RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 GAGE1Q13065 139 aa10□□□□□ -0.81
NCK1-202ENST00000460960 GAGE4Q13068 117 aa10□□□□□ -0.81
NCK1-202ENST00000460960 GAGE5Q13069 117 aa10□□□□□ -0.81
NCK1-202ENST00000460960 RHOHQ15669 191 aa10□□□□□ -0.81
NCK1-202ENST00000460960 TWIST1Q15672 202 aa10□□□□□ -0.81
NCK1-202ENST00000460960 ZNF56Q15929 161 aa10□□□□□ -0.81
NCK1-202ENST00000460960 MRPL23Q16540 153 aaKnown RBP10□□□□□ -0.81
NCK1-202ENST00000460960 GAGE13Q4V321 117 aa10□□□□□ -0.81
NCK1-202ENST00000460960 NUP35Q8NFH5 326 aa10□□□□□ -0.81
NCK1-202ENST00000460960 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
NCK1-202ENST00000460960 F8W036 122 aa9.99□□□□□ -0.81
NCK1-202ENST00000460960 MGPP08493 103 aa9.99□□□□□ -0.81
NCK1-202ENST00000460960 SRIP30626 198 aa9.99□□□□□ -0.81
NCK1-202ENST00000460960 WDR73Q6P4I2 378 aa9.99□□□□□ -0.81
NCK1-202ENST00000460960 LYPD5Q6UWN5 251 aa9.99□□□□□ -0.81
NCK1-202ENST00000460960 PRADC1Q9BSG0 188 aa9.99□□□□□ -0.81
NCK1-202ENST00000460960 GFRA4Q9GZZ7 299 aa9.99□□□□□ -0.81
NCK1-202ENST00000460960 PGPEP1Q9NXJ5 209 aa9.99□□□□□ -0.81
NCK1-202ENST00000460960 RAB4BP61018 213 aa9.98□□□□□ -0.81
NCK1-202ENST00000460960 NEGR1Q7Z3B1 354 aa9.98□□□□□ -0.81
NCK1-202ENST00000460960 FAM231BA6NCW3 169 aa9.97□□□□□ -0.81
NCK1-202ENST00000460960 F5H697 171 aa9.97□□□□□ -0.81
NCK1-202ENST00000460960 XGP55808 180 aa9.97□□□□□ -0.81
NCK1-202ENST00000460960 PNRC1Q12796 327 aaPredicted RBP9.97□□□□□ -0.81
NCK1-202ENST00000460960 SUMO4Q6EEV6 95 aa9.97□□□□□ -0.81
NCK1-202ENST00000460960 FLG2Q5D862 2391 aaPredicted RBP9.97□□□□□ -0.81
NCK1-202ENST00000460960 TRAV26-2A0A0B4J265 109 aa9.96□□□□□ -0.82
NCK1-202ENST00000460960 A0A1B0GUT8 65 aa9.96□□□□□ -0.82
NCK1-202ENST00000460960 SMR3BP02814 79 aaPredicted RBP9.96□□□□□ -0.82
NCK1-202ENST00000460960 TRGC1P0CF51 173 aa9.96□□□□□ -0.82
NCK1-202ENST00000460960 SMIM17P0DL12 118 aa9.96□□□□□ -0.82
NCK1-202ENST00000460960 C10orf91Q5T1B1 145 aa9.96□□□□□ -0.82
NCK1-202ENST00000460960 NEXN-AS1Q8NBZ9 246 aa9.96□□□□□ -0.82
NCK1-202ENST00000460960 SEC11CQ9BY50 192 aa9.96□□□□□ -0.82
NCK1-202ENST00000460960 DPH3P1Q9H4G8 78 aa9.96□□□□□ -0.82
NCK1-202ENST00000460960 M0QY20 66 aa9.95□□□□□ -0.82
NCK1-202ENST00000460960 SIVA1O15304 175 aa9.95□□□□□ -0.82
NCK1-202ENST00000460960 GAS8-AS1O95177 125 aa9.95□□□□□ -0.82
NCK1-202ENST00000460960 CDPF1Q6NVV7 123 aa9.95□□□□□ -0.82
NCK1-202ENST00000460960 Q6ZRN7 208 aaPredicted RBP9.95□□□□□ -0.82
NCK1-202ENST00000460960 NAT8BQ9UHF3 227 aa9.95□□□□□ -0.82
NCK1-202ENST00000460960 DNAH10OSP0CZ25 163 aa9.94□□□□□ -0.82
NCK1-202ENST00000460960 WFDC10BQ8IUB3 73 aa9.94□□□□□ -0.82
NCK1-202ENST00000460960 SLC7A5P1Q8MH63 180 aa9.94□□□□□ -0.82
NCK1-202ENST00000460960 ATP6V0E2Q8NHE4 81 aa9.94□□□□□ -0.82
NCK1-202ENST00000460960 RNF185Q96GF1 192 aa9.94□□□□□ -0.82
NCK1-202ENST00000460960 TNFRSF18Q9Y5U5 241 aa9.94□□□□□ -0.82
NCK1-202ENST00000460960 IGHV3-38A0A0C4DH36 116 aa9.93□□□□□ -0.82
NCK1-202ENST00000460960 KRTAP10-1P60331 282 aa9.93□□□□□ -0.82
NCK1-202ENST00000460960 UBE2D3P61077 147 aa9.93□□□□□ -0.82
NCK1-202ENST00000460960 UBE2D2P62837 147 aa9.93□□□□□ -0.82
NCK1-202ENST00000460960 MRPL54Q6P161 138 aaKnown RBP9.93□□□□□ -0.82
NCK1-202ENST00000460960 GATD1Q8NB37 220 aa9.93□□□□□ -0.82
NCK1-202ENST00000460960 CARHSP1Q9Y2V2 147 aaKnown RBP9.93□□□□□ -0.82
NCK1-202ENST00000460960 FAT1Q14517 4588 aa9.93□□□□□ -0.82
NCK1-202ENST00000460960 TRBV10-1A0A0K0K1A3 114 aa9.92□□□□□ -0.82
NCK1-202ENST00000460960 J3QL48 77 aa9.92□□□□□ -0.82
NCK1-202ENST00000460960 MT-ND4LP03901 98 aa9.92□□□□□ -0.82
NCK1-202ENST00000460960 HAMPP81172 84 aa9.92□□□□□ -0.82
NCK1-202ENST00000460960 AMN1Q8IY45 258 aa9.92□□□□□ -0.82
NCK1-202ENST00000460960 Q8N3U1 123 aa9.92□□□□□ -0.82
NCK1-202ENST00000460960 BORCS7Q96B45 105 aa9.92□□□□□ -0.82
NCK1-202ENST00000460960 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
NCK1-202ENST00000460960 TRBV7-3A0A075B6L6 115 aa9.91□□□□□ -0.82
NCK1-202ENST00000460960 A0A1B0GXF2 115 aa9.91□□□□□ -0.82
NCK1-202ENST00000460960 PPP1R2P9O14990 202 aa9.91□□□□□ -0.82
NCK1-202ENST00000460960 CAMPP49913 170 aa9.91□□□□□ -0.82
NCK1-202ENST00000460960 RIGQ13278 110 aa9.91□□□□□ -0.82
NCK1-202ENST00000460960 DEFB104AQ8WTQ1 72 aa9.91□□□□□ -0.82
NCK1-202ENST00000460960 ANAPC16Q96DE5 110 aa9.91□□□□□ -0.82
NCK1-202ENST00000460960 TMEM191AQ9H0A3 160 aa9.91□□□□□ -0.82
NCK1-202ENST00000460960 GTSF1LQ9H1H1 148 aa9.91□□□□□ -0.82
NCK1-202ENST00000460960 SMKR1H3BMG3 65 aa9.9□□□□□ -0.82
NCK1-202ENST00000460960 FAM229AH3BQW9 127 aa9.9□□□□□ -0.82
NCK1-202ENST00000460960 TIRAPP58753 221 aa9.9□□□□□ -0.82
NCK1-202ENST00000460960 RPL36AP83881 106 aaKnown RBP9.9□□□□□ -0.82
NCK1-202ENST00000460960 SH2D6Q7Z4S9 175 aa9.9□□□□□ -0.82
NCK1-202ENST00000460960 RPL36ALQ969Q0 106 aaKnown RBP9.9□□□□□ -0.82
NCK1-202ENST00000460960 A0A087WTM6 91 aa9.89□□□□□ -0.83
NCK1-202ENST00000460960 C7orf77A4D0Y5 90 aa9.89□□□□□ -0.83
NCK1-202ENST00000460960 RAB4AP20338 218 aa9.89□□□□□ -0.83
NCK1-202ENST00000460960 RPS10P46783 165 aaKnown RBP9.89□□□□□ -0.83
NCK1-202ENST00000460960 RASL11AQ6T310 242 aa9.89□□□□□ -0.83
NCK1-202ENST00000460960 NFE4Q86UQ8 179 aa9.89□□□□□ -0.83
NCK1-202ENST00000460960 CLRN3Q8NCR9 226 aa9.89□□□□□ -0.83
NCK1-202ENST00000460960 MYCBP2O75592 4640 aa9.89□□□□□ -0.83
NCK1-202ENST00000460960 NCR2O95944 276 aa9.88□□□□□ -0.83
NCK1-202ENST00000460960 GCSHP23434 173 aa9.88□□□□□ -0.83
NCK1-202ENST00000460960 LELP1Q5T871 98 aa9.88□□□□□ -0.83
NCK1-202ENST00000460960 NTM-AS1Q6ZSK4 140 aa9.88□□□□□ -0.83
NCK1-202ENST00000460960 SMIM15Q7Z3B0 74 aa9.88□□□□□ -0.83
NCK1-202ENST00000460960 KRTAP3-3Q9BYR6 98 aa9.88□□□□□ -0.83
NCK1-202ENST00000460960 KRTAP3-2Q9BYR7 98 aa9.88□□□□□ -0.83
NCK1-202ENST00000460960 APOC3P02656 99 aa9.87□□□□□ -0.83
NCK1-202ENST00000460960 HBBP68871 147 aa9.87□□□□□ -0.83
NCK1-202ENST00000460960 OR10J3Q5JRS4 329 aa9.87□□□□□ -0.83
NCK1-202ENST00000460960 NIT2Q9NQR4 276 aa9.87□□□□□ -0.83
NCK1-202ENST00000460960 VPS13BQ7Z7G8 4022 aa9.87□□□□□ -0.83
NCK1-202ENST00000460960 TRAV9-2A0A087WT02 112 aa9.86□□□□□ -0.83
NCK1-202ENST00000460960 H7C1H1 209 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms