RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 OR5AL1P0C617 328 aa13.12□□□□□ -0.31
VARS-221ENST00000463184 Q6ZSA8 131 aa13.12□□□□□ -0.31
VARS-221ENST00000463184 KRTAP29-1A8MX34 341 aaPredicted RBP13.11□□□□□ -0.31
VARS-221ENST00000463184 DMRTA1Q5VZB9 504 aa13.11□□□□□ -0.31
VARS-221ENST00000463184 ZFP82Q8N141 532 aa13.11□□□□□ -0.31
VARS-221ENST00000463184 RPP21Q9H633 154 aaKnown RBP13.11□□□□□ -0.31
VARS-221ENST00000463184 TRAV8-3A0A0A6YYJ7 113 aa13.1□□□□□ -0.31
VARS-221ENST00000463184 A8MWV9 139 aa13.1□□□□□ -0.31
VARS-221ENST00000463184 GATCO43716 136 aaKnown RBP13.1□□□□□ -0.31
VARS-221ENST00000463184 GZMBP10144 247 aa13.1□□□□□ -0.31
VARS-221ENST00000463184 RPL23P62829 140 aaKnown RBP13.1□□□□□ -0.31
VARS-221ENST00000463184 IGLC6P0CF74 106 aa13.09□□□□□ -0.31
VARS-221ENST00000463184 WFDC2Q14508 124 aa13.09□□□□□ -0.31
VARS-221ENST00000463184 UQCC3Q6UW78 93 aa13.09□□□□□ -0.31
VARS-221ENST00000463184 LINC00528Q8N1L1 170 aa13.09□□□□□ -0.31
VARS-221ENST00000463184 FER1L6-AS1Q8NA97 138 aa13.09□□□□□ -0.31
VARS-221ENST00000463184 DEFB104AQ8WTQ1 72 aa13.09□□□□□ -0.31
VARS-221ENST00000463184 OSTCQ9NRP0 149 aa13.09□□□□□ -0.31
VARS-221ENST00000463184 M0R381 172 aa13.08□□□□□ -0.32
VARS-221ENST00000463184 OR10AG1Q8NH19 301 aa13.08□□□□□ -0.32
VARS-221ENST00000463184 ISOC2Q96AB3 205 aa13.08□□□□□ -0.32
VARS-221ENST00000463184 ADIRFQ15847 76 aa13.07□□□□□ -0.32
VARS-221ENST00000463184 CT83Q5H943 113 aa13.07□□□□□ -0.32
VARS-221ENST00000463184 SPANXN1Q5VSR9 72 aa13.07□□□□□ -0.32
VARS-221ENST00000463184 SFRP2Q96HF1 295 aa13.07□□□□□ -0.32
VARS-221ENST00000463184 COX11Q9Y6N1 276 aa13.07□□□□□ -0.32
VARS-221ENST00000463184 LINC00862A6NCI5 91 aa13.06□□□□□ -0.32
VARS-221ENST00000463184 A8MWL6 223 aa13.06□□□□□ -0.32
VARS-221ENST00000463184 F2Z2F3 143 aa13.06□□□□□ -0.32
VARS-221ENST00000463184 ZFP2Q6ZN57 461 aa13.06□□□□□ -0.32
VARS-221ENST00000463184 Q8N3U1 123 aa13.06□□□□□ -0.32
VARS-221ENST00000463184 C15orf54Q8N8G6 183 aa13.06□□□□□ -0.32
VARS-221ENST00000463184 TPPP3Q9BW30 176 aa13.06□□□□□ -0.32
VARS-221ENST00000463184 JPT2Q9H910 190 aa13.06□□□□□ -0.32
VARS-221ENST00000463184 CACNG7P62955 275 aa13.05□□□□□ -0.32
VARS-221ENST00000463184 COMMD7Q86VX2 200 aa13.05□□□□□ -0.32
VARS-221ENST00000463184 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.04□□□□□ -0.32
VARS-221ENST00000463184 MUC21A0A0G2JKD1 596 aa13.04□□□□□ -0.32
VARS-221ENST00000463184 MUC21A0A140T8X8 626 aa13.04□□□□□ -0.32
VARS-221ENST00000463184 GAGE12JA6NER3 117 aa13.04□□□□□ -0.32
VARS-221ENST00000463184 LECT2O14960 151 aa13.04□□□□□ -0.32
VARS-221ENST00000463184 LINC00694P0DN24 101 aa13.04□□□□□ -0.32
VARS-221ENST00000463184 GAGE1Q13065 139 aa13.04□□□□□ -0.32
VARS-221ENST00000463184 GAGE4Q13068 117 aa13.04□□□□□ -0.32
VARS-221ENST00000463184 GAGE5Q13069 117 aa13.04□□□□□ -0.32
VARS-221ENST00000463184 GAGE13Q4V321 117 aa13.04□□□□□ -0.32
VARS-221ENST00000463184 LYZL1Q6UWQ5 148 aa13.04□□□□□ -0.32
VARS-221ENST00000463184 DAZ4Q86SG3 579 aaKnown RBP13.04□□□□□ -0.32
VARS-221ENST00000463184 DAZ3Q9NR90 486 aaKnown RBP13.04□□□□□ -0.32
VARS-221ENST00000463184 A0A087WWC5 75 aa13.03□□□□□ -0.32
VARS-221ENST00000463184 RHODO00212 210 aa13.03□□□□□ -0.32
VARS-221ENST00000463184 UFSP1Q6NVU6 142 aa13.03□□□□□ -0.32
VARS-221ENST00000463184 WDR73Q6P4I2 378 aa13.03□□□□□ -0.32
VARS-221ENST00000463184 OR10G8Q8NGN5 311 aa13.03□□□□□ -0.32
VARS-221ENST00000463184 SAMD10Q9BYL1 202 aa13.03□□□□□ -0.32
VARS-221ENST00000463184 CTRLP40313 264 aa13.02□□□□□ -0.33
VARS-221ENST00000463184 FOXA3P55318 350 aaPredicted RBP13.02□□□□□ -0.33
VARS-221ENST00000463184 SSTP61278 116 aa13.02□□□□□ -0.33
VARS-221ENST00000463184 Q8N976 141 aa13.02□□□□□ -0.33
VARS-221ENST00000463184 TSKUQ8WUA8 353 aa13.02□□□□□ -0.33
VARS-221ENST00000463184 GTSF1Q8WW33 167 aa13.02□□□□□ -0.33
VARS-221ENST00000463184 BAALCQ8WXS3 180 aa13.02□□□□□ -0.33
VARS-221ENST00000463184 RMI2Q96E14 147 aa13.02□□□□□ -0.33
VARS-221ENST00000463184 V9GYV3 84 aa13.02□□□□□ -0.33
VARS-221ENST00000463184 A0A087WWL8 130 aa13.01□□□□□ -0.33
VARS-221ENST00000463184 TMEM218A2RU14 115 aa13.01□□□□□ -0.33
VARS-221ENST00000463184 FAM231BA6NCW3 169 aa13.01□□□□□ -0.33
VARS-221ENST00000463184 PNRC1Q12796 327 aaPredicted RBP13.01□□□□□ -0.33
VARS-221ENST00000463184 SCXQ7RTU7 201 aa13.01□□□□□ -0.33
VARS-221ENST00000463184 GFRA4Q9GZZ7 299 aa13.01□□□□□ -0.33
VARS-221ENST00000463184 SERTAD4-AS1Q5TG53 156 aa13□□□□□ -0.33
VARS-221ENST00000463184 FAM74A4Q5TZK3 123 aa13□□□□□ -0.33
VARS-221ENST00000463184 CNFNQ9BYD5 112 aa13□□□□□ -0.33
VARS-221ENST00000463184 NTF3P20783 257 aa12.99□□□□□ -0.33
VARS-221ENST00000463184 AP1S3Q96PC3 154 aa12.99□□□□□ -0.33
VARS-221ENST00000463184 URGCP-MRPS24S4R325 110 aa12.99□□□□□ -0.33
VARS-221ENST00000463184 F8W036 122 aa12.98□□□□□ -0.33
VARS-221ENST00000463184 SMIM17P0DL12 118 aa12.98□□□□□ -0.33
VARS-221ENST00000463184 LINC01620Q4KN68 170 aa12.98□□□□□ -0.33
VARS-221ENST00000463184 PGLYRP4Q96LB8 373 aa12.98□□□□□ -0.33
VARS-221ENST00000463184 Q9UF83 564 aa12.98□□□□□ -0.33
VARS-221ENST00000463184 HIGD1CA8MV81 97 aa12.97□□□□□ -0.33
VARS-221ENST00000463184 TRGC1P0CF51 173 aa12.97□□□□□ -0.33
VARS-221ENST00000463184 C14orf178Q8N769 122 aaPredicted RBP12.97□□□□□ -0.33
VARS-221ENST00000463184 CHAC1Q9BUX1 264 aa12.97□□□□□ -0.33
VARS-221ENST00000463184 IGKV2D-24A0A075B6R9 120 aa12.96□□□□□ -0.33
VARS-221ENST00000463184 PPP1R2P9O14990 202 aa12.96□□□□□ -0.33
VARS-221ENST00000463184 ADCYAP1P18509 176 aa12.96□□□□□ -0.33
VARS-221ENST00000463184 TWIST1Q15672 202 aa12.96□□□□□ -0.33
VARS-221ENST00000463184 NIT1Q86X76 327 aa12.96□□□□□ -0.33
VARS-221ENST00000463184 BORCS7Q96B45 105 aa12.96□□□□□ -0.33
VARS-221ENST00000463184 SEC11CQ9BY50 192 aa12.96□□□□□ -0.33
VARS-221ENST00000463184 KIF25-AS1Q9Y6Z4 181 aa12.96□□□□□ -0.33
VARS-221ENST00000463184 OXTP01178 125 aa12.95□□□□□ -0.34
VARS-221ENST00000463184 RAB4BP61018 213 aa12.95□□□□□ -0.34
VARS-221ENST00000463184 NAT8BQ9UHF3 227 aa12.95□□□□□ -0.34
VARS-221ENST00000463184 SMIM27A0A1W2PRY6 76 aa12.94□□□□□ -0.34
VARS-221ENST00000463184 KRTAP10-4P60372 401 aaPredicted RBP12.94□□□□□ -0.34
VARS-221ENST00000463184 ELOBQ15370 118 aa12.94□□□□□ -0.34
VARS-221ENST00000463184 ZNF56Q15929 161 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 211.6 ms