RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 CHCHD5Q9BSY4 110 aa9.51□□□□□ -0.89
SMPD4-216ENST00000461187 VAX2Q9UIW0 290 aa9.51□□□□□ -0.89
SMPD4-216ENST00000461187 A0A1B0GV50 99 aa9.5□□□□□ -0.89
SMPD4-216ENST00000461187 HLA-DQA1P01909 254 aa9.5□□□□□ -0.89
SMPD4-216ENST00000461187 PKIAP61925 76 aa9.5□□□□□ -0.89
SMPD4-216ENST00000461187 MIAQ16674 131 aa9.5□□□□□ -0.89
SMPD4-216ENST00000461187 SPANXN1Q5VSR9 72 aa9.5□□□□□ -0.89
SMPD4-216ENST00000461187 FAM213BQ8TBF2 198 aa9.5□□□□□ -0.89
SMPD4-216ENST00000461187 KIF25-AS1Q9Y6Z4 181 aa9.5□□□□□ -0.89
SMPD4-216ENST00000461187 F5H697 171 aa9.49□□□□□ -0.89
SMPD4-216ENST00000461187 SMLR1H3BR10 107 aa9.49□□□□□ -0.89
SMPD4-216ENST00000461187 PRSS1P07477 247 aa9.49□□□□□ -0.89
SMPD4-216ENST00000461187 SERTAD4-AS1Q5TG53 156 aa9.49□□□□□ -0.89
SMPD4-216ENST00000461187 KRTAP26-1Q6PEX3 210 aa9.49□□□□□ -0.89
SMPD4-216ENST00000461187 KCNRGQ8N5I3 272 aa9.49□□□□□ -0.89
SMPD4-216ENST00000461187 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.49□□□□□ -0.89
SMPD4-216ENST00000461187 PRR34Q9NV39 138 aa9.49□□□□□ -0.89
SMPD4-216ENST00000461187 UMAD1C9J7I0 102 aa9.48□□□□□ -0.89
SMPD4-216ENST00000461187 PFDN1O60925 122 aa9.48□□□□□ -0.89
SMPD4-216ENST00000461187 SSTP61278 116 aa9.48□□□□□ -0.89
SMPD4-216ENST00000461187 RBX1P62877 108 aa9.48□□□□□ -0.89
SMPD4-216ENST00000461187 ZNF345Q14585 488 aa9.48□□□□□ -0.89
SMPD4-216ENST00000461187 TMEM97Q5BJF2 176 aa9.48□□□□□ -0.89
SMPD4-216ENST00000461187 DGAT2L7PQ6IED9 249 aa9.48□□□□□ -0.89
SMPD4-216ENST00000461187 C9orf163Q8N9P6 203 aa9.48□□□□□ -0.89
SMPD4-216ENST00000461187 RPL37AP61513 92 aaKnown RBP9.47□□□□□ -0.89
SMPD4-216ENST00000461187 CLPSL2Q6UWE3 100 aa9.47□□□□□ -0.89
SMPD4-216ENST00000461187 TMUB2Q71RG4 321 aa9.47□□□□□ -0.89
SMPD4-216ENST00000461187 DERL1Q9BUN8 251 aa9.47□□□□□ -0.89
SMPD4-216ENST00000461187 TRBV25-1A0A075B6N4 114 aa9.46□□□□□ -0.9
SMPD4-216ENST00000461187 SMIM17P0DL12 118 aa9.46□□□□□ -0.9
SMPD4-216ENST00000461187 GAGE6Q13070 117 aa9.46□□□□□ -0.9
SMPD4-216ENST00000461187 LINC00269Q8N2A0 174 aa9.46□□□□□ -0.9
SMPD4-216ENST00000461187 AP1S3Q96PC3 154 aa9.46□□□□□ -0.9
SMPD4-216ENST00000461187 HMCN2Q8NDA2 5059 aa9.46□□□□□ -0.9
SMPD4-216ENST00000461187 RPL35P42766 123 aaKnown RBP9.45□□□□□ -0.9
SMPD4-216ENST00000461187 HNRNPA3P51991 378 aaKnown RBP9.45□□□□□ -0.9
SMPD4-216ENST00000461187 IQCJQ1A5X6 159 aa9.45□□□□□ -0.9
SMPD4-216ENST00000461187 RGS21Q2M5E4 152 aa9.45□□□□□ -0.9
SMPD4-216ENST00000461187 DAZAP1Q96EP5 407 aaKnown RBP9.45□□□□□ -0.9
SMPD4-216ENST00000461187 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.45□□□□□ -0.9
SMPD4-216ENST00000461187 PANO1I0J062 215 aa9.44□□□□□ -0.9
SMPD4-216ENST00000461187 M0QY20 66 aa9.44□□□□□ -0.9
SMPD4-216ENST00000461187 H2AFB1P0C5Y9 115 aa9.44□□□□□ -0.9
SMPD4-216ENST00000461187 IGHV1-24A0A0C4DH33 117 aa9.43□□□□□ -0.9
SMPD4-216ENST00000461187 HMSDA8MTL9 139 aa9.43□□□□□ -0.9
SMPD4-216ENST00000461187 IGLC6P0CF74 106 aa9.43□□□□□ -0.9
SMPD4-216ENST00000461187 GZMBP10144 247 aa9.43□□□□□ -0.9
SMPD4-216ENST00000461187 SDIM1Q6ZPB5 146 aa9.43□□□□□ -0.9
SMPD4-216ENST00000461187 C11orf52Q96A22 123 aa9.43□□□□□ -0.9
SMPD4-216ENST00000461187 A0A0D9SG52 128 aa9.42□□□□□ -0.9
SMPD4-216ENST00000461187 BCL2L11O43521 198 aa9.42□□□□□ -0.9
SMPD4-216ENST00000461187 MGPP08493 103 aa9.42□□□□□ -0.9
SMPD4-216ENST00000461187 CCL20P78556 96 aa9.42□□□□□ -0.9
SMPD4-216ENST00000461187 REG3AQ06141 175 aa9.42□□□□□ -0.9
SMPD4-216ENST00000461187 SUMO4Q6EEV6 95 aa9.42□□□□□ -0.9
SMPD4-216ENST00000461187 C20orf203Q8NBC4 194 aa9.42□□□□□ -0.9
SMPD4-216ENST00000461187 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
SMPD4-216ENST00000461187 IGLV10-54A0A075B6I4 117 aa9.41□□□□□ -0.9
SMPD4-216ENST00000461187 KANTRA0A1W2PQU2 76 aa9.41□□□□□ -0.9
SMPD4-216ENST00000461187 CENPWQ5EE01 88 aa9.41□□□□□ -0.9
SMPD4-216ENST00000461187 FER1L6-AS1Q8NA97 138 aa9.41□□□□□ -0.9
SMPD4-216ENST00000461187 TPPP3Q9BW30 176 aa9.41□□□□□ -0.9
SMPD4-216ENST00000461187 A0A1B0GUV1 79 aa9.4□□□□□ -0.9
SMPD4-216ENST00000461187 C19orf71A6NCJ1 209 aa9.4□□□□□ -0.9
SMPD4-216ENST00000461187 H7C1H1 209 aa9.4□□□□□ -0.9
SMPD4-216ENST00000461187 NKX2-5P52952 324 aaPredicted RBP9.4□□□□□ -0.9
SMPD4-216ENST00000461187 CNBPP62633 177 aaKnown RBP9.4□□□□□ -0.9
SMPD4-216ENST00000461187 OR2D3Q8NGH3 330 aa9.4□□□□□ -0.9
SMPD4-216ENST00000461187 GFRA4Q9GZZ7 299 aa9.4□□□□□ -0.9
SMPD4-216ENST00000461187 MANBALQ9NQG1 85 aa9.4□□□□□ -0.9
SMPD4-216ENST00000461187 GNG13Q9P2W3 67 aa9.4□□□□□ -0.9
SMPD4-216ENST00000461187 PLA2G2DQ9UNK4 145 aa9.4□□□□□ -0.9
SMPD4-216ENST00000461187 IGLV4-60A0A075B6I1 120 aa9.39□□□□□ -0.91
SMPD4-216ENST00000461187 TRAV8-4A0A0B4J246 113 aa9.39□□□□□ -0.91
SMPD4-216ENST00000461187 TRAV1-1A0A0B4J248 108 aa9.39□□□□□ -0.91
SMPD4-216ENST00000461187 P01737 135 aa9.39□□□□□ -0.91
SMPD4-216ENST00000461187 RPS20P60866 119 aaKnown RBP9.39□□□□□ -0.91
SMPD4-216ENST00000461187 CACNG7P62955 275 aa9.39□□□□□ -0.91
SMPD4-216ENST00000461187 EIF5AP63241 154 aaKnown RBP9.39□□□□□ -0.91
SMPD4-216ENST00000461187 CIRBPQ14011 172 aaKnown RBP9.39□□□□□ -0.91
SMPD4-216ENST00000461187 TMEM243Q9BU79 118 aa9.39□□□□□ -0.91
SMPD4-216ENST00000461187 UBR4Q5T4S7 5183 aa9.38□□□□□ -0.91
SMPD4-216ENST00000461187 hDV102S1A0JD36 115 aa9.38□□□□□ -0.91
SMPD4-216ENST00000461187 RAB19A4D1S5 217 aa9.38□□□□□ -0.91
SMPD4-216ENST00000461187 SLPIP03973 132 aa9.38□□□□□ -0.91
SMPD4-216ENST00000461187 RASL11AQ6T310 242 aa9.38□□□□□ -0.91
SMPD4-216ENST00000461187 PGLYRP4Q96LB8 373 aa9.38□□□□□ -0.91
SMPD4-216ENST00000461187 F2Z2F3 143 aa9.37□□□□□ -0.91
SMPD4-216ENST00000461187 SMIM12Q96EX1 92 aa9.37□□□□□ -0.91
SMPD4-216ENST00000461187 NIT2Q9NQR4 276 aa9.37□□□□□ -0.91
SMPD4-216ENST00000461187 MT1HL1P0DM35 61 aa9.36□□□□□ -0.91
SMPD4-216ENST00000461187 NTF3P20783 257 aa9.36□□□□□ -0.91
SMPD4-216ENST00000461187 RAB5CP51148 216 aa9.36□□□□□ -0.91
SMPD4-216ENST00000461187 LYZL1Q6UWQ5 148 aa9.36□□□□□ -0.91
SMPD4-216ENST00000461187 DPH3P1Q9H4G8 78 aa9.36□□□□□ -0.91
SMPD4-216ENST00000461187 TRBV20OR9-2A0A075B6H5 130 aa9.35□□□□□ -0.91
SMPD4-216ENST00000461187 IGHV3-64A0A075B6Q5 118 aa9.35□□□□□ -0.91
SMPD4-216ENST00000461187 XKRY2A2RUG3 117 aa9.35□□□□□ -0.91
SMPD4-216ENST00000461187 TRGC1P0CF51 173 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms