RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 KRTAP17-1Q9BYP8 105 aa10.83□□□□□ -0.68
CPSF6-203ENST00000456847 RPP21Q9H633 154 aaKnown RBP10.83□□□□□ -0.68
CPSF6-203ENST00000456847 TMEM262E9PQX1 116 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 TMEM250H0YL14 139 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 TRGC1P0CF51 173 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 OCC1Q8TAD7 63 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 RMI2Q96E14 147 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 RNASE7Q9H1E1 156 aaKnown RBP10.82□□□□□ -0.68
CPSF6-203ENST00000456847 KLK12Q9UKR0 248 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 IGLV5-52A0A0A0MRZ9 124 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 TRBV6-8A0A0A6YYG3 113 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 H7C1H1 209 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 K7EN84 100 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 ELOBQ15370 118 aa10.82□□□□□ -0.68
CPSF6-203ENST00000456847 DNAH5Q8TE73 4624 aa10.81□□□□□ -0.68
CPSF6-203ENST00000456847 Q8N814 137 aa10.81□□□□□ -0.68
CPSF6-203ENST00000456847 EIF5A2Q9GZV4 153 aaKnown RBP10.81□□□□□ -0.68
CPSF6-203ENST00000456847 HSPG2P98160 4391 aa10.8□□□□□ -0.68
CPSF6-203ENST00000456847 GCSHP23434 173 aa10.8□□□□□ -0.68
CPSF6-203ENST00000456847 TMEM97Q5BJF2 176 aa10.8□□□□□ -0.68
CPSF6-203ENST00000456847 SUMO4Q6EEV6 95 aa10.8□□□□□ -0.68
CPSF6-203ENST00000456847 LYPD6BQ8NI32 183 aa10.8□□□□□ -0.68
CPSF6-203ENST00000456847 NTN5Q8WTR8 489 aaPredicted RBP10.8□□□□□ -0.68
CPSF6-203ENST00000456847 UBE2WQ96B02 151 aa10.8□□□□□ -0.68
CPSF6-203ENST00000456847 CHCHD5Q9BSY4 110 aa10.8□□□□□ -0.68
CPSF6-203ENST00000456847 IGKV2D-24A0A075B6R9 120 aa10.8□□□□□ -0.68
CPSF6-203ENST00000456847 CTRLP40313 264 aa10.8□□□□□ -0.68
CPSF6-203ENST00000456847 DPH3P1Q9H4G8 78 aa10.8□□□□□ -0.68
CPSF6-203ENST00000456847 COX11Q9Y6N1 276 aa10.8□□□□□ -0.68
CPSF6-203ENST00000456847 NTF3P20783 257 aa10.79□□□□□ -0.68
CPSF6-203ENST00000456847 KRTAP10-1P60331 282 aa10.79□□□□□ -0.68
CPSF6-203ENST00000456847 DNAJC30Q96LL9 226 aa10.79□□□□□ -0.68
CPSF6-203ENST00000456847 LECT2O14960 151 aa10.78□□□□□ -0.68
CPSF6-203ENST00000456847 GATCO43716 136 aaKnown RBP10.78□□□□□ -0.68
CPSF6-203ENST00000456847 PKIAP61925 76 aa10.78□□□□□ -0.68
CPSF6-203ENST00000456847 TWIST1Q15672 202 aa10.78□□□□□ -0.68
CPSF6-203ENST00000456847 APOBP04114 4563 aaKnown RBP10.78□□□□□ -0.68
CPSF6-203ENST00000456847 M0QY20 66 aa10.78□□□□□ -0.68
CPSF6-203ENST00000456847 CRPP02741 224 aa10.78□□□□□ -0.68
CPSF6-203ENST00000456847 KRTAP4-5Q9BYR2 181 aa10.78□□□□□ -0.68
CPSF6-203ENST00000456847 MPV17L2Q567V2 206 aa10.77□□□□□ -0.69
CPSF6-203ENST00000456847 WDR73Q6P4I2 378 aa10.77□□□□□ -0.69
CPSF6-203ENST00000456847 RASL11AQ6T310 242 aa10.77□□□□□ -0.69
CPSF6-203ENST00000456847 Q8N1X5 172 aa10.77□□□□□ -0.69
CPSF6-203ENST00000456847 C15orf54Q8N8G6 183 aa10.77□□□□□ -0.69
CPSF6-203ENST00000456847 SMIM7Q9BQ49 75 aa10.77□□□□□ -0.69
CPSF6-203ENST00000456847 TRBV25-1A0A075B6N4 114 aa10.76□□□□□ -0.69
CPSF6-203ENST00000456847 ANGP03950 147 aaKnown RBP10.76□□□□□ -0.69
CPSF6-203ENST00000456847 Q0VG73 95 aa10.76□□□□□ -0.69
CPSF6-203ENST00000456847 WFDC2Q14508 124 aa10.76□□□□□ -0.69
CPSF6-203ENST00000456847 FAM210AQ96ND0 272 aa10.76□□□□□ -0.69
CPSF6-203ENST00000456847 NTM-AS1Q6ZSK4 140 aa10.76□□□□□ -0.69
CPSF6-203ENST00000456847 BAALCQ8WXS3 180 aa10.76□□□□□ -0.69
CPSF6-203ENST00000456847 GAGE6Q13070 117 aa10.75□□□□□ -0.69
CPSF6-203ENST00000456847 SMIM15Q7Z3B0 74 aa10.75□□□□□ -0.69
CPSF6-203ENST00000456847 IGHV1-24A0A0C4DH33 117 aa10.74□□□□□ -0.69
CPSF6-203ENST00000456847 FAM231DQ6ZW35 169 aa10.74□□□□□ -0.69
CPSF6-203ENST00000456847 C1orf43Q9BWL3 253 aa10.74□□□□□ -0.69
CPSF6-203ENST00000456847 CNFNQ9BYD5 112 aa10.74□□□□□ -0.69
CPSF6-203ENST00000456847 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.74□□□□□ -0.69
CPSF6-203ENST00000456847 ZNF727A8MUV8 499 aa10.74□□□□□ -0.69
CPSF6-203ENST00000456847 A8MWL6 223 aa10.74□□□□□ -0.69
CPSF6-203ENST00000456847 ATRAIDQ6UW56 229 aa10.74□□□□□ -0.69
CPSF6-203ENST00000456847 Q8N976 141 aa10.74□□□□□ -0.69
CPSF6-203ENST00000456847 GTSF1Q8WW33 167 aa10.74□□□□□ -0.69
CPSF6-203ENST00000456847 NIT2Q9NQR4 276 aa10.74□□□□□ -0.69
CPSF6-203ENST00000456847 NDUFS6O75380 124 aaKnown RBP10.73□□□□□ -0.69
CPSF6-203ENST00000456847 BORCS7Q96B45 105 aa10.73□□□□□ -0.69
CPSF6-203ENST00000456847 PGLYRP4Q96LB8 373 aa10.73□□□□□ -0.69
CPSF6-203ENST00000456847 SRP19P09132 144 aaKnown RBP10.72□□□□□ -0.69
CPSF6-203ENST00000456847 XGP55808 180 aa10.72□□□□□ -0.69
CPSF6-203ENST00000456847 IQCJQ1A5X6 159 aa10.72□□□□□ -0.69
CPSF6-203ENST00000456847 CLPSL2Q6UWE3 100 aa10.72□□□□□ -0.69
CPSF6-203ENST00000456847 RBX1P62877 108 aa10.71□□□□□ -0.69
CPSF6-203ENST00000456847 CT83Q5H943 113 aa10.71□□□□□ -0.69
CPSF6-203ENST00000456847 ENHOQ6UWT2 76 aa10.71□□□□□ -0.69
CPSF6-203ENST00000456847 LINC01551Q86U37 167 aa10.71□□□□□ -0.69
CPSF6-203ENST00000456847 PCLOQ9Y6V0 5065 aa10.71□□□□□ -0.7
CPSF6-203ENST00000456847 TRAV26-2A0A0B4J265 109 aa10.7□□□□□ -0.7
CPSF6-203ENST00000456847 TMEM243Q9BU79 118 aa10.7□□□□□ -0.7
CPSF6-203ENST00000456847 HAMPP81172 84 aa10.7□□□□□ -0.7
CPSF6-203ENST00000456847 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
CPSF6-203ENST00000456847 DEFB104AQ8WTQ1 72 aa10.7□□□□□ -0.7
CPSF6-203ENST00000456847 TMEM70Q9BUB7 260 aa10.7□□□□□ -0.7
CPSF6-203ENST00000456847 EPM2AB3EWF7 344 aa10.69□□□□□ -0.7
CPSF6-203ENST00000456847 UBE2L6O14933 153 aa10.69□□□□□ -0.7
CPSF6-203ENST00000456847 HLA-DQA1P01909 254 aa10.69□□□□□ -0.7
CPSF6-203ENST00000456847 COTL1Q14019 142 aa10.69□□□□□ -0.7
CPSF6-203ENST00000456847 MIAQ16674 131 aa10.69□□□□□ -0.7
CPSF6-203ENST00000456847 AMTP48728 403 aa10.68□□□□□ -0.7
CPSF6-203ENST00000456847 LINC00269Q8N2A0 174 aa10.68□□□□□ -0.7
CPSF6-203ENST00000456847 FRZBQ92765 325 aa10.68□□□□□ -0.7
CPSF6-203ENST00000456847 FOXA3P55318 350 aaPredicted RBP10.68□□□□□ -0.7
CPSF6-203ENST00000456847 TSKUQ8WUA8 353 aa10.68□□□□□ -0.7
CPSF6-203ENST00000456847 OSTCQ9NRP0 149 aa10.68□□□□□ -0.7
CPSF6-203ENST00000456847 C14orf177Q52M58 125 aa10.67□□□□□ -0.7
CPSF6-203ENST00000456847 TEX261Q6UWH6 196 aa10.67□□□□□ -0.7
CPSF6-203ENST00000456847 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
CPSF6-203ENST00000456847 HIGD1CA8MV81 97 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms