RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 IGKV6-21A0A0C4DH24 114 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 A0A1W2PS18 150 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 A6NN06 94 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 E7EQL1 145 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 PIRTP0C851 137 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 CHTF8P0CG12 524 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 NOVP48745 357 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 EFNA4P52798 201 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 CRIP2P52943 208 aaPredicted RBP3.86□□□□□ -1.79
VPS41-209ENST00000457055 DSCR9P59020 149 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 RHOHQ15669 191 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 CEMP1Q6PRD7 247 aaPredicted RBP3.86□□□□□ -1.79
VPS41-209ENST00000457055 PATE2Q6UY27 113 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 CYP2G1PQ6ZSU1 146 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 PPP1R1CQ8WVI7 109 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 SLC50A1Q9BRV3 221 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 MRPL35Q9NZE8 188 aaKnown RBP3.86□□□□□ -1.79
VPS41-209ENST00000457055 TP53TG3Q9ULZ0 132 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 CELA1Q9UNI1 258 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 NUMA1Q14980 2115 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 OTOGQ6ZRI0 2925 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 OBSL1O75147 1896 aa3.86□□□□□ -1.79
VPS41-209ENST00000457055 PDZD2O15018 2839 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 DOCK7Q96N67 2140 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 KRTAP16-1A8MUX0 517 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 C3orf84H3BNL1 204 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 BCE1O60756 84 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 PRH1P02810 166 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 SLC25A16P16260 332 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 DSCR4P56555 118 aaPredicted RBP3.85□□□□□ -1.79
VPS41-209ENST00000457055 Q1T7F1 81 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 ASB16-AS1Q495Z4 193 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 S100A7L2Q5SY68 101 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 C9orf57Q5W0N0 161 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 SCGB3A1Q96QR1 104 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 NMES1Q9C002 83 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 DYNLRB1Q9NP97 96 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 GNG13Q9P2W3 67 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 ARHGAP21Q5T5U3 1957 aa3.85□□□□□ -1.79
VPS41-209ENST00000457055 TLN1Q9Y490 2541 aaKnown RBP3.84□□□□□ -1.79
VPS41-209ENST00000457055 NYNRINQ9P2P1 1898 aaKnown RBP3.84□□□□□ -1.79
VPS41-209ENST00000457055 NIPBLQ6KC79 2804 aaeCLIP3.84□□□□□ -1.79
VPS41-209ENST00000457055 IGHV3OR15-7A0A075B7D8 119 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 A0A087WYN8 130 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 A0A087X002 238 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 TRAV3A0A0B4J244 114 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 INAFM1C9JVW0 142 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 FAM72CH0Y354 149 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 IL4P05112 153 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 GCHFRP30047 84 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 PEBP1P30086 187 aaKnown RBP3.84□□□□□ -1.79
VPS41-209ENST00000457055 RPL27AP46776 148 aaKnown RBP3.84□□□□□ -1.79
VPS41-209ENST00000457055 ESPL1Q14674 2120 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 FAM72DQ6L9T8 149 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 REG3GQ6UW15 175 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 IGFL3Q6UXB1 125 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 CSNK1G2-AS1Q8NCQ2 148 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 CHCHD1Q96BP2 118 aaKnown RBP3.84□□□□□ -1.79
VPS41-209ENST00000457055 NABP2Q9BQ15 211 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 XAGE1AQ9HD64 81 aa3.84□□□□□ -1.79
VPS41-209ENST00000457055 IGHV3-74A0A0B4J1X5 117 aa3.83□□□□□ -1.8
VPS41-209ENST00000457055 TCRBV4S1A1TA0A5B7 111 aa3.83□□□□□ -1.8
VPS41-209ENST00000457055 DYNLT1P63172 113 aa3.83□□□□□ -1.8
VPS41-209ENST00000457055 DEFB121Q5J5C9 76 aa3.83□□□□□ -1.8
VPS41-209ENST00000457055 SPANXN1Q5VSR9 72 aa3.83□□□□□ -1.8
VPS41-209ENST00000457055 SLC48A1Q6P1K1 146 aa3.83□□□□□ -1.8
VPS41-209ENST00000457055 Q6P435 159 aa3.83□□□□□ -1.8
VPS41-209ENST00000457055 ZNF497Q6ZNH5 498 aa3.83□□□□□ -1.8
VPS41-209ENST00000457055 C16orf47Q6ZP98 133 aaPredicted RBP3.83□□□□□ -1.8
VPS41-209ENST00000457055 CCL4L1Q8NHW4 92 aa3.83□□□□□ -1.8
VPS41-209ENST00000457055 FAM104AQ969W3 186 aa3.83□□□□□ -1.8
VPS41-209ENST00000457055 ATXN7L3BQ96GX2 97 aa3.83□□□□□ -1.8
VPS41-209ENST00000457055 MTORP42345 2549 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 TANC2Q9HCD6 1990 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 TRAV13-2A0A0B4J235 113 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 C2orf70A6NJV1 201 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 H3BMM0 161 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 CPSF4O95639 269 aaKnown RBP3.82□□□□□ -1.8
VPS41-209ENST00000457055 SSBP1Q04837 148 aaKnown RBP3.82□□□□□ -1.8
VPS41-209ENST00000457055 ESRGQ1W209 222 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 DYNLRB2Q8TF09 96 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 UBE2WQ96B02 151 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 CYSTM1Q9H1C7 97 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 LINC00597Q9H2U6 94 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 ABRACLQ9P1F3 81 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 LINC00474Q9P2X8 69 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 AKAP9Q99996 3911 aa3.82□□□□□ -1.8
VPS41-209ENST00000457055 APCP25054 2843 aa3.81□□□□□ -1.8
VPS41-209ENST00000457055 IGHV4-4A0A075B6R2 117 aa3.81□□□□□ -1.8
VPS41-209ENST00000457055 IGHV3OR16-10A0A075B7F0 116 aa3.81□□□□□ -1.8
VPS41-209ENST00000457055 HCRTO43612 131 aa3.81□□□□□ -1.8
VPS41-209ENST00000457055 NPYP01303 97 aa3.81□□□□□ -1.8
VPS41-209ENST00000457055 IGKV1-39P01597 117 aa3.81□□□□□ -1.8
VPS41-209ENST00000457055 IGKV1D-39P04432 117 aa3.81□□□□□ -1.8
VPS41-209ENST00000457055 KISS1Q15726 138 aa3.81□□□□□ -1.8
VPS41-209ENST00000457055 MRPL51Q4U2R6 128 aaKnown RBP3.81□□□□□ -1.8
VPS41-209ENST00000457055 ORMDL3Q8N138 153 aa3.81□□□□□ -1.8
VPS41-209ENST00000457055 NHP2Q9NX24 153 aaKnown RBP3.81□□□□□ -1.8
VPS41-209ENST00000457055 KIAA2026Q5HYC2 2103 aa3.8□□□□□ -1.8
VPS41-209ENST00000457055 ANKHD1Q8IWZ3 2542 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms