP58-206ENST00000463407 ZFAND2AQ8N6M9 145 aa9.58□□□□□ -0.88
NUP58-206ENST00000463407 LRP4O75096 1905 aa9.58□□□□□ -0.88
NUP58-206ENST00000463407 IGLV2-18A0A075B6J9 118 aa9.58□□□□□ -0.88
NUP58-206ENST00000463407 NPSP0C0P6 89 aa9.58□□□□□ -0.88
NUP58-206ENST00000463407 WFDC10AQ9H1F0 79 aa9.58□□□□□ -0.88
NUP58-206ENST00000463407 IGLV2-8P01709 118 aa9.58□□□□□ -0.88
NUP58-206ENST00000463407 TRACP01848 142 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms