RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ESRGQ1W209 222 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 SUMO4Q6EEV6 95 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 MRPL54Q6P161 138 aaKnown RBP4.42□□□□□ -1.7
SF3B1-206ENST00000462613 LYPD5Q6UWN5 251 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 DAZ4Q86SG3 579 aaKnown RBP4.42□□□□□ -1.7
SF3B1-206ENST00000462613 MRAP2Q96G30 205 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 UPK3BQ9BT76 320 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 Q9H8V8 135 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 NIT2Q9NQR4 276 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 DAZ3Q9NR90 486 aaKnown RBP4.42□□□□□ -1.7
SF3B1-206ENST00000462613 TMEM242Q9NWH2 141 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 LINC00588Q9Y4M8 146 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 KIF25-AS1Q9Y6Z4 181 aa4.42□□□□□ -1.7
SF3B1-206ENST00000462613 C7orf77A4D0Y5 90 aa4.41□□□□□ -1.7
SF3B1-206ENST00000462613 M0QY20 66 aa4.41□□□□□ -1.7
SF3B1-206ENST00000462613 COX19Q49B96 90 aa4.41□□□□□ -1.7
SF3B1-206ENST00000462613 C10orf91Q5T1B1 145 aa4.41□□□□□ -1.7
SF3B1-206ENST00000462613 LELP1Q5T871 98 aa4.41□□□□□ -1.7
SF3B1-206ENST00000462613 Q6ZSN1 163 aa4.41□□□□□ -1.7
SF3B1-206ENST00000462613 C10orf126Q8N4M7 172 aa4.41□□□□□ -1.7
SF3B1-206ENST00000462613 NEXN-AS1Q8NBZ9 246 aa4.41□□□□□ -1.7
SF3B1-206ENST00000462613 CLRN3Q8NCR9 226 aa4.41□□□□□ -1.7
SF3B1-206ENST00000462613 IGLV2-18A0A075B6J9 118 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 TRBV25-1A0A075B6N4 114 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 A0A087WX48 190 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 IGHV3-38A0A0C4DH36 116 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 PPBPP02775 128 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 CKS2P33552 79 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 LINC00315P59091 139 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 UBE2D3P61077 147 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 UBE2D2P62837 147 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 COTL1Q14019 142 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 AMN1Q8IY45 258 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 ST20Q9HBF5 79 aa4.4□□□□□ -1.71
SF3B1-206ENST00000462613 TRAV26-2A0A0B4J265 109 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 IGHV1-24A0A0C4DH33 117 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 NBDYA0A0U1RRE5 68 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 M0R2N4 97 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 UBE2L6O14933 153 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 TCAPO15273 167 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 LINC00694P0DN24 101 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 BTF3P20290 206 aaKnown RBP4.39□□□□□ -1.71
SF3B1-206ENST00000462613 RAB4AP20338 218 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 PMCHP20382 165 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 SMAGPQ0VAQ4 97 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 ELOBQ15370 118 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 FAM104BQ5XKR9 115 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 ORMDL3Q8N138 153 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 GATD1Q8NB37 220 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 KIR2DL4Q99706 377 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 CHCHD5Q9BSY4 110 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 CHCHD7Q9BUK0 85 aa4.39□□□□□ -1.71
SF3B1-206ENST00000462613 TRBV6-8A0A0A6YYG3 113 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 A0A1B0GXF2 115 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 SDHAF1A6NFY7 115 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 TMEM262E9PQX1 116 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 I3L3M4 83 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 PHOX2AO14813 284 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 NCR2O95944 276 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 HLA-DQA1P01909 254 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 APCSP02743 223 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 MT-ND6P03923 174 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 DNAH10OSP0CZ25 163 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 AMTP48728 403 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 MRPL51Q4U2R6 128 aaKnown RBP4.38□□□□□ -1.71
SF3B1-206ENST00000462613 LINC01556Q5JQF7 62 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 C1orf134Q5TEV5 83 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 NFE4Q86UQ8 179 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 WFDC10BQ8IUB3 73 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 SLC7A5P1Q8MH63 180 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 TMEM243Q9BU79 118 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 LAMTOR2Q9Y2Q5 125 aa4.38□□□□□ -1.71
SF3B1-206ENST00000462613 CSMD3Q7Z407 3707 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 TRBV6-5A0A0K0K1A5 114 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 VCYO14598 125 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 CRPP02741 224 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 FCER1GP30273 86 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 SUMO2P61956 95 aaKnown RBP4.37□□□□□ -1.71
SF3B1-206ENST00000462613 AMMECR1LQ6DCA0 310 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 TMEM136Q6ZRR5 245 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 TMEM18Q96B42 140 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 RMI2Q96E14 147 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 RPL39LQ96EH5 51 aaKnown RBP4.37□□□□□ -1.71
SF3B1-206ENST00000462613 RNF185Q96GF1 192 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 C20orf78Q9BR46 151 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 Q9UF83 564 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 DNAH7Q8WXX0 4024 aa4.37□□□□□ -1.71
SF3B1-206ENST00000462613 TRAV8-3A0A0A6YYJ7 113 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 D6R8Y8 96 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 TNFRSF6BO95407 300 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 IGHV3-30P01768 117 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 IGHV3-33P01772 117 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 IGHV3-30-3P0DP02 117 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 IGHV3-30-5P0DP03 117 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 RAB5AP20339 215 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 LAGE3Q14657 143 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 IQCJQ1A5X6 159 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 LINC00336Q6ZUF6 198 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 C6orf223Q8N319 242 aa4.36□□□□□ -1.71
SF3B1-206ENST00000462613 PRELID3AQ96N28 172 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms