RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 RNF183Q96D59 192 aa6.95□□□□□ -1.3
SHROOM4-203ENST00000460112 ANKRD39Q53RE8 183 aa6.95□□□□□ -1.3
SHROOM4-203ENST00000460112 RS1O15537 224 aa6.95□□□□□ -1.3
SHROOM4-203ENST00000460112 IGHV4-28A0A0C4DH34 117 aa6.95□□□□□ -1.3
SHROOM4-203ENST00000460112 NDUFC1O43677 76 aa6.95□□□□□ -1.3
SHROOM4-203ENST00000460112 IGKV1-6A0A0C4DH72 117 aa6.95□□□□□ -1.3
SHROOM4-203ENST00000460112 H0Y9J4 135 aa6.95□□□□□ -1.3
SHROOM4-203ENST00000460112 MAPK1IP1LQ8NDC0 245 aa6.95□□□□□ -1.3
SHROOM4-203ENST00000460112 UPK3BQ9BT76 320 aa6.95□□□□□ -1.3
SHROOM4-203ENST00000460112 IGHV4-4A0A075B6R2 117 aa6.94□□□□□ -1.3
SHROOM4-203ENST00000460112 HHLA3Q9XRX5 114 aa6.94□□□□□ -1.3
SHROOM4-203ENST00000460112 MYCNOSP40205 109 aa6.94□□□□□ -1.3
SHROOM4-203ENST00000460112 RNASE13Q5GAN3 156 aaKnown RBP6.94□□□□□ -1.3
SHROOM4-203ENST00000460112 PRR30Q53SZ7 412 aaPredicted RBP6.94□□□□□ -1.3
SHROOM4-203ENST00000460112 C1orf195Q5TG92 126 aa6.94□□□□□ -1.3
SHROOM4-203ENST00000460112 PRSS33Q8NF86 280 aa6.94□□□□□ -1.3
SHROOM4-203ENST00000460112 A4D1N5 150 aa6.94□□□□□ -1.3
SHROOM4-203ENST00000460112 IGKV4-1P06312 121 aa6.94□□□□□ -1.3
SHROOM4-203ENST00000460112 ZNF491Q8N8L2 437 aa6.94□□□□□ -1.3
SHROOM4-203ENST00000460112 FGF23Q9GZV9 251 aaPredicted RBP6.94□□□□□ -1.3
SHROOM4-203ENST00000460112 IGHV1-58A0A0C4DH39 117 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 IGHV3-30P01768 117 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 IGHV3-33P01772 117 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 IGHV3-30-3P0DP02 117 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 IGHV3-30-5P0DP03 117 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 CTRLP40313 264 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 SMAD5-AS1Q9Y6J3 95 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 DEFB112Q30KQ8 113 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 Q8N1Y9 231 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 MLANAQ16655 118 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 NDUFA7O95182 113 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 FAM236DA0A1B0GTK5 79 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 FAM236CP0DP71 79 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 SEM1Q6ZVN7 128 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 TMEM61Q8N0U2 210 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 FAM120AOSQ5T036 256 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 C3orf22Q8N5N4 141 aa6.93□□□□□ -1.3
SHROOM4-203ENST00000460112 COX7BP24311 80 aa6.92□□□□□ -1.3
SHROOM4-203ENST00000460112 H7C423 109 aa6.92□□□□□ -1.3
SHROOM4-203ENST00000460112 IGF2-ASQ6U949 168 aa6.92□□□□□ -1.3
SHROOM4-203ENST00000460112 TMEM263Q8WUH6 116 aaKnown RBP6.92□□□□□ -1.3
SHROOM4-203ENST00000460112 K7EMT4 169 aa6.92□□□□□ -1.3
SHROOM4-203ENST00000460112 IGHV4-59P01825 116 aa6.92□□□□□ -1.3
SHROOM4-203ENST00000460112 WFDC2Q14508 124 aa6.92□□□□□ -1.3
SHROOM4-203ENST00000460112 FLG2Q5D862 2391 aaPredicted RBP6.92□□□□□ -1.3
SHROOM4-203ENST00000460112 C5orf38Q86SI9 138 aa6.92□□□□□ -1.3
SHROOM4-203ENST00000460112 DKK2Q9UBU2 259 aa6.92□□□□□ -1.3
SHROOM4-203ENST00000460112 GNRH2O43555 120 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 Q6ZR03 302 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 TRBV10-2A0A0K0K1G8 114 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 FSTL3O95633 263 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 LINC00205P59089 165 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 SPAG11BQ08648 103 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 C16orf54Q6UWD8 224 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 TOMM6Q96B49 74 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 C11orf86A6NJI1 115 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 PCP2Q8IVA1 136 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 ZNF706Q9Y5V0 76 aaPredicted RBP6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 USP17L23D6RBM5 183 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 LGALS9O00182 355 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 NCR3O14931 201 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 AGPAT4-IT1Q9H0P7 198 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 IGKV3D-7A0A0C4DH55 119 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 A0A0J9YXY3 114 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 SLURP1P55000 103 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 MPLKIPQ8TAP9 179 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 MUC7Q8TAX7 377 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 IGLV10-54A0A075B6I4 117 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 C17orf77Q96MU5 243 aa6.91□□□□□ -1.3
SHROOM4-203ENST00000460112 TPSG1Q9NRR2 321 aa6.9□□□□□ -1.3
SHROOM4-203ENST00000460112 CEP295Q9C0D2 2601 aa6.9□□□□□ -1.3
SHROOM4-203ENST00000460112 ZNRD1Q9P1U0 126 aa6.9□□□□□ -1.3
SHROOM4-203ENST00000460112 PLA2G2CQ5R387 149 aa6.9□□□□□ -1.31
SHROOM4-203ENST00000460112 CENPVL3A0A0U1RRI6 287 aa6.9□□□□□ -1.31
SHROOM4-203ENST00000460112 E9PLD3 99 aa6.9□□□□□ -1.31
SHROOM4-203ENST00000460112 RNF138Q8WVD3 245 aa6.9□□□□□ -1.31
SHROOM4-203ENST00000460112 LYRM9A8MSI8 78 aa6.9□□□□□ -1.31
SHROOM4-203ENST00000460112 WDR86Q86TI4 376 aa6.9□□□□□ -1.31
SHROOM4-203ENST00000460112 WISP1O95388 367 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 LINC00643Q86TS7 51 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 CLUHP3Q96NS8 147 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 PRB1P04280 392 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 GPHB5Q86YW7 130 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 TRBV10-1A0A0K0K1A3 114 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 ODF3Q96PU9 254 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 ZNF726P1Q15940 193 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 KRTAP27-1Q3LI81 207 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 UFSP1Q6NVU6 142 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 C7orf33Q8WU49 177 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 SPRY2O43597 315 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 APRG1Q8IVJ8 170 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 FAM215AQ9Y5M1 114 aa6.89□□□□□ -1.31
SHROOM4-203ENST00000460112 DEFB136Q30KP8 78 aa6.88□□□□□ -1.31
SHROOM4-203ENST00000460112 ZNF581Q9P0T4 197 aa6.88□□□□□ -1.31
SHROOM4-203ENST00000460112 IGLV2-23P01705 113 aa6.88□□□□□ -1.31
SHROOM4-203ENST00000460112 TDRG1Q3Y452 100 aa6.88□□□□□ -1.31
SHROOM4-203ENST00000460112 SMIM9A6NGZ8 99 aa6.88□□□□□ -1.31
SHROOM4-203ENST00000460112 C2orf70A6NJV1 201 aa6.88□□□□□ -1.31
SHROOM4-203ENST00000460112 IGLV11-55A0A075B6I3 123 aa6.88□□□□□ -1.31
SHROOM4-203ENST00000460112 CHD8Q9HCK8 2581 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms