RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 NACAE9PAV3 2078 aa6.84□□□□□ -1.31
BRCA1-205ENST00000461221 TRIOBPQ9H2D6 2365 aa6.84□□□□□ -1.31
BRCA1-205ENST00000461221 SPRNQ5BIV9 151 aa6.84□□□□□ -1.31
BRCA1-205ENST00000461221 IGFL2Q6UWQ7 119 aa6.84□□□□□ -1.31
BRCA1-205ENST00000461221 WFDC10BQ8IUB3 73 aa6.84□□□□□ -1.31
BRCA1-205ENST00000461221 CHCHD10Q8WYQ3 142 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-205ENST00000461221 TEX49A0A1B0GTD5 131 aa6.84□□□□□ -1.31
BRCA1-205ENST00000461221 IBA57-AS1B1ANH7 110 aa6.84□□□□□ -1.31
BRCA1-205ENST00000461221 CRYGDP07320 174 aa6.84□□□□□ -1.31
BRCA1-205ENST00000461221 ANK1P16157 1881 aa6.84□□□□□ -1.32
BRCA1-205ENST00000461221 WT1P19544 449 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-205ENST00000461221 Q6ZSR3 168 aa6.83□□□□□ -1.32
BRCA1-205ENST00000461221 C7orf33Q8WU49 177 aa6.83□□□□□ -1.32
BRCA1-205ENST00000461221 SIPA1L1O43166 1804 aa6.83□□□□□ -1.32
BRCA1-205ENST00000461221 ZNF524Q96C55 264 aa6.83□□□□□ -1.32
BRCA1-205ENST00000461221 MLST8Q9BVC4 326 aa6.83□□□□□ -1.32
BRCA1-205ENST00000461221 SPRY4Q9C004 299 aa6.83□□□□□ -1.32
BRCA1-205ENST00000461221 IGKV1D-37A0A075B6S9 117 aa6.83□□□□□ -1.32
BRCA1-205ENST00000461221 PLXNA3P51805 1871 aa6.83□□□□□ -1.32
BRCA1-205ENST00000461221 TNRC6AQ8NDV7 1962 aaKnown RBP6.83□□□□□ -1.32
BRCA1-205ENST00000461221 DOCK10Q96BY6 2186 aa6.83□□□□□ -1.32
BRCA1-205ENST00000461221 HILS1P60008 231 aa6.83□□□□□ -1.32
BRCA1-205ENST00000461221 A0A096LNI7 61 aa6.82□□□□□ -1.32
BRCA1-205ENST00000461221 A0A0U1RQV1 116 aa6.82□□□□□ -1.32
BRCA1-205ENST00000461221 LRCOL1A6NCL2 159 aa6.82□□□□□ -1.32
BRCA1-205ENST00000461221 A6NDX4 124 aa6.82□□□□□ -1.32
BRCA1-205ENST00000461221 IGF2-ASQ6U949 168 aa6.82□□□□□ -1.32
BRCA1-205ENST00000461221 SCXQ7RTU7 201 aa6.82□□□□□ -1.32
BRCA1-205ENST00000461221 EML6Q6ZMW3 1958 aa6.82□□□□□ -1.32
BRCA1-205ENST00000461221 PIK3CD-AS1Q5SR53 167 aa6.82□□□□□ -1.32
BRCA1-205ENST00000461221 CEMP1Q6PRD7 247 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-205ENST00000461221 Q8N9L7 120 aa6.82□□□□□ -1.32
BRCA1-205ENST00000461221 WFDC11Q8NEX6 87 aa6.82□□□□□ -1.32
BRCA1-205ENST00000461221 IGLV1-47P01700 117 aa6.82□□□□□ -1.32
BRCA1-205ENST00000461221 A6NED7 52 aa6.81□□□□□ -1.32
BRCA1-205ENST00000461221 TNRC6BQ9UPQ9 1833 aaKnown RBP6.81□□□□□ -1.32
BRCA1-205ENST00000461221 P0DMU3 169 aa6.81□□□□□ -1.32
BRCA1-205ENST00000461221 FAM231AP0DMU4 169 aa6.81□□□□□ -1.32
BRCA1-205ENST00000461221 FAM231CP0DMU5 169 aa6.81□□□□□ -1.32
BRCA1-205ENST00000461221 CADP27708 2225 aa6.81□□□□□ -1.32
BRCA1-205ENST00000461221 Q8N7P7 452 aa6.81□□□□□ -1.32
BRCA1-205ENST00000461221 MT-ATP8P03928 68 aa6.81□□□□□ -1.32
BRCA1-205ENST00000461221 TMEM223A0PJW6 202 aa6.81□□□□□ -1.32
BRCA1-205ENST00000461221 FAM19A3Q7Z5A8 133 aa6.81□□□□□ -1.32
BRCA1-205ENST00000461221 CACNA1EQ15878 2313 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 SBF1O95248 1867 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 UBE2D1P51668 147 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 CCKP06307 115 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 DHRS4-AS1Q9P1J3 65 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 TRBV30A0A0K0K1B3 111 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 UNQ9165/PRO28630Q6UXU0 137 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 NEXN-AS1Q8NBZ9 246 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 LINC00308Q8TCZ7 52 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 A0A1B0GXF2 115 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 Q6ZTI0 123 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 LYPD6Q86Y78 171 aa6.8□□□□□ -1.32
BRCA1-205ENST00000461221 FAM19A5Q7Z5A7 132 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-205ENST00000461221 PLXNA4Q9HCM2 1894 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 MED12Q93074 2177 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 ZFP36P26651 326 aaKnown RBP6.79□□□□□ -1.32
BRCA1-205ENST00000461221 LINC00467Q9BRT7 94 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 DEFB1P60022 68 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 FAM222AQ5U5X8 452 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 SERP2Q8N6R1 65 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 DEFB131BA0A096LNP1 70 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 DNAJC9-AS1A6NH13 148 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 ADORA2A-AS1P86434 159 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 LINC00322Q6ZN03 302 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-205ENST00000461221 ODF3L1Q8IXM7 274 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 C9orf85Q96MD7 179 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 SLPIP03973 132 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 IMUPQ9GZP8 106 aa6.79□□□□□ -1.32
BRCA1-205ENST00000461221 SYCNQ0VAF6 134 aa6.78□□□□□ -1.32
BRCA1-205ENST00000461221 NCKAP5O14513 1909 aa6.78□□□□□ -1.32
BRCA1-205ENST00000461221 ZSWIM8A7E2V4 1837 aa6.78□□□□□ -1.32
BRCA1-205ENST00000461221 ZNF22P17026 224 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-205ENST00000461221 C1orf158Q8N1D5 194 aa6.78□□□□□ -1.32
BRCA1-205ENST00000461221 PLA2G2EQ9NZK7 142 aa6.78□□□□□ -1.32
BRCA1-205ENST00000461221 BRWD3Q6RI45 1802 aa6.78□□□□□ -1.32
BRCA1-205ENST00000461221 TNFRSF13BO14836 293 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-205ENST00000461221 CDKN2A-AS1Q9UH64 79 aa6.78□□□□□ -1.32
BRCA1-205ENST00000461221 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-205ENST00000461221 UBE2D4Q9Y2X8 147 aa6.77□□□□□ -1.33
BRCA1-205ENST00000461221 DOCK7Q96N67 2140 aa6.77□□□□□ -1.33
BRCA1-205ENST00000461221 IGLV4-3A0A075B6K6 122 aa6.77□□□□□ -1.33
BRCA1-205ENST00000461221 MYLKQ15746 1914 aa6.77□□□□□ -1.33
BRCA1-205ENST00000461221 CHD3Q12873 2000 aaKnown RBP6.77□□□□□ -1.33
BRCA1-205ENST00000461221 NDUFA7O95182 113 aa6.77□□□□□ -1.33
BRCA1-205ENST00000461221 TP53TG3Q9ULZ0 132 aa6.77□□□□□ -1.33
BRCA1-205ENST00000461221 DIDO1Q9BTC0 2240 aaKnown RBP6.77□□□□□ -1.33
BRCA1-205ENST00000461221 SIP14410 1827 aa6.77□□□□□ -1.33
BRCA1-205ENST00000461221 TRIAP1O43715 76 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 TIMM17BO60830 172 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 MIFP14174 115 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 LOXL1Q08397 574 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-205ENST00000461221 CCDC140Q96MF4 163 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 TICRRQ7Z2Z1 1910 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 M0R378 163 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 A0A0J9YWU9 116 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 C6orf99Q4VX62 202 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms