RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 NACAE9PAV3 2078 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 A0A096LNT2 108 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 IGHV3-16A0A0C4DH30 117 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 A0A0J9YY99 117 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 GAGE12HA6NDE8 117 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 A8MTW9 85 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 H3BUX3 64 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 TSHBP01222 138 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 TRBV12-3P01733 135 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 MSMBP08118 114 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 SRSF9Q13242 221 aaKnown RBP eCLIP4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 WFDC2Q14508 124 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 CFAP126Q5VTH2 177 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 SUMO4Q6EEV6 95 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 TRPT1Q86TN4 253 aaKnown RBP4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 CLUHP3Q96NS8 147 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 MDFICQ9P1T7 246 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 TP53TG1Q9Y2A0 90 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 TLN2Q9Y4G6 2542 aa4.57□□□□□ -1.68
UBQLN4-202ENST00000459954 TRAV2A0A0B4J234 112 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 IGHV4-61A0A0C4DH41 118 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 SDHAF1A6NFY7 115 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 K7EQG2 157 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 LEPROTO15243 131 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 PSMB8P28062 276 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 SNRPD3P62318 126 aaKnown RBP4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 RPL11P62913 178 aaKnown RBP4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 SCGB1D4Q6XE38 83 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 NDUFA11Q86Y39 141 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 PLEKHB2Q96CS7 222 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 SPAG8Q99932 426 aaPredicted RBP4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 KLK15Q9H2R5 256 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 PGPEP1Q9NXJ5 209 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 PYGO1Q9Y3Y4 419 aa4.56□□□□□ -1.68
UBQLN4-202ENST00000459954 NSD1Q96L73 2696 aaPredicted RBP4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 TRGV11A0A075B6L2 103 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 IGHV1OR15-1A0A075B7D0 117 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 M0QY20 66 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 TSPAN13O95857 204 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 TGFAP01135 160 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 IGHV3-30P01768 117 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 IGHV3-30-5P0DP03 117 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 IGHV4-31P0DP07 118 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 ETDBQ3ZM63 59 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 BRD3OSQ6XYD6 125 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 MTURNQ8N3F0 131 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 C10orf126Q8N4M7 172 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 C20orf203Q8NBC4 194 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 RNF183Q96D59 192 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 AMELXQ99217 191 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 C1QTNF4Q9BXJ3 329 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 MRPL16Q9NX20 251 aaKnown RBP4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 LINC00527Q9UJ94 153 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 VPS13CQ709C8 3753 aa4.55□□□□□ -1.68
UBQLN4-202ENST00000459954 SETD2Q9BYW2 2564 aaPredicted RBP4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 MXRA5Q9NR99 2828 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 A0A0B4J2C4 111 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 TMEM223A0PJW6 202 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 F6UB75 175 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 I3L3M4 83 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 J3QQQ9 107 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 IGHV3-11P01762 117 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 ELANEP08246 267 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 CFC1BP0CG36 223 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 CFC1P0CG37 223 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 P0DMU3 169 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 FAM231AP0DMU4 169 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 FAM231CP0DMU5 169 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 IGHV4-38-2P0DP08 117 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 LGALS3P17931 250 aaKnown RBP4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 AZU1P20160 251 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 BLCAPP62952 87 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 FOXI1Q12951 378 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 TCTEX1D4Q5JR98 221 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 PPDPFLQ8WWR9 84 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 LINC00467Q9BRT7 94 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 PRO1854Q9UHT4 67 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 TSSC4Q9Y5U2 329 aaPredicted RBP4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 AKAP9Q99996 3911 aa4.54□□□□□ -1.68
UBQLN4-202ENST00000459954 TRAV12-3A0A0B4J271 114 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 A0A1B0GV72 72 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 TMEM262E9PQX1 116 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 F5H697 171 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 CRLF1O75462 422 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 APOMO95445 188 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 LY6G6DO95868 133 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 LY6EQ16553 131 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 KRTAP21-3Q3LHN1 58 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 TMEM170BQ5T4T1 132 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 SH2D6Q7Z4S9 175 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 TEN1Q86WV5 123 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 KLHL30-AS1Q8NEE0 82 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 ZNRF2Q8NHG8 242 aa4.53□□□□□ -1.68
UBQLN4-202ENST00000459954 TEP1Q99973 2627 aaKnown RBP4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 IGHV3OR16-10A0A075B7F0 116 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 CYSRT1A8MQ03 144 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 M0R2P5 195 aa4.52□□□□□ -1.69
UBQLN4-202ENST00000459954 RHODO00212 210 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms