RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 TSKUQ8WUA8 353 aa13.37□□□□□ -0.27
HLA-F-222ENST00000462777 SMIM27A0A1W2PRY6 76 aa13.36□□□□□ -0.27
HLA-F-222ENST00000462777 XKRY2A2RUG3 117 aa13.36□□□□□ -0.27
HLA-F-222ENST00000462777 LRCOL1A6NCL2 159 aa13.36□□□□□ -0.27
HLA-F-222ENST00000462777 TYMSP04818 313 aa13.36□□□□□ -0.27
HLA-F-222ENST00000462777 RPS20P60866 119 aaKnown RBP13.36□□□□□ -0.27
HLA-F-222ENST00000462777 Q9HAA7 133 aa13.36□□□□□ -0.27
HLA-F-222ENST00000462777 URGCP-MRPS24S4R325 110 aa13.36□□□□□ -0.27
HLA-F-222ENST00000462777 FABP5P3A8MUU1 101 aa13.35□□□□□ -0.27
HLA-F-222ENST00000462777 RAB5AP20339 215 aa13.35□□□□□ -0.27
HLA-F-222ENST00000462777 HAMPP81172 84 aa13.35□□□□□ -0.27
HLA-F-222ENST00000462777 COX19Q49B96 90 aa13.35□□□□□ -0.27
HLA-F-222ENST00000462777 Q8N814 137 aa13.35□□□□□ -0.27
HLA-F-222ENST00000462777 RHOHQ15669 191 aa13.34□□□□□ -0.27
HLA-F-222ENST00000462777 ZNF876PQ49A33 203 aa13.34□□□□□ -0.27
HLA-F-222ENST00000462777 SLC25A29Q8N8R3 303 aa13.34□□□□□ -0.27
HLA-F-222ENST00000462777 TM2D2Q9BX73 214 aa13.34□□□□□ -0.27
HLA-F-222ENST00000462777 NAT8BQ9UHF3 227 aa13.34□□□□□ -0.27
HLA-F-222ENST00000462777 TRBV6-4A0A1B0GX49 114 aa13.33□□□□□ -0.28
HLA-F-222ENST00000462777 J3QL48 77 aa13.33□□□□□ -0.28
HLA-F-222ENST00000462777 SH2D1AO60880 128 aa13.33□□□□□ -0.28
HLA-F-222ENST00000462777 IGHV3-30P01768 117 aa13.32□□□□□ -0.28
HLA-F-222ENST00000462777 IGHV3-33P01772 117 aa13.32□□□□□ -0.28
HLA-F-222ENST00000462777 CXCL1P09341 107 aa13.32□□□□□ -0.28
HLA-F-222ENST00000462777 IGHV3-30-3P0DP02 117 aa13.32□□□□□ -0.28
HLA-F-222ENST00000462777 IGHV3-30-5P0DP03 117 aa13.32□□□□□ -0.28
HLA-F-222ENST00000462777 CRIP1P50238 77 aa13.32□□□□□ -0.28
HLA-F-222ENST00000462777 LELP1Q5T871 98 aa13.32□□□□□ -0.28
HLA-F-222ENST00000462777 RASL11AQ6T310 242 aa13.32□□□□□ -0.28
HLA-F-222ENST00000462777 OR2D3Q8NGH3 330 aa13.32□□□□□ -0.28
HLA-F-222ENST00000462777 TGIF2-C20orf24A0A0A6YYL0 155 aa13.31□□□□□ -0.28
HLA-F-222ENST00000462777 FOXA3P55318 350 aaPredicted RBP13.31□□□□□ -0.28
HLA-F-222ENST00000462777 LINC01559Q495D7 138 aa13.31□□□□□ -0.28
HLA-F-222ENST00000462777 CFAP126Q5VTH2 177 aa13.31□□□□□ -0.28
HLA-F-222ENST00000462777 ATP5L2Q7Z4Y8 100 aa13.31□□□□□ -0.28
HLA-F-222ENST00000462777 FLG2Q5D862 2391 aaPredicted RBP13.31□□□□□ -0.28
HLA-F-222ENST00000462777 RS1O15537 224 aa13.3□□□□□ -0.28
HLA-F-222ENST00000462777 ATP6V0E2Q8NHE4 81 aa13.3□□□□□ -0.28
HLA-F-222ENST00000462777 GTSF1LQ9H1H1 148 aa13.3□□□□□ -0.28
HLA-F-222ENST00000462777 VPS13BQ7Z7G8 4022 aa13.29□□□□□ -0.28
HLA-F-222ENST00000462777 IGHV3-73A0A0B4J1V6 119 aa13.29□□□□□ -0.28
HLA-F-222ENST00000462777 LAGE3Q14657 143 aa13.29□□□□□ -0.28
HLA-F-222ENST00000462777 SRRM2Q9UQ35 2752 aaKnown RBP13.28□□□□□ -0.28
HLA-F-222ENST00000462777 MT-ND6P03923 174 aa13.28□□□□□ -0.28
HLA-F-222ENST00000462777 PLA2G1BP04054 148 aaKnown RBP13.28□□□□□ -0.28
HLA-F-222ENST00000462777 ZNF80P51504 273 aaPredicted RBP13.28□□□□□ -0.28
HLA-F-222ENST00000462777 WDR73Q6P4I2 378 aa13.28□□□□□ -0.28
HLA-F-222ENST00000462777 MYCBP2O75592 4640 aa13.28□□□□□ -0.28
HLA-F-222ENST00000462777 A0A1B0GW15 77 aa13.27□□□□□ -0.29
HLA-F-222ENST00000462777 HIGD1CA8MV81 97 aa13.27□□□□□ -0.29
HLA-F-222ENST00000462777 C1orf196B1AJZ1 125 aa13.27□□□□□ -0.29
HLA-F-222ENST00000462777 RPS10P46783 165 aaKnown RBP13.27□□□□□ -0.29
HLA-F-222ENST00000462777 FAM30AQ9NZY2 134 aa13.27□□□□□ -0.29
HLA-F-222ENST00000462777 TRAV8-3A0A0A6YYJ7 113 aa13.26□□□□□ -0.29
HLA-F-222ENST00000462777 RAB5BP61020 215 aa13.26□□□□□ -0.29
HLA-F-222ENST00000462777 NUP35Q8NFH5 326 aa13.26□□□□□ -0.29
HLA-F-222ENST00000462777 PTH2Q96A98 100 aa13.26□□□□□ -0.29
HLA-F-222ENST00000462777 S100A8P05109 93 aa13.25□□□□□ -0.29
HLA-F-222ENST00000462777 BORCS7Q96B45 105 aa13.25□□□□□ -0.29
HLA-F-222ENST00000462777 C9orf85Q96MD7 179 aa13.25□□□□□ -0.29
HLA-F-222ENST00000462777 GNB1LQ9BYB4 327 aa13.25□□□□□ -0.29
HLA-F-222ENST00000462777 GTSF1Q8WW33 167 aa13.24□□□□□ -0.29
HLA-F-222ENST00000462777 F2Z2F3 143 aa13.23□□□□□ -0.29
HLA-F-222ENST00000462777 HLA-DQA1P01909 254 aa13.23□□□□□ -0.29
HLA-F-222ENST00000462777 CTRLP40313 264 aa13.23□□□□□ -0.29
HLA-F-222ENST00000462777 C11orf21Q9P2W6 132 aa13.23□□□□□ -0.29
HLA-F-222ENST00000462777 COX11Q9Y6N1 276 aa13.23□□□□□ -0.29
HLA-F-222ENST00000462777 A0A1B0GUT8 65 aa13.22□□□□□ -0.29
HLA-F-222ENST00000462777 A0A1B0GXF2 115 aa13.22□□□□□ -0.29
HLA-F-222ENST00000462777 IGLC6P0CF74 106 aa13.22□□□□□ -0.29
HLA-F-222ENST00000462777 HBBP68871 147 aa13.22□□□□□ -0.29
HLA-F-222ENST00000462777 RIGQ13278 110 aa13.22□□□□□ -0.29
HLA-F-222ENST00000462777 DNLZQ5SXM8 178 aa13.22□□□□□ -0.29
HLA-F-222ENST00000462777 A8MWV9 139 aa13.21□□□□□ -0.29
HLA-F-222ENST00000462777 S100A4P26447 101 aaKnown RBP13.21□□□□□ -0.29
HLA-F-222ENST00000462777 ZFP2Q6ZN57 461 aa13.21□□□□□ -0.29
HLA-F-222ENST00000462777 FER1L6-AS1Q8NA97 138 aa13.21□□□□□ -0.29
HLA-F-222ENST00000462777 CNFNQ9BYD5 112 aa13.21□□□□□ -0.29
HLA-F-222ENST00000462777 TMA7Q9Y2S6 64 aaKnown RBP13.21□□□□□ -0.29
HLA-F-222ENST00000462777 IGKV3D-20A0A0C4DH25 116 aa13.2□□□□□ -0.3
HLA-F-222ENST00000462777 GAGE12JA6NER3 117 aa13.2□□□□□ -0.3
HLA-F-222ENST00000462777 GAGE1Q13065 139 aa13.2□□□□□ -0.3
HLA-F-222ENST00000462777 GAGE4Q13068 117 aa13.2□□□□□ -0.3
HLA-F-222ENST00000462777 GAGE5Q13069 117 aa13.2□□□□□ -0.3
HLA-F-222ENST00000462777 GAGE13Q4V321 117 aa13.2□□□□□ -0.3
HLA-F-222ENST00000462777 LINC00528Q8N1L1 170 aa13.2□□□□□ -0.3
HLA-F-222ENST00000462777 DEFB104AQ8WTQ1 72 aa13.2□□□□□ -0.3
HLA-F-222ENST00000462777 RMI2Q96E14 147 aa13.2□□□□□ -0.3
HLA-F-222ENST00000462777 PGLYRP4Q96LB8 373 aa13.2□□□□□ -0.3
HLA-F-222ENST00000462777 OR5AL1P0C617 328 aa13.19□□□□□ -0.3
HLA-F-222ENST00000462777 GZMBP10144 247 aa13.19□□□□□ -0.3
HLA-F-222ENST00000462777 RNASE3P12724 160 aaKnown RBP13.19□□□□□ -0.3
HLA-F-222ENST00000462777 PIK3CD-AS1Q5SR53 167 aa13.19□□□□□ -0.3
HLA-F-222ENST00000462777 MRPL54Q6P161 138 aaKnown RBP13.19□□□□□ -0.3
HLA-F-222ENST00000462777 GATD1Q8NB37 220 aa13.19□□□□□ -0.3
HLA-F-222ENST00000462777 TRAPPC1Q9Y5R8 145 aa13.19□□□□□ -0.3
HLA-F-222ENST00000462777 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.18□□□□□ -0.3
HLA-F-222ENST00000462777 TMSB15BA0A087X1C1 80 aa13.18□□□□□ -0.3
HLA-F-222ENST00000462777 LECT2O14960 151 aa13.18□□□□□ -0.3
HLA-F-222ENST00000462777 SNAI2O43623 268 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms