RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 TCTEX1D4Q5JR98 221 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 FAM74A4Q5TZK3 123 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 AMTNQ6UX39 209 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 C20orf203Q8NBC4 194 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 RAX2Q96IS3 184 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 DNAJC30Q96LL9 226 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 SPXQ9BT56 116 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 TTTY13Q9BZ97 58 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 VCX2Q9H322 139 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 OTOGQ6ZRI0 2925 aa6.56□□□□□ -1.36
HDAC3-202ENST00000459727 TRAV25A0A0B4J276 109 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 M0R2P5 195 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 LEPROTO15243 131 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 IGHV4-31P0DP07 118 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 UBE2D1P51668 147 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 CMC4P56277 68 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-202ENST00000459727 DEFB1P60022 68 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 SMAGPQ0VAQ4 97 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 SPINK13Q1W4C9 94 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 TMEM95Q3KNT9 176 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 GAGE13Q4V321 117 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 TMEM170BQ5T4T1 132 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 DYNLRB2Q8TF09 96 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 DLX4Q92988 240 aaPredicted RBP6.55□□□□□ -1.36
HDAC3-202ENST00000459727 SPANXA1Q9NS26 97 aa6.55□□□□□ -1.36
HDAC3-202ENST00000459727 MRPL16Q9NX20 251 aaKnown RBP6.55□□□□□ -1.36
HDAC3-202ENST00000459727 SPTBN1Q01082 2364 aaKnown RBP6.54□□□□□ -1.36
HDAC3-202ENST00000459727 A0A0J9YY99 117 aa6.54□□□□□ -1.36
HDAC3-202ENST00000459727 TMEM238C9JI98 176 aa6.54□□□□□ -1.36
HDAC3-202ENST00000459727 J3QQQ9 107 aa6.54□□□□□ -1.36
HDAC3-202ENST00000459727 K7ERJ3 54 aa6.54□□□□□ -1.36
HDAC3-202ENST00000459727 DEFB113Q30KQ7 82 aa6.54□□□□□ -1.36
HDAC3-202ENST00000459727 CD300EQ496F6 205 aaPredicted RBP6.54□□□□□ -1.36
HDAC3-202ENST00000459727 CRYBG3Q68DQ2 2970 aa6.54□□□□□ -1.36
HDAC3-202ENST00000459727 SLC25A29Q8N8R3 303 aa6.54□□□□□ -1.36
HDAC3-202ENST00000459727 ATP6V0E2Q8NHE4 81 aa6.54□□□□□ -1.36
HDAC3-202ENST00000459727 TNFRSF18Q9Y5U5 241 aa6.54□□□□□ -1.36
HDAC3-202ENST00000459727 POLQO75417 2590 aa6.54□□□□□ -1.36
HDAC3-202ENST00000459727 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.53□□□□□ -1.36
HDAC3-202ENST00000459727 H3BMM0 161 aa6.53□□□□□ -1.36
HDAC3-202ENST00000459727 TSHBP01222 138 aa6.53□□□□□ -1.36
HDAC3-202ENST00000459727 INSP01308 110 aa6.53□□□□□ -1.36
HDAC3-202ENST00000459727 SCGB1A1P11684 91 aa6.53□□□□□ -1.36
HDAC3-202ENST00000459727 RPL24P83731 157 aaKnown RBP6.53□□□□□ -1.36
HDAC3-202ENST00000459727 DUX3Q96PT4 197 aa6.53□□□□□ -1.36
HDAC3-202ENST00000459727 NAA38Q9BRA0 125 aaKnown RBP6.53□□□□□ -1.36
HDAC3-202ENST00000459727 CELSR1Q9NYQ6 3014 aa6.52□□□□□ -1.36
HDAC3-202ENST00000459727 NBASA2RRP1 2371 aa6.52□□□□□ -1.37
HDAC3-202ENST00000459727 TRAV12-2A0A075B6T6 113 aa6.52□□□□□ -1.37
HDAC3-202ENST00000459727 TMEM223A0PJW6 202 aa6.52□□□□□ -1.37
HDAC3-202ENST00000459727 IGKV3-20P01619 116 aa6.52□□□□□ -1.37
HDAC3-202ENST00000459727 DEFB131AP59861 70 aa6.52□□□□□ -1.37
HDAC3-202ENST00000459727 JPT2Q9H910 190 aa6.52□□□□□ -1.37
HDAC3-202ENST00000459727 PGPEP1Q9NXJ5 209 aa6.52□□□□□ -1.37
HDAC3-202ENST00000459727 IGLV4-3A0A075B6K6 122 aa6.51□□□□□ -1.37
HDAC3-202ENST00000459727 A0A0B4J2C4 111 aa6.51□□□□□ -1.37
HDAC3-202ENST00000459727 H3BMG7 143 aa6.51□□□□□ -1.37
HDAC3-202ENST00000459727 M0QXV9 152 aa6.51□□□□□ -1.37
HDAC3-202ENST00000459727 SPRY2O43597 315 aa6.51□□□□□ -1.37
HDAC3-202ENST00000459727 SAP30O75446 220 aa6.51□□□□□ -1.37
HDAC3-202ENST00000459727 CD28P10747 220 aa6.51□□□□□ -1.37
HDAC3-202ENST00000459727 RPL39P62891 51 aaKnown RBP6.51□□□□□ -1.37
HDAC3-202ENST00000459727 MRPS36P82909 103 aaKnown RBP6.51□□□□□ -1.37
HDAC3-202ENST00000459727 MORN3Q6PF18 240 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-202ENST00000459727 AMELXQ99217 191 aa6.51□□□□□ -1.37
HDAC3-202ENST00000459727 HIVEP3Q5T1R4 2406 aa6.51□□□□□ -1.37
HDAC3-202ENST00000459727 PDZD2O15018 2839 aa6.51□□□□□ -1.37
HDAC3-202ENST00000459727 FBN3Q75N90 2809 aa6.51□□□□□ -1.37
HDAC3-202ENST00000459727 ADGRG4Q8IZF6 3080 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 WNK2Q9Y3S1 2297 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 CIDEAO60543 219 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 IGHV3-30P01768 117 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 IGHV3-30-5P0DP03 117 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 EDN2P20800 178 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 UBE2D3P61077 147 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 UBE2D2P62837 147 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 BEAN1Q3B7T3 259 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 NDUFA11Q86Y39 141 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 C10orf126Q8N4M7 172 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 ZNRF2Q8NHG8 242 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 COPS9Q8WXC6 57 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 RNF183Q96D59 192 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 TIMM21Q9BVV7 248 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 PRO1854Q9UHT4 67 aa6.5□□□□□ -1.37
HDAC3-202ENST00000459727 TEX48A0A1B0GUV7 120 aa6.49□□□□□ -1.37
HDAC3-202ENST00000459727 TINCRA0A1B0GVN0 87 aa6.49□□□□□ -1.37
HDAC3-202ENST00000459727 TIMM17BO60830 172 aa6.49□□□□□ -1.37
HDAC3-202ENST00000459727 TSPAN13O95857 204 aa6.49□□□□□ -1.37
HDAC3-202ENST00000459727 IGHV3-53P01767 116 aa6.49□□□□□ -1.37
HDAC3-202ENST00000459727 ZNF22P17026 224 aaPredicted RBP6.49□□□□□ -1.37
HDAC3-202ENST00000459727 C10orf99Q6UWK7 81 aa6.49□□□□□ -1.37
HDAC3-202ENST00000459727 C1QTNF4Q9BXJ3 329 aa6.49□□□□□ -1.37
HDAC3-202ENST00000459727 MAP6D1Q9H9H5 199 aa6.49□□□□□ -1.37
HDAC3-202ENST00000459727 YAE1D1Q9NRH1 226 aa6.49□□□□□ -1.37
HDAC3-202ENST00000459727 ABCA2Q9BZC7 2435 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 TRBV10-1A0A0K0K1A3 114 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 KNCNA6PVL3 124 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 RS1O15537 224 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 P0DMU3 169 aa6.48□□□□□ -1.37
HDAC3-202ENST00000459727 FAM231AP0DMU4 169 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms