RNA–Protein interactions for RNA: ENST00000461990.1

LINC01140-201, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,181 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-201ENST00000461990 FAM27E3Q08E93 113 aa6.82□□□□□ -1.32
LINC01140-201ENST00000461990 VSIG2Q96IQ7 327 aa6.82□□□□□ -1.32
LINC01140-201ENST00000461990 BCE1O60756 84 aa6.82□□□□□ -1.32
LINC01140-201ENST00000461990 FANCD2OSQ96PS1 177 aa6.82□□□□□ -1.32
LINC01140-201ENST00000461990 AHCTF1Q8WYP5 2266 aa6.82□□□□□ -1.32
LINC01140-201ENST00000461990 IGHV1-3A0A0C4DH29 117 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 RNASE4P34096 147 aaKnown RBP6.81□□□□□ -1.32
LINC01140-201ENST00000461990 C16orf92Q96LL3 132 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 ZNF580Q9UK33 172 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 IGHV1-46P01743 117 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 COPS9Q8WXC6 57 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 C20orf173Q96LM9 149 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 NDUFA12Q9UI09 145 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 PHLDA3Q9Y5J5 127 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 CACNA1EQ15878 2313 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 H7BZZ5 65 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 IGHV1-8P0DP01 117 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 ZGRF1Q86YA3 2104 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 FAM223AQ8IWN6 122 aa6.81□□□□□ -1.32
LINC01140-201ENST00000461990 IGHV3-64A0A075B6Q5 118 aa6.8□□□□□ -1.32
LINC01140-201ENST00000461990 PRR9Q5T870 116 aa6.8□□□□□ -1.32
LINC01140-201ENST00000461990 Q8N2B8 174 aa6.8□□□□□ -1.32
LINC01140-201ENST00000461990 A0A087WVE0 104 aa6.8□□□□□ -1.32
LINC01140-201ENST00000461990 A0A0J9YXV3 536 aa6.8□□□□□ -1.32
LINC01140-201ENST00000461990 DNAL4O96015 105 aa6.8□□□□□ -1.32
LINC01140-201ENST00000461990 IGLV1-47P01700 117 aa6.8□□□□□ -1.32
LINC01140-201ENST00000461990 ATP5EP2Q5VTU8 51 aa6.8□□□□□ -1.32
LINC01140-201ENST00000461990 DNAJC13O75165 2243 aa6.8□□□□□ -1.32
LINC01140-201ENST00000461990 DMDP11532 3685 aa6.8□□□□□ -1.32
LINC01140-201ENST00000461990 IGKV3D-7A0A0C4DH55 119 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 CTSGP08311 255 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 CCL4P13236 92 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 XCL1P47992 114 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 XCL2Q9UBD3 114 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 IGLV4-3A0A075B6K6 122 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 TRAV21A0A0B4J279 112 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 KNCNA6PVL3 124 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 PF4P02776 101 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 SUMO4Q6EEV6 95 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 LINC00846Q9NV44 126 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 RBMY1BA6NDE4 496 aaKnown RBP6.79□□□□□ -1.32
LINC01140-201ENST00000461990 RBMY1EA6NEQ0 496 aaKnown RBP6.79□□□□□ -1.32
LINC01140-201ENST00000461990 RBMY1DP0C7P1 496 aaKnown RBP6.79□□□□□ -1.32
LINC01140-201ENST00000461990 RBMY1A1P0DJD3 496 aaKnown RBP6.79□□□□□ -1.32
LINC01140-201ENST00000461990 RBMY1CP0DJD4 496 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 RBMY1FQ15415 496 aaKnown RBP6.79□□□□□ -1.32
LINC01140-201ENST00000461990 MDS2Q8NDY4 140 aa6.79□□□□□ -1.32
LINC01140-201ENST00000461990 MUC3AQ02505 3323 aa6.78□□□□□ -1.32
LINC01140-201ENST00000461990 ADARB2-AS1A8MUL3 147 aa6.78□□□□□ -1.32
LINC01140-201ENST00000461990 RNASE3P12724 160 aaKnown RBP6.78□□□□□ -1.32
LINC01140-201ENST00000461990 APRG1Q8IVJ8 170 aa6.78□□□□□ -1.32
LINC01140-201ENST00000461990 ZDBF2Q9HCK1 2354 aa6.78□□□□□ -1.32
LINC01140-201ENST00000461990 RP1L1Q8IWN7 2480 aaPredicted RBP6.78□□□□□ -1.32
LINC01140-201ENST00000461990 ZFAND2AQ8N6M9 145 aa6.78□□□□□ -1.32
LINC01140-201ENST00000461990 C20orf203Q8NBC4 194 aa6.78□□□□□ -1.32
LINC01140-201ENST00000461990 RNASE6Q93091 150 aaKnown RBP6.78□□□□□ -1.32
LINC01140-201ENST00000461990 MUC6Q6W4X9 2439 aa6.78□□□□□ -1.32
LINC01140-201ENST00000461990 GHRHP01286 108 aa6.77□□□□□ -1.32
LINC01140-201ENST00000461990 S100A4P26447 101 aaKnown RBP6.77□□□□□ -1.32
LINC01140-201ENST00000461990 LOXP28300 417 aaPredicted RBP6.77□□□□□ -1.32
LINC01140-201ENST00000461990 KLKP1Q107X0 134 aa6.77□□□□□ -1.32
LINC01140-201ENST00000461990 C6orf226Q5I0X4 101 aa6.77□□□□□ -1.32
LINC01140-201ENST00000461990 OVOL2Q9BRP0 275 aa6.77□□□□□ -1.32
LINC01140-201ENST00000461990 TRAV12-3A0A0B4J271 114 aa6.77□□□□□ -1.33
LINC01140-201ENST00000461990 BUB1B-PAK6H3BSN5 160 aa6.77□□□□□ -1.33
LINC01140-201ENST00000461990 CDSNQ15517 529 aa6.77□□□□□ -1.33
LINC01140-201ENST00000461990 LYPD5Q6UWN5 251 aa6.77□□□□□ -1.33
LINC01140-201ENST00000461990 OPRPNQ99935 248 aaPredicted RBP6.77□□□□□ -1.33
LINC01140-201ENST00000461990 NBEAQ8NFP9 2946 aa6.77□□□□□ -1.33
LINC01140-201ENST00000461990 TRBV10-3A0A0K0K1G6 114 aa6.77□□□□□ -1.33
LINC01140-201ENST00000461990 A0A1W2PRX2 142 aa6.77□□□□□ -1.33
LINC01140-201ENST00000461990 VMO1Q7Z5L0 202 aa6.77□□□□□ -1.33
LINC01140-201ENST00000461990 NPBQ8NG41 125 aa6.77□□□□□ -1.33
LINC01140-201ENST00000461990 S4R3C0 116 aa6.77□□□□□ -1.33
LINC01140-201ENST00000461990 NDUFA1O15239 70 aa6.76□□□□□ -1.33
LINC01140-201ENST00000461990 WFDC11Q8NEX6 87 aa6.76□□□□□ -1.33
LINC01140-201ENST00000461990 SAP25Q8TEE9 199 aa6.76□□□□□ -1.33
LINC01140-201ENST00000461990 FAM218AQ96MZ4 157 aa6.76□□□□□ -1.33
LINC01140-201ENST00000461990 DEFB127Q9H1M4 99 aa6.76□□□□□ -1.33
LINC01140-201ENST00000461990 NDUFB3O43676 98 aa6.76□□□□□ -1.33
LINC01140-201ENST00000461990 LINC00308Q8TCZ7 52 aa6.76□□□□□ -1.33
LINC01140-201ENST00000461990 NACAE9PAV3 2078 aa6.76□□□□□ -1.33
LINC01140-201ENST00000461990 ATP5EP56381 51 aaPredicted RBP6.75□□□□□ -1.33
LINC01140-201ENST00000461990 S100A7L2Q5SY68 101 aa6.75□□□□□ -1.33
LINC01140-201ENST00000461990 NUP37Q8NFH4 326 aa6.75□□□□□ -1.33
LINC01140-201ENST00000461990 ITLN2Q8WWU7 325 aaPredicted RBP6.75□□□□□ -1.33
LINC01140-201ENST00000461990 FAM104AQ969W3 186 aa6.75□□□□□ -1.33
LINC01140-201ENST00000461990 RPL28P46779 137 aaKnown RBP6.75□□□□□ -1.33
LINC01140-201ENST00000461990 CFHR3Q02985 330 aa6.75□□□□□ -1.33
LINC01140-201ENST00000461990 KLK9Q2XQG4 91 aa6.75□□□□□ -1.33
LINC01140-201ENST00000461990 C1orf158Q8N1D5 194 aa6.75□□□□□ -1.33
LINC01140-201ENST00000461990 KAAG1Q9UBP8 84 aa6.75□□□□□ -1.33
LINC01140-201ENST00000461990 KLK9Q9UKQ9 250 aa6.75□□□□□ -1.33
LINC01140-201ENST00000461990 TRBV12-3P01733 135 aa6.75□□□□□ -1.33
LINC01140-201ENST00000461990 C20orf197Q8N268 126 aa6.75□□□□□ -1.33
LINC01140-201ENST00000461990 ARHGAP32A7KAX9 2087 aa6.74□□□□□ -1.33
LINC01140-201ENST00000461990 CLPSL1A2RUU4 121 aa6.74□□□□□ -1.33
LINC01140-201ENST00000461990 CNEP1R1Q8N9A8 125 aa6.74□□□□□ -1.33
LINC01140-201ENST00000461990 MUC4Q99102 2169 aa6.74□□□□□ -1.33
LINC01140-201ENST00000461990 CIRBPQ14011 172 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms