RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 GAGE13Q4V321 117 aa11.76□□□□□ -0.53
SNX17-204ENST00000453453 TMEM78Q5T7P6 136 aa11.76□□□□□ -0.53
SNX17-204ENST00000453453 PRO0461Q9UI25 63 aa11.76□□□□□ -0.53
SNX17-204ENST00000453453 TMEM238LA0A1B0GVL6 79 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 A6NJY4 79 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 CMC4P56277 68 aaPredicted RBP11.75□□□□□ -0.53
SNX17-204ENST00000453453 TCTAP57738 103 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 ORMDL2Q53FV1 153 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 MTURNQ8N3F0 131 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 MSRB1Q9NZV6 116 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 LINC01549A6NIU2 74 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.75□□□□□ -0.53
SNX17-204ENST00000453453 PRB4P10163 310 aaPredicted RBP11.75□□□□□ -0.53
SNX17-204ENST00000453453 LYRM7Q5U5X0 104 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 WFDC9Q8NEX5 89 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 HIST1H4GQ99525 98 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 VCX2Q9H322 139 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 LENEPQ9Y5L5 61 aa11.75□□□□□ -0.53
SNX17-204ENST00000453453 MYMXA0A1B0GTQ4 84 aa11.74□□□□□ -0.53
SNX17-204ENST00000453453 OR11H12B2RN74 326 aa11.74□□□□□ -0.53
SNX17-204ENST00000453453 KRTAP21-3Q3LHN1 58 aa11.74□□□□□ -0.53
SNX17-204ENST00000453453 C9orf47Q6ZRZ4 202 aa11.74□□□□□ -0.53
SNX17-204ENST00000453453 OR11H2Q8NH07 326 aa11.74□□□□□ -0.53
SNX17-204ENST00000453453 FBN1P35555 2871 aaKnown RBP11.74□□□□□ -0.53
SNX17-204ENST00000453453 ERCC8Q13216 396 aa11.73□□□□□ -0.53
SNX17-204ENST00000453453 WFDC2Q14508 124 aa11.73□□□□□ -0.53
SNX17-204ENST00000453453 MAPKAPK5-AS1Q8N8E1 139 aa11.73□□□□□ -0.53
SNX17-204ENST00000453453 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
SNX17-204ENST00000453453 C20orf78Q9BR46 151 aa11.73□□□□□ -0.53
SNX17-204ENST00000453453 ZNF256Q9Y2P7 627 aaPredicted RBP11.73□□□□□ -0.53
SNX17-204ENST00000453453 DUSP14O95147 198 aaKnown RBP11.72□□□□□ -0.53
SNX17-204ENST00000453453 DEFB131AP59861 70 aa11.72□□□□□ -0.53
SNX17-204ENST00000453453 SMIM2Q9BVW6 85 aa11.72□□□□□ -0.53
SNX17-204ENST00000453453 TTTY13Q9BZ97 58 aa11.72□□□□□ -0.53
SNX17-204ENST00000453453 AGPAT4-IT1Q9H0P7 198 aa11.72□□□□□ -0.53
SNX17-204ENST00000453453 GTSF1LQ9H1H1 148 aa11.72□□□□□ -0.53
SNX17-204ENST00000453453 MAP6D1Q9H9H5 199 aa11.72□□□□□ -0.53
SNX17-204ENST00000453453 IGKV3D-20A0A0C4DH25 116 aa11.71□□□□□ -0.53
SNX17-204ENST00000453453 M0R381 172 aa11.71□□□□□ -0.53
SNX17-204ENST00000453453 GAS8-AS1O95177 125 aa11.71□□□□□ -0.53
SNX17-204ENST00000453453 MED14OSP0DP75 135 aa11.71□□□□□ -0.53
SNX17-204ENST00000453453 COL6A5A8TX70 2615 aa11.71□□□□□ -0.53
SNX17-204ENST00000453453 STAB1Q9NY15 2570 aa11.71□□□□□ -0.53
SNX17-204ENST00000453453 A0A0J9YX75 114 aa11.71□□□□□ -0.54
SNX17-204ENST00000453453 F6UB75 175 aa11.71□□□□□ -0.54
SNX17-204ENST00000453453 H3BMG7 143 aa11.71□□□□□ -0.54
SNX17-204ENST00000453453 PPP1R17O96001 155 aa11.71□□□□□ -0.54
SNX17-204ENST00000453453 TOMM6Q96B49 74 aa11.71□□□□□ -0.54
SNX17-204ENST00000453453 DEFB1P60022 68 aa11.7□□□□□ -0.54
SNX17-204ENST00000453453 SMAGPQ0VAQ4 97 aa11.7□□□□□ -0.54
SNX17-204ENST00000453453 SPATA3Q8NHX4 192 aa11.7□□□□□ -0.54
SNX17-204ENST00000453453 C1QTNF4Q9BXJ3 329 aa11.7□□□□□ -0.54
SNX17-204ENST00000453453 GATA1P15976 413 aaPredicted RBP11.69□□□□□ -0.54
SNX17-204ENST00000453453 BEAN1Q3B7T3 259 aa11.69□□□□□ -0.54
SNX17-204ENST00000453453 ODF3L2Q3SX64 289 aa11.68□□□□□ -0.54
SNX17-204ENST00000453453 ETDBQ3ZM63 59 aa11.68□□□□□ -0.54
SNX17-204ENST00000453453 PAPPA-AS1Q5QFB9 102 aa11.68□□□□□ -0.54
SNX17-204ENST00000453453 NEXN-AS1Q8NBZ9 246 aa11.68□□□□□ -0.54
SNX17-204ENST00000453453 MDFIQ99750 246 aa11.68□□□□□ -0.54
SNX17-204ENST00000453453 FAM110AQ9BQ89 295 aa11.68□□□□□ -0.54
SNX17-204ENST00000453453 TRBV7-9A0A0J9YWB2 115 aa11.68□□□□□ -0.54
SNX17-204ENST00000453453 RPL32P62910 135 aaKnown RBP11.68□□□□□ -0.54
SNX17-204ENST00000453453 C11orf21Q9P2W6 132 aa11.68□□□□□ -0.54
SNX17-204ENST00000453453 KNCNA6PVL3 124 aa11.67□□□□□ -0.54
SNX17-204ENST00000453453 WIPF1O43516 503 aa11.67□□□□□ -0.54
SNX17-204ENST00000453453 UBE2D1P51668 147 aa11.67□□□□□ -0.54
SNX17-204ENST00000453453 SPANXN1Q5VSR9 72 aa11.67□□□□□ -0.54
SNX17-204ENST00000453453 CFAP126Q5VTH2 177 aa11.67□□□□□ -0.54
SNX17-204ENST00000453453 MORN3Q6PF18 240 aaPredicted RBP11.67□□□□□ -0.54
SNX17-204ENST00000453453 ODF3Q96PU9 254 aa11.67□□□□□ -0.54
SNX17-204ENST00000453453 SCGB3A1Q96QR1 104 aa11.67□□□□□ -0.54
SNX17-204ENST00000453453 APOMO95445 188 aa11.66□□□□□ -0.54
SNX17-204ENST00000453453 APRG1Q8IVJ8 170 aa11.66□□□□□ -0.54
SNX17-204ENST00000453453 SVIPQ8NHG7 77 aa11.66□□□□□ -0.54
SNX17-204ENST00000453453 MRPL16Q9NX20 251 aaKnown RBP11.66□□□□□ -0.54
SNX17-204ENST00000453453 CYSLTR1Q9Y271 337 aa11.66□□□□□ -0.54
SNX17-204ENST00000453453 SORL1Q92673 2214 aa11.66□□□□□ -0.54
SNX17-204ENST00000453453 IGKV3-20P01619 116 aa11.65□□□□□ -0.54
SNX17-204ENST00000453453 FOXI1Q12951 378 aa11.65□□□□□ -0.54
SNX17-204ENST00000453453 SH2D6Q7Z4S9 175 aa11.65□□□□□ -0.54
SNX17-204ENST00000453453 STHQ8IWL8 128 aa11.65□□□□□ -0.54
SNX17-204ENST00000453453 H3BMM0 161 aa11.64□□□□□ -0.55
SNX17-204ENST00000453453 M0QXV9 152 aa11.64□□□□□ -0.55
SNX17-204ENST00000453453 CD7P09564 240 aa11.64□□□□□ -0.55
SNX17-204ENST00000453453 SUMO2P61956 95 aaKnown RBP11.64□□□□□ -0.55
SNX17-204ENST00000453453 DPH3P1Q9H4G8 78 aa11.64□□□□□ -0.55
SNX17-204ENST00000453453 TRBV20-1A0A075B6N2 111 aa11.64□□□□□ -0.55
SNX17-204ENST00000453453 CKS1BP61024 79 aa11.64□□□□□ -0.55
SNX17-204ENST00000453453 UBE2D3P61077 147 aa11.64□□□□□ -0.55
SNX17-204ENST00000453453 UBE2D2P62837 147 aa11.64□□□□□ -0.55
SNX17-204ENST00000453453 POM121L12Q8N7R1 296 aa11.64□□□□□ -0.55
SNX17-204ENST00000453453 FAM19A4Q96LR4 140 aa11.64□□□□□ -0.55
SNX17-204ENST00000453453 VWFP04275 2813 aa11.63□□□□□ -0.55
SNX17-204ENST00000453453 HERVK_113P61574 105 aa11.63□□□□□ -0.55
SNX17-204ENST00000453453 CLUHP3Q96NS8 147 aa11.63□□□□□ -0.55
SNX17-204ENST00000453453 PGPEP1Q9NXJ5 209 aa11.63□□□□□ -0.55
SNX17-204ENST00000453453 A8MTW9 85 aa11.62□□□□□ -0.55
SNX17-204ENST00000453453 J3KRW8 73 aa11.62□□□□□ -0.55
SNX17-204ENST00000453453 SBSPONQ8IVN8 264 aa11.62□□□□□ -0.55
SNX17-204ENST00000453453 ZFAND2AQ8N6M9 145 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms