RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 SLURP1P55000 103 aa15.2■□□□□ 0.02
CRAT-207ENST00000458362 RHOHQ15669 191 aa15.2■□□□□ 0.02
CRAT-207ENST00000458362 RNF152Q8N8N0 203 aa15.2■□□□□ 0.02
CRAT-207ENST00000458362 PGPEP1Q9NXJ5 209 aa15.2■□□□□ 0.02
CRAT-207ENST00000458362 MXRA5Q9NR99 2828 aa15.2■□□□□ 0.02
CRAT-207ENST00000458362 PRB1P04280 392 aa15.19■□□□□ 0.02
CRAT-207ENST00000458362 IGHV4-31P0DP07 118 aa15.19■□□□□ 0.02
CRAT-207ENST00000458362 UBE2D1P51668 147 aa15.19■□□□□ 0.02
CRAT-207ENST00000458362 COTL1Q14019 142 aa15.19■□□□□ 0.02
CRAT-207ENST00000458362 MTURNQ8N3F0 131 aa15.19■□□□□ 0.02
CRAT-207ENST00000458362 PTPN13Q12923 2485 aa15.19■□□□□ 0.02
CRAT-207ENST00000458362 F8W1H4 67 aa15.19■□□□□ 0.02
CRAT-207ENST00000458362 SPANXB1Q9NS25 103 aaPredicted RBP15.19■□□□□ 0.02
CRAT-207ENST00000458362 ZNF462Q96JM2 2506 aa15.18■□□□□ 0.02
CRAT-207ENST00000458362 AMELXQ99217 191 aa15.18■□□□□ 0.02
CRAT-207ENST00000458362 TRGV11A0A075B6L2 103 aa15.18■□□□□ 0.02
CRAT-207ENST00000458362 PRO0461Q9UI25 63 aa15.18■□□□□ 0.02
CRAT-207ENST00000458362 PRM2P04554 102 aa15.17■□□□□ 0.02
CRAT-207ENST00000458362 C20orf203Q8NBC4 194 aa15.17■□□□□ 0.02
CRAT-207ENST00000458362 HTN1P15515 57 aa15.17■□□□□ 0.02
CRAT-207ENST00000458362 MRPL16Q9NX20 251 aaKnown RBP15.17■□□□□ 0.02
CRAT-207ENST00000458362 USP24Q9UPU5 2620 aa15.17■□□□□ 0.02
CRAT-207ENST00000458362 TMEM238LA0A1B0GVL6 79 aa15.16■□□□□ 0.02
CRAT-207ENST00000458362 RBMY1BA6NDE4 496 aaKnown RBP15.16■□□□□ 0.02
CRAT-207ENST00000458362 RBMY1EA6NEQ0 496 aaKnown RBP15.16■□□□□ 0.02
CRAT-207ENST00000458362 A6NJY4 79 aa15.16■□□□□ 0.02
CRAT-207ENST00000458362 RBMY1DP0C7P1 496 aaKnown RBP15.16■□□□□ 0.02
CRAT-207ENST00000458362 DEFB131AP59861 70 aa15.16■□□□□ 0.02
CRAT-207ENST00000458362 NFE4Q86UQ8 179 aa15.16■□□□□ 0.02
CRAT-207ENST00000458362 IGHV3-73A0A0B4J1V6 119 aa15.15■□□□□ 0.02
CRAT-207ENST00000458362 I3L3M4 83 aa15.15■□□□□ 0.02
CRAT-207ENST00000458362 PROK1P58294 105 aa15.15■□□□□ 0.02
CRAT-207ENST00000458362 SH2D6Q7Z4S9 175 aa15.15■□□□□ 0.02
CRAT-207ENST00000458362 KRTAP10-9P60411 292 aa15.15■□□□□ 0.02
CRAT-207ENST00000458362 J3QQQ9 107 aa15.14■□□□□ 0.01
CRAT-207ENST00000458362 TSPAN13O95857 204 aa15.14■□□□□ 0.01
CRAT-207ENST00000458362 GAGE13Q4V321 117 aa15.14■□□□□ 0.01
CRAT-207ENST00000458362 DUX3Q96PT4 197 aa15.14■□□□□ 0.01
CRAT-207ENST00000458362 APOMO95445 188 aa15.13■□□□□ 0.01
CRAT-207ENST00000458362 SFTA2Q6UW10 78 aa15.13■□□□□ 0.01
CRAT-207ENST00000458362 PRRC2AP48634 2157 aaKnown RBP15.13■□□□□ 0.01
CRAT-207ENST00000458362 IGLV4-3A0A075B6K6 122 aa15.13■□□□□ 0.01
CRAT-207ENST00000458362 TMEM223A0PJW6 202 aa15.13■□□□□ 0.01
CRAT-207ENST00000458362 IGHV3-30P01768 117 aa15.13■□□□□ 0.01
CRAT-207ENST00000458362 IGHV3-30-5P0DP03 117 aa15.13■□□□□ 0.01
CRAT-207ENST00000458362 ETDBQ3ZM63 59 aa15.13■□□□□ 0.01
CRAT-207ENST00000458362 SLC25A29Q8N8R3 303 aa15.13■□□□□ 0.01
CRAT-207ENST00000458362 H3BMM0 161 aa15.12■□□□□ 0.01
CRAT-207ENST00000458362 HIST2H2BDQ6DRA6 164 aa15.12■□□□□ 0.01
CRAT-207ENST00000458362 UBR5O95071 2799 aaPredicted RBP15.12■□□□□ 0.01
CRAT-207ENST00000458362 A8MTW9 85 aa15.12■□□□□ 0.01
CRAT-207ENST00000458362 NACAE9PAV3 2078 aa15.11■□□□□ 0.01
CRAT-207ENST00000458362 NAV2Q8IVL1 2488 aa15.11■□□□□ 0.01
CRAT-207ENST00000458362 A0A0J9YXV3 536 aa15.11■□□□□ 0.01
CRAT-207ENST00000458362 ZNF22P17026 224 aaPredicted RBP15.11■□□□□ 0.01
CRAT-207ENST00000458362 LGALS3P17931 250 aaKnown RBP15.11■□□□□ 0.01
CRAT-207ENST00000458362 NDUFA11Q86Y39 141 aa15.11■□□□□ 0.01
CRAT-207ENST00000458362 TMEM61Q8N0U2 210 aa15.1■□□□□ 0.01
CRAT-207ENST00000458362 FAM104AQ969W3 186 aa15.1■□□□□ 0.01
CRAT-207ENST00000458362 Q9UF83 564 aa15.1■□□□□ 0.01
CRAT-207ENST00000458362 IGHV3-64A0A075B6Q5 118 aa15.1■□□□□ 0.01
CRAT-207ENST00000458362 LEPROTO15243 131 aa15.1■□□□□ 0.01
CRAT-207ENST00000458362 TEX15Q9BXT5 2789 aa15.09■□□□□ 0.01
CRAT-207ENST00000458362 ABCA12Q86UK0 2595 aa15.09■□□□□ 0.01
CRAT-207ENST00000458362 RHODO00212 210 aa15.09■□□□□ 0.01
CRAT-207ENST00000458362 CFC1BP0CG36 223 aa15.09■□□□□ 0.01
CRAT-207ENST00000458362 CFC1P0CG37 223 aa15.09■□□□□ 0.01
CRAT-207ENST00000458362 Q6ZSN1 163 aa15.09■□□□□ 0.01
CRAT-207ENST00000458362 MYO9AB2RTY4 2548 aa15.09■□□□□ 0.01
CRAT-207ENST00000458362 Q8N2B8 174 aa15.08■□□□□ 0
CRAT-207ENST00000458362 VCX2Q9H322 139 aa15.08■□□□□ 0
CRAT-207ENST00000458362 EDA2RQ9HAV5 297 aa15.08■□□□□ 0
CRAT-207ENST00000458362 LOC107984156A0A0G2JMH3 177 aa15.08■□□□□ 0
CRAT-207ENST00000458362 Q5PR19 223 aa15.08■□□□□ 0
CRAT-207ENST00000458362 ARL17AQ8IVW1 177 aa15.08■□□□□ 0
CRAT-207ENST00000458362 BBC3Q96PG8 261 aaPredicted RBP15.08■□□□□ 0
CRAT-207ENST00000458362 SPAG8Q99932 426 aaPredicted RBP15.08■□□□□ 0
CRAT-207ENST00000458362 UBE2D3P61077 147 aa15.07■□□□□ 0
CRAT-207ENST00000458362 UBE2D2P62837 147 aa15.07■□□□□ 0
CRAT-207ENST00000458362 PSMB2P49721 201 aa15.06■□□□□ 0
CRAT-207ENST00000458362 SMCPP49901 116 aaPredicted RBP15.06■□□□□ 0
CRAT-207ENST00000458362 CEMP1Q6PRD7 247 aaPredicted RBP15.06■□□□□ 0
CRAT-207ENST00000458362 DLX4Q92988 240 aaPredicted RBP15.06■□□□□ 0
CRAT-207ENST00000458362 CD28P10747 220 aa15.06■□□□□ 0
CRAT-207ENST00000458362 INSL3P51460 131 aa15.06■□□□□ 0
CRAT-207ENST00000458362 M0R2P5 195 aa15.05■□□□□ 0
CRAT-207ENST00000458362 MAP6D1Q9H9H5 199 aa15.05■□□□□ 0
CRAT-207ENST00000458362 TSSC4Q9Y5U2 329 aaPredicted RBP15.05■□□□□ 0
CRAT-207ENST00000458362 CFAP126Q5VTH2 177 aa15.05■□□□□ -0
CRAT-207ENST00000458362 EIF4EBP3O60516 100 aaPredicted RBP15.04■□□□□ -0
CRAT-207ENST00000458362 KHDC1LQ5JSQ8 128 aa15.04■□□□□ -0
CRAT-207ENST00000458362 TRAV2A0A0B4J234 112 aa15.04■□□□□ -0
CRAT-207ENST00000458362 RNASE13Q5GAN3 156 aaKnown RBP15.04■□□□□ -0
CRAT-207ENST00000458362 C4orf3Q8WVX3 66 aa15.04■□□□□ -0
CRAT-207ENST00000458362 PYGO1Q9Y3Y4 419 aa15.04■□□□□ -0
CRAT-207ENST00000458362 TNFRSF18Q9Y5U5 241 aa15.04■□□□□ -0
CRAT-207ENST00000458362 A8MWV9 139 aa15.03■□□□□ -0
CRAT-207ENST00000458362 PEMTQ9UBM1 199 aa15.03■□□□□ -0
CRAT-207ENST00000458362 ZNF415Q09FC8 603 aa15.03■□□□□ -0
CRAT-207ENST00000458362 DEFB113Q30KQ7 82 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms