RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ATG5Q9H1Y0 275 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 TAF9BQ9HBM6 251 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 ABRACLQ9P1F3 81 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 MEGF8Q7Z7M0 2845 aa1.46□□□□□ -2.18
CLK1-206ENST00000461326 JMJD1CQ15652 2540 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 COL6A5A8TX70 2615 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 ATRQ13535 2644 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 SMIM31A0A1B0GVY4 71 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 CLPSL1A2RUU4 121 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 CCDC160A6NGH7 325 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 FAM25AB3EWG3 89 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 FAM25CB3EWG5 89 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 FAM25GB3EWG6 89 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 ZNF736B4DX44 427 aaPredicted RBP1.45□□□□□ -2.18
CLK1-206ENST00000461326 YPEL1O60688 119 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 PGLYRP1O75594 196 aaPredicted RBP1.45□□□□□ -2.18
CLK1-206ENST00000461326 IFNA10P01566 189 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 SCTP09683 121 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 SAA2P0DJI9 122 aaPredicted RBP1.45□□□□□ -2.18
CLK1-206ENST00000461326 HIST1H1DP16402 221 aaKnown RBP1.45□□□□□ -2.18
CLK1-206ENST00000461326 HIST1H2BOP23527 126 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 HIST1H2BBP33778 126 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 HIST1H2BDP58876 126 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 GNG2P59768 71 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 ARPC4P59998 168 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 NCS1P62166 190 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 HIST1H2BCP62807 126 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 BLCAPP62952 87 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 PLGLAQ15195 96 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 HIST2H2BEQ16778 126 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 MORN2Q502X0 79 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 RPL39P5Q59GN2 51 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.45□□□□□ -2.18
CLK1-206ENST00000461326 HACD4Q5VWC8 232 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 COA5Q86WW8 74 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 CLVS1Q8IUQ0 354 aaPredicted RBP1.45□□□□□ -2.18
CLK1-206ENST00000461326 LINC00311Q8N616 119 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 ZNF439Q8NDP4 499 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 OR10J5Q8NHC4 309 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 SPACA4Q8TDM5 124 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 HIST1H2BHQ93079 126 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 YPEL2Q96QA6 119 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 HIST1H2BNQ99877 126 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 HIST1H2BMQ99879 126 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 GINS4Q9BRT9 223 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 DCSTAMPQ9H295 470 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 CST9LQ9H4G1 147 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 COMMD3Q9UBI1 195 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 JPT1Q9UK76 154 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 TMEM56-RWDD3S4R434 201 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 DNAH3Q8TD57 4116 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 STAB1Q9NY15 2570 aa1.45□□□□□ -2.18
CLK1-206ENST00000461326 DNHD1Q96M86 4753 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 NBEAL1Q6ZS30 2694 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 TRGV2A0A075B6R0 118 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 TCRBV4S1A1TA0A5B7 111 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 OR4C46A6NHA9 309 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 OOSP1A8MZH6 123 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 APOA2P02652 100 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 PMP2P02689 132 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 TCRBP04435 133 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 TRGC1P0CF51 173 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 AKR1C3P42330 323 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 ZNF80P51504 273 aaPredicted RBP1.44□□□□□ -2.18
CLK1-206ENST00000461326 DYNLT3P51808 116 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 FXYD4P59646 89 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 SPCS2Q15005 226 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 IAH1Q2TAA2 248 aaPredicted RBP1.44□□□□□ -2.18
CLK1-206ENST00000461326 AADACL3Q5VUY0 350 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 C10orf99Q6UWK7 81 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 Q6ZRN7 208 aaPredicted RBP1.44□□□□□ -2.18
CLK1-206ENST00000461326 SNX29P2Q8IUI4 249 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 ANKRD29Q8N6D5 301 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 C5orf56Q8N8D9 126 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 OR2T10Q8NGZ9 312 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 AP3S1Q92572 193 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 TOMM6Q96B49 74 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 ISOC1Q96CN7 298 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 S100A16Q96FQ6 103 aaKnown RBP1.44□□□□□ -2.18
CLK1-206ENST00000461326 NABP2Q9BQ15 211 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 DERL1Q9BUN8 251 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 C6orf62Q9GZU0 229 aaPredicted RBP1.44□□□□□ -2.18
CLK1-206ENST00000461326 FBN3Q75N90 2809 aa1.44□□□□□ -2.18
CLK1-206ENST00000461326 TRBV6-7A0A0A0MS04 114 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 M0QZK8 103 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 CNIH1O95406 144 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 CRYZL1O95825 349 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 PPYP01298 95 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 PPBPP02775 128 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 CTXN2P0C2S0 81 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 APELAP0DMC3 54 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 RPL5P46777 297 aaKnown RBP1.43□□□□□ -2.18
CLK1-206ENST00000461326 ZNF137PP52743 207 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 TMBIM6P55061 237 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 AP3S2P59780 193 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 RANP62826 216 aaKnown RBP1.43□□□□□ -2.18
CLK1-206ENST00000461326 CDK10Q15131 360 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 RTL8BQ17RB0 113 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 TMEM97Q5BJF2 176 aa1.43□□□□□ -2.18
CLK1-206ENST00000461326 ZNF818PQ6ZRF7 136 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms