RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 SPANXN1Q5VSR9 72 aa11.63□□□□□ -0.55
SSB-206ENST00000461708 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
SSB-206ENST00000461708 A0A0D9SG52 128 aa11.62□□□□□ -0.55
SSB-206ENST00000461708 IGLV2-8P01709 118 aa11.62□□□□□ -0.55
SSB-206ENST00000461708 TMUB2Q71RG4 321 aa11.62□□□□□ -0.55
SSB-206ENST00000461708 C15orf54Q8N8G6 183 aa11.62□□□□□ -0.55
SSB-206ENST00000461708 CHCHD5Q9BSY4 110 aa11.62□□□□□ -0.55
SSB-206ENST00000461708 KIF25-AS1Q9Y6Z4 181 aa11.62□□□□□ -0.55
SSB-206ENST00000461708 F5H697 171 aa11.61□□□□□ -0.55
SSB-206ENST00000461708 SMLR1H3BR10 107 aa11.61□□□□□ -0.55
SSB-206ENST00000461708 ANGP03950 147 aaKnown RBP11.61□□□□□ -0.55
SSB-206ENST00000461708 H2AFB1P0C5Y9 115 aa11.61□□□□□ -0.55
SSB-206ENST00000461708 EIF5AP63241 154 aaKnown RBP11.61□□□□□ -0.55
SSB-206ENST00000461708 AP1S3Q96PC3 154 aa11.61□□□□□ -0.55
SSB-206ENST00000461708 PRR34Q9NV39 138 aa11.61□□□□□ -0.55
SSB-206ENST00000461708 BCL2L11O43521 198 aa11.6□□□□□ -0.55
SSB-206ENST00000461708 SMIM17P0DL12 118 aa11.6□□□□□ -0.55
SSB-206ENST00000461708 DGAT2L7PQ6IED9 249 aa11.6□□□□□ -0.55
SSB-206ENST00000461708 A0A1B0GV50 99 aa11.59□□□□□ -0.55
SSB-206ENST00000461708 KANTRA0A1W2PQU2 76 aa11.59□□□□□ -0.55
SSB-206ENST00000461708 RPL35P42766 123 aaKnown RBP11.59□□□□□ -0.55
SSB-206ENST00000461708 NTM-AS1Q6ZSK4 140 aa11.59□□□□□ -0.55
SSB-206ENST00000461708 C11orf52Q96A22 123 aa11.59□□□□□ -0.55
SSB-206ENST00000461708 USP17L23D6RBM5 183 aa11.58□□□□□ -0.56
SSB-206ENST00000461708 MANBALQ9NQG1 85 aa11.58□□□□□ -0.56
SSB-206ENST00000461708 TRBV25-1A0A075B6N4 114 aa11.57□□□□□ -0.56
SSB-206ENST00000461708 TRAV1-1A0A0B4J248 108 aa11.57□□□□□ -0.56
SSB-206ENST00000461708 MUC21A0A0G2JKD1 596 aa11.57□□□□□ -0.56
SSB-206ENST00000461708 MUC21A0A140T8X8 626 aa11.57□□□□□ -0.56
SSB-206ENST00000461708 OXTP01178 125 aa11.57□□□□□ -0.56
SSB-206ENST00000461708 RBX1P62877 108 aa11.57□□□□□ -0.56
SSB-206ENST00000461708 IQCJQ1A5X6 159 aa11.57□□□□□ -0.56
SSB-206ENST00000461708 DERL1Q9BUN8 251 aa11.57□□□□□ -0.56
SSB-206ENST00000461708 H7C1H1 209 aa11.56□□□□□ -0.56
SSB-206ENST00000461708 IGLC6P0CF74 106 aa11.56□□□□□ -0.56
SSB-206ENST00000461708 RPS20P60866 119 aaKnown RBP11.56□□□□□ -0.56
SSB-206ENST00000461708 KRTAP26-1Q6PEX3 210 aa11.56□□□□□ -0.56
SSB-206ENST00000461708 SMIM12Q96EX1 92 aa11.56□□□□□ -0.56
SSB-206ENST00000461708 M0QY20 66 aa11.55□□□□□ -0.56
SSB-206ENST00000461708 HLA-DQA1P01909 254 aa11.55□□□□□ -0.56
SSB-206ENST00000461708 PRSS1P07477 247 aa11.55□□□□□ -0.56
SSB-206ENST00000461708 C9orf163Q8N9P6 203 aa11.55□□□□□ -0.56
SSB-206ENST00000461708 LRP1Q07954 4544 aaKnown RBP11.55□□□□□ -0.56
SSB-206ENST00000461708 IGHV1-24A0A0C4DH33 117 aa11.54□□□□□ -0.56
SSB-206ENST00000461708 RAB5CP51148 216 aa11.54□□□□□ -0.56
SSB-206ENST00000461708 CACNG7P62955 275 aa11.54□□□□□ -0.56
SSB-206ENST00000461708 SERTAD4-AS1Q5TG53 156 aa11.54□□□□□ -0.56
SSB-206ENST00000461708 LINC00269Q8N2A0 174 aa11.54□□□□□ -0.56
SSB-206ENST00000461708 CLRN3Q8NCR9 226 aa11.54□□□□□ -0.56
SSB-206ENST00000461708 C19orf71A6NCJ1 209 aa11.53□□□□□ -0.56
SSB-206ENST00000461708 SSTP61278 116 aa11.53□□□□□ -0.56
SSB-206ENST00000461708 CCL20P78556 96 aa11.53□□□□□ -0.56
SSB-206ENST00000461708 GAGE6Q13070 117 aa11.53□□□□□ -0.56
SSB-206ENST00000461708 CENPWQ5EE01 88 aa11.53□□□□□ -0.56
SSB-206ENST00000461708 FER1L6-AS1Q8NA97 138 aa11.53□□□□□ -0.56
SSB-206ENST00000461708 DAZAP1Q96EP5 407 aaKnown RBP11.53□□□□□ -0.56
SSB-206ENST00000461708 GNG13Q9P2W3 67 aa11.53□□□□□ -0.56
SSB-206ENST00000461708 TRAV8-4A0A0B4J246 113 aa11.52□□□□□ -0.57
SSB-206ENST00000461708 A0A1B0GUV1 79 aa11.52□□□□□ -0.57
SSB-206ENST00000461708 F2Z2F3 143 aa11.52□□□□□ -0.57
SSB-206ENST00000461708 P01737 135 aa11.52□□□□□ -0.57
SSB-206ENST00000461708 OR2D3Q8NGH3 330 aa11.52□□□□□ -0.57
SSB-206ENST00000461708 XKRY2A2RUG3 117 aa11.51□□□□□ -0.57
SSB-206ENST00000461708 TEX46H3BTG2 121 aa11.51□□□□□ -0.57
SSB-206ENST00000461708 GZMBP10144 247 aa11.51□□□□□ -0.57
SSB-206ENST00000461708 REG3AQ06141 175 aa11.51□□□□□ -0.57
SSB-206ENST00000461708 SUMO4Q6EEV6 95 aa11.51□□□□□ -0.57
SSB-206ENST00000461708 EIF5AL1Q6IS14 154 aaKnown RBP11.51□□□□□ -0.57
SSB-206ENST00000461708 PDE6DO43924 150 aa11.5□□□□□ -0.57
SSB-206ENST00000461708 GNG4P50150 75 aa11.5□□□□□ -0.57
SSB-206ENST00000461708 CNBPP62633 177 aaKnown RBP11.5□□□□□ -0.57
SSB-206ENST00000461708 SDIM1Q6ZPB5 146 aa11.5□□□□□ -0.57
SSB-206ENST00000461708 PGLYRP4Q96LB8 373 aa11.5□□□□□ -0.57
SSB-206ENST00000461708 TPPP3Q9BW30 176 aa11.5□□□□□ -0.57
SSB-206ENST00000461708 BIN3Q9NQY0 253 aa11.5□□□□□ -0.57
SSB-206ENST00000461708 MGPP08493 103 aa11.49□□□□□ -0.57
SSB-206ENST00000461708 TRGC1P0CF51 173 aa11.49□□□□□ -0.57
SSB-206ENST00000461708 RPL37AP61513 92 aaKnown RBP11.49□□□□□ -0.57
SSB-206ENST00000461708 WDR73Q6P4I2 378 aa11.49□□□□□ -0.57
SSB-206ENST00000461708 RASL11AQ6T310 242 aa11.49□□□□□ -0.57
SSB-206ENST00000461708 CLPSL2Q6UWE3 100 aa11.49□□□□□ -0.57
SSB-206ENST00000461708 C20orf203Q8NBC4 194 aa11.49□□□□□ -0.57
SSB-206ENST00000461708 TMEM243Q9BU79 118 aa11.49□□□□□ -0.57
SSB-206ENST00000461708 MEF2BQ02080 365 aaPredicted RBP11.48□□□□□ -0.57
SSB-206ENST00000461708 C9orf62Q8N4C0 152 aa11.48□□□□□ -0.57
SSB-206ENST00000461708 NIT2Q9NQR4 276 aa11.48□□□□□ -0.57
SSB-206ENST00000461708 FAT3Q8TDW7 4589 aa11.47□□□□□ -0.57
SSB-206ENST00000461708 RAB19A4D1S5 217 aa11.47□□□□□ -0.57
SSB-206ENST00000461708 NKX2-5P52952 324 aaPredicted RBP11.47□□□□□ -0.57
SSB-206ENST00000461708 CIRBPQ14011 172 aaKnown RBP11.47□□□□□ -0.57
SSB-206ENST00000461708 DPH3P1Q9H4G8 78 aa11.47□□□□□ -0.57
SSB-206ENST00000461708 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
SSB-206ENST00000461708 PKHD1L1Q86WI1 4243 aa11.46□□□□□ -0.57
SSB-206ENST00000461708 TRBV20OR9-2A0A075B6H5 130 aa11.46□□□□□ -0.57
SSB-206ENST00000461708 IFNA1P01562 189 aa11.46□□□□□ -0.57
SSB-206ENST00000461708 SULT1A2P50226 295 aa11.46□□□□□ -0.57
SSB-206ENST00000461708 NTF3P20783 257 aa11.45□□□□□ -0.58
SSB-206ENST00000461708 CTRLP40313 264 aa11.45□□□□□ -0.58
SSB-206ENST00000461708 LYZL1Q6UWQ5 148 aa11.45□□□□□ -0.58
SSB-206ENST00000461708 CNFNQ9BYD5 112 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms