RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 DAZ4Q86SG3 579 aaKnown RBP10.96□□□□□ -0.65
CD28-203ENST00000458610 NEXN-AS1Q8NBZ9 246 aa10.96□□□□□ -0.65
CD28-203ENST00000458610 DAZ3Q9NR90 486 aaKnown RBP10.96□□□□□ -0.65
CD28-203ENST00000458610 URGCP-MRPS24S4R325 110 aa10.96□□□□□ -0.65
CD28-203ENST00000458610 TSKUQ8WUA8 353 aa10.95□□□□□ -0.66
CD28-203ENST00000458610 GTSF1Q8WW33 167 aa10.95□□□□□ -0.66
CD28-203ENST00000458610 IBA57-AS1B1ANH7 110 aa10.94□□□□□ -0.66
CD28-203ENST00000458610 M0QY20 66 aa10.94□□□□□ -0.66
CD28-203ENST00000458610 EREGO14944 169 aa10.94□□□□□ -0.66
CD28-203ENST00000458610 ISOC2Q96AB3 205 aa10.94□□□□□ -0.66
CD28-203ENST00000458610 PGLYRP4Q96LB8 373 aa10.94□□□□□ -0.66
CD28-203ENST00000458610 C9JQL5 133 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 IGHV3-30P01768 117 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 IGHV3-33P01772 117 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 IGHV3-30-3P0DP02 117 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 IGHV3-30-5P0DP03 117 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 PKIAP61925 76 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 RPL23P62829 140 aaKnown RBP10.93□□□□□ -0.66
CD28-203ENST00000458610 SRSF3P84103 164 aaKnown RBP10.93□□□□□ -0.66
CD28-203ENST00000458610 ELOBQ15370 118 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 ADIRFQ15847 76 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 CLLU1Q5K131 121 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 SUMO4Q6EEV6 95 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 RASL11AQ6T310 242 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 FRZBQ92765 325 aa10.93□□□□□ -0.66
CD28-203ENST00000458610 TRBV6-8A0A0A6YYG3 113 aa10.92□□□□□ -0.66
CD28-203ENST00000458610 LAGE3Q14657 143 aa10.92□□□□□ -0.66
CD28-203ENST00000458610 CHCHD7Q9BUK0 85 aa10.92□□□□□ -0.66
CD28-203ENST00000458610 NIT2Q9NQR4 276 aa10.92□□□□□ -0.66
CD28-203ENST00000458610 A0A087WX48 190 aa10.91□□□□□ -0.66
CD28-203ENST00000458610 A0A1B0GUT8 65 aa10.91□□□□□ -0.66
CD28-203ENST00000458610 LINC00862A6NCI5 91 aa10.91□□□□□ -0.66
CD28-203ENST00000458610 HIGD1CA8MV81 97 aa10.91□□□□□ -0.66
CD28-203ENST00000458610 Q6ZRN7 208 aaPredicted RBP10.91□□□□□ -0.66
CD28-203ENST00000458610 SLC7A5P1Q8MH63 180 aa10.91□□□□□ -0.66
CD28-203ENST00000458610 TRAV8-3A0A0A6YYJ7 113 aa10.9□□□□□ -0.66
CD28-203ENST00000458610 RIGQ13278 110 aa10.9□□□□□ -0.66
CD28-203ENST00000458610 NIT1Q86X76 327 aa10.9□□□□□ -0.66
CD28-203ENST00000458610 TM2D2Q9BX73 214 aa10.9□□□□□ -0.66
CD28-203ENST00000458610 V9GYV3 84 aa10.9□□□□□ -0.66
CD28-203ENST00000458610 TMEM262E9PQX1 116 aa10.89□□□□□ -0.67
CD28-203ENST00000458610 PSCAO43653 123 aa10.89□□□□□ -0.67
CD28-203ENST00000458610 NAT8BQ9UHF3 227 aa10.89□□□□□ -0.67
CD28-203ENST00000458610 RMI2Q96E14 147 aa10.88□□□□□ -0.67
CD28-203ENST00000458610 CHCHD5Q9BSY4 110 aa10.88□□□□□ -0.67
CD28-203ENST00000458610 COX11Q9Y6N1 276 aa10.88□□□□□ -0.67
CD28-203ENST00000458610 EPPK1P58107 5090 aaKnown RBP10.88□□□□□ -0.67
CD28-203ENST00000458610 DNAH10Q8IVF4 4471 aa10.88□□□□□ -0.67
CD28-203ENST00000458610 TRBV25-1A0A075B6N4 114 aa10.87□□□□□ -0.67
CD28-203ENST00000458610 TMEM191AQ9H0A3 160 aa10.87□□□□□ -0.67
CD28-203ENST00000458610 Q9HAA7 133 aa10.87□□□□□ -0.67
CD28-203ENST00000458610 IGHV1-24A0A0C4DH33 117 aa10.86□□□□□ -0.67
CD28-203ENST00000458610 PPP1R2P9O14990 202 aa10.86□□□□□ -0.67
CD28-203ENST00000458610 PNRC1Q12796 327 aaPredicted RBP10.86□□□□□ -0.67
CD28-203ENST00000458610 NUP35Q8NFH5 326 aa10.86□□□□□ -0.67
CD28-203ENST00000458610 PGPEP1Q9NXJ5 209 aa10.86□□□□□ -0.67
CD28-203ENST00000458610 SMIM27A0A1W2PRY6 76 aa10.85□□□□□ -0.67
CD28-203ENST00000458610 Q0VG73 95 aa10.85□□□□□ -0.67
CD28-203ENST00000458610 IQCJQ1A5X6 159 aa10.85□□□□□ -0.67
CD28-203ENST00000458610 SPATA12Q7Z6I5 190 aa10.85□□□□□ -0.67
CD28-203ENST00000458610 GATD1Q8NB37 220 aa10.85□□□□□ -0.67
CD28-203ENST00000458610 BIRC6Q9NR09 4857 aa10.85□□□□□ -0.67
CD28-203ENST00000458610 A0A1B0GW15 77 aa10.84□□□□□ -0.67
CD28-203ENST00000458610 C16orf90A8MZG2 172 aa10.84□□□□□ -0.67
CD28-203ENST00000458610 COTL1Q14019 142 aa10.84□□□□□ -0.67
CD28-203ENST00000458610 NTM-AS1Q6ZSK4 140 aa10.84□□□□□ -0.67
CD28-203ENST00000458610 KLK12Q9UKR0 248 aa10.84□□□□□ -0.67
CD28-203ENST00000458610 A0A087WTM6 91 aa10.83□□□□□ -0.68
CD28-203ENST00000458610 S100A8P05109 93 aa10.83□□□□□ -0.68
CD28-203ENST00000458610 UQCC3Q6UW78 93 aa10.83□□□□□ -0.68
CD28-203ENST00000458610 MRAP2Q96G30 205 aa10.83□□□□□ -0.68
CD28-203ENST00000458610 TRAV26-2A0A0B4J265 109 aa10.82□□□□□ -0.68
CD28-203ENST00000458610 PPP1R17O96001 155 aa10.82□□□□□ -0.68
CD28-203ENST00000458610 Q8N3U1 123 aa10.82□□□□□ -0.68
CD28-203ENST00000458610 UBE2WQ96B02 151 aa10.82□□□□□ -0.68
CD28-203ENST00000458610 TMEM243Q9BU79 118 aa10.82□□□□□ -0.68
CD28-203ENST00000458610 NCR2O95944 276 aa10.81□□□□□ -0.68
CD28-203ENST00000458610 CRPP02741 224 aa10.81□□□□□ -0.68
CD28-203ENST00000458610 MT-ND4LP03901 98 aa10.81□□□□□ -0.68
CD28-203ENST00000458610 RAB4AP20338 218 aa10.81□□□□□ -0.68
CD28-203ENST00000458610 CDPF1Q6NVV7 123 aa10.81□□□□□ -0.68
CD28-203ENST00000458610 ATRAIDQ6UW56 229 aa10.81□□□□□ -0.68
CD28-203ENST00000458610 TRBV6-5A0A0K0K1A5 114 aa10.8□□□□□ -0.68
CD28-203ENST00000458610 UBE2L6O14933 153 aa10.8□□□□□ -0.68
CD28-203ENST00000458610 ANGP03950 147 aaKnown RBP10.8□□□□□ -0.68
CD28-203ENST00000458610 AMTP48728 403 aa10.8□□□□□ -0.68
CD28-203ENST00000458610 GAGE6Q13070 117 aa10.8□□□□□ -0.68
CD28-203ENST00000458610 ANAPC16Q96DE5 110 aa10.8□□□□□ -0.68
CD28-203ENST00000458610 ST20Q9HBF5 79 aa10.8□□□□□ -0.68
CD28-203ENST00000458610 SDHAF1A6NFY7 115 aa10.79□□□□□ -0.68
CD28-203ENST00000458610 PMCHP20382 165 aa10.79□□□□□ -0.68
CD28-203ENST00000458610 MPV17L2Q567V2 206 aa10.79□□□□□ -0.68
CD28-203ENST00000458610 COMMD7Q86VX2 200 aa10.79□□□□□ -0.68
CD28-203ENST00000458610 RPL39LQ96EH5 51 aaKnown RBP10.79□□□□□ -0.68
CD28-203ENST00000458610 IGKV2D-24A0A075B6R9 120 aa10.78□□□□□ -0.68
CD28-203ENST00000458610 A0A1B0GUV1 79 aa10.78□□□□□ -0.68
CD28-203ENST00000458610 F8W036 122 aa10.78□□□□□ -0.68
CD28-203ENST00000458610 I3L3M4 83 aa10.78□□□□□ -0.68
CD28-203ENST00000458610 CAMPP49913 170 aa10.78□□□□□ -0.68
CD28-203ENST00000458610 RBX1P62877 108 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms