RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 C16orf74Q96GX8 76 aa11.22□□□□□ -0.61
PTPRU-205ENST00000460170 MYO9AB2RTY4 2548 aa11.22□□□□□ -0.61
PTPRU-205ENST00000460170 HERV-K104P63124 156 aa11.22□□□□□ -0.61
PTPRU-205ENST00000460170 DAZ2Q13117 558 aaKnown RBP11.21□□□□□ -0.61
PTPRU-205ENST00000460170 CLPSL2Q6UWE3 100 aa11.21□□□□□ -0.61
PTPRU-205ENST00000460170 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.61
PTPRU-205ENST00000460170 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.61
PTPRU-205ENST00000460170 UBE2DNLQ8IWF7 75 aa11.21□□□□□ -0.61
PTPRU-205ENST00000460170 XCL1P47992 114 aa11.21□□□□□ -0.62
PTPRU-205ENST00000460170 IGLV2-11P01706 119 aa11.21□□□□□ -0.62
PTPRU-205ENST00000460170 RNASE8Q8TDE3 154 aaKnown RBP11.21□□□□□ -0.62
PTPRU-205ENST00000460170 TRAV25A0A0B4J276 109 aa11.2□□□□□ -0.62
PTPRU-205ENST00000460170 C20orf203Q8NBC4 194 aa11.2□□□□□ -0.62
PTPRU-205ENST00000460170 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
PTPRU-205ENST00000460170 PRORYQ9H606 182 aa11.19□□□□□ -0.62
PTPRU-205ENST00000460170 TRBV7-3A0A075B6L6 115 aa11.19□□□□□ -0.62
PTPRU-205ENST00000460170 A0A0J9YY99 117 aa11.19□□□□□ -0.62
PTPRU-205ENST00000460170 C5orf38Q86SI9 138 aa11.19□□□□□ -0.62
PTPRU-205ENST00000460170 C4orf3Q8WVX3 66 aa11.18□□□□□ -0.62
PTPRU-205ENST00000460170 WFDC2Q14508 124 aa11.18□□□□□ -0.62
PTPRU-205ENST00000460170 Q8N6K4 173 aa11.17□□□□□ -0.62
PTPRU-205ENST00000460170 C20orf173Q96LM9 149 aa11.17□□□□□ -0.62
PTPRU-205ENST00000460170 PSCAO43653 123 aa11.16□□□□□ -0.62
PTPRU-205ENST00000460170 ANKRD29Q8N6D5 301 aa11.16□□□□□ -0.62
PTPRU-205ENST00000460170 ATP6V0E2Q8NHE4 81 aa11.16□□□□□ -0.62
PTPRU-205ENST00000460170 ODF3Q96PU9 254 aa11.16□□□□□ -0.62
PTPRU-205ENST00000460170 GYPEP15421 78 aa11.16□□□□□ -0.62
PTPRU-205ENST00000460170 EML5Q05BV3 1969 aa11.16□□□□□ -0.62
PTPRU-205ENST00000460170 K7EQG2 157 aa11.16□□□□□ -0.62
PTPRU-205ENST00000460170 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
PTPRU-205ENST00000460170 HIVEP3Q5T1R4 2406 aa11.15□□□□□ -0.62
PTPRU-205ENST00000460170 Q6ZQT7 251 aa11.15□□□□□ -0.62
PTPRU-205ENST00000460170 CPAMD8Q8IZJ3 1885 aa11.15□□□□□ -0.62
PTPRU-205ENST00000460170 CEP295Q9C0D2 2601 aa11.15□□□□□ -0.62
PTPRU-205ENST00000460170 COL5A1P20908 1838 aaPredicted RBP11.15□□□□□ -0.62
PTPRU-205ENST00000460170 ARHGAP32A7KAX9 2087 aa11.15□□□□□ -0.62
PTPRU-205ENST00000460170 ZFAND2AQ8N6M9 145 aa11.15□□□□□ -0.62
PTPRU-205ENST00000460170 U3KQK5 164 aa11.15□□□□□ -0.62
PTPRU-205ENST00000460170 SORL1Q92673 2214 aa11.15□□□□□ -0.63
PTPRU-205ENST00000460170 DSCAML1Q8TD84 2053 aa11.14□□□□□ -0.63
PTPRU-205ENST00000460170 C9orf66Q5T8R8 295 aa11.14□□□□□ -0.63
PTPRU-205ENST00000460170 TP73-AS1Q9UF72 201 aa11.14□□□□□ -0.63
PTPRU-205ENST00000460170 VSIG2Q96IQ7 327 aa11.14□□□□□ -0.63
PTPRU-205ENST00000460170 BAALC-AS2P0C853 105 aa11.14□□□□□ -0.63
PTPRU-205ENST00000460170 TEN1Q86WV5 123 aa11.14□□□□□ -0.63
PTPRU-205ENST00000460170 MAP6D1Q9H9H5 199 aa11.14□□□□□ -0.63
PTPRU-205ENST00000460170 ICOSQ9Y6W8 199 aa11.14□□□□□ -0.63
PTPRU-205ENST00000460170 RNF185Q96GF1 192 aa11.13□□□□□ -0.63
PTPRU-205ENST00000460170 F8WEM9 126 aa11.13□□□□□ -0.63
PTPRU-205ENST00000460170 CRLF1O75462 422 aa11.13□□□□□ -0.63
PTPRU-205ENST00000460170 C15orf53Q8NAA6 179 aa11.13□□□□□ -0.63
PTPRU-205ENST00000460170 UBL5Q9BZL1 73 aa11.13□□□□□ -0.63
PTPRU-205ENST00000460170 LGALS9O00182 355 aa11.13□□□□□ -0.63
PTPRU-205ENST00000460170 LINC01620Q4KN68 170 aa11.13□□□□□ -0.63
PTPRU-205ENST00000460170 NKAPP1Q8N9T2 125 aa11.12□□□□□ -0.63
PTPRU-205ENST00000460170 PIFOQ8TCI5 191 aa11.12□□□□□ -0.63
PTPRU-205ENST00000460170 SND1-IT1Q9HBX3 110 aa11.12□□□□□ -0.63
PTPRU-205ENST00000460170 IGHV1-58A0A0C4DH39 117 aa11.12□□□□□ -0.63
PTPRU-205ENST00000460170 DAND5Q8N907 189 aa11.12□□□□□ -0.63
PTPRU-205ENST00000460170 IGHV3-30-3P0DP02 117 aa11.11□□□□□ -0.63
PTPRU-205ENST00000460170 TRAV4A0A0B4J268 109 aa11.11□□□□□ -0.63
PTPRU-205ENST00000460170 NEXN-AS1Q8NBZ9 246 aa11.11□□□□□ -0.63
PTPRU-205ENST00000460170 COX7B2Q8TF08 81 aa11.11□□□□□ -0.63
PTPRU-205ENST00000460170 RPL32P62910 135 aaKnown RBP11.11□□□□□ -0.63
PTPRU-205ENST00000460170 Q6YL49 198 aa11.11□□□□□ -0.63
PTPRU-205ENST00000460170 TMEM263Q8WUH6 116 aaKnown RBP11.11□□□□□ -0.63
PTPRU-205ENST00000460170 TRBV10-1A0A0K0K1A3 114 aa11.11□□□□□ -0.63
PTPRU-205ENST00000460170 SPANXDQ9BXN6 97 aa11.11□□□□□ -0.63
PTPRU-205ENST00000460170 SS18L2Q9UHA2 77 aa11.11□□□□□ -0.63
PTPRU-205ENST00000460170 ATP5G1P05496 136 aa11.1□□□□□ -0.63
PTPRU-205ENST00000460170 CEMP1Q6PRD7 247 aaPredicted RBP11.1□□□□□ -0.63
PTPRU-205ENST00000460170 B5MCH6 92 aa11.1□□□□□ -0.63
PTPRU-205ENST00000460170 MRPL23Q16540 153 aaKnown RBP11.1□□□□□ -0.63
PTPRU-205ENST00000460170 TINCRA0A1B0GVN0 87 aa11.09□□□□□ -0.63
PTPRU-205ENST00000460170 HHLA3Q9XRX5 114 aa11.09□□□□□ -0.63
PTPRU-205ENST00000460170 ABCA2Q9BZC7 2435 aa11.09□□□□□ -0.63
PTPRU-205ENST00000460170 SPART-AS1P0CW21 52 aa11.09□□□□□ -0.63
PTPRU-205ENST00000460170 P0DMU3 169 aa11.09□□□□□ -0.63
PTPRU-205ENST00000460170 FAM231AP0DMU4 169 aa11.09□□□□□ -0.63
PTPRU-205ENST00000460170 FAM231CP0DMU5 169 aa11.09□□□□□ -0.63
PTPRU-205ENST00000460170 DNAJC9-AS1A6NH13 148 aa11.09□□□□□ -0.63
PTPRU-205ENST00000460170 LINC00310P59036 64 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 IGLV10-54A0A075B6I4 117 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 CDSNQ15517 529 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 NDUFA11Q86Y39 141 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 DNAH12Q6ZR08 3092 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 IGKV2D-26A0A0A0MRZ7 120 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 H0YGX0 51 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 IGHV4-31P0DP07 118 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 HAMPP81172 84 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 Q6ZUT4 128 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 COX7A2LO14548 114 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
PTPRU-205ENST00000460170 HIST2H2BCQ6DN03 193 aa11.07□□□□□ -0.64
PTPRU-205ENST00000460170 TM2D2Q9BX73 214 aa11.07□□□□□ -0.64
PTPRU-205ENST00000460170 FOXI1Q12951 378 aa11.07□□□□□ -0.64
PTPRU-205ENST00000460170 LRRC75A-AS1Q8N1F1 130 aa11.07□□□□□ -0.64
PTPRU-205ENST00000460170 ORMDL1Q9P0S3 153 aa11.07□□□□□ -0.64
PTPRU-205ENST00000460170 MRAPQ8TCY5 172 aa11.07□□□□□ -0.64
PTPRU-205ENST00000460170 C11orf21Q9P2W6 132 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms