RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 TRAV8-6A0A0B4J262 113 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 C7orf77A4D0Y5 90 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 APOC3P02656 99 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 LINC00694P0DN24 101 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 RAB4AP20338 218 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 HBBP68871 147 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 RHEBQ15382 184 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 MRPL54Q6P161 138 aaKnown RBP10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 ATP5L2Q7Z4Y8 100 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 SLC7A5P1Q8MH63 180 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 GATD1Q8NB37 220 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 RPS10P5Q9NQ39 176 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 TMEM242Q9NWH2 141 aa10.04□□□□□ -0.8
NCKIPSD-207ENST00000453349 A0A087WWC5 75 aa10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 TRAV26-2A0A0B4J265 109 aa10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 SIVA1O15304 175 aa10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 SNAPINO95295 136 aa10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 S100PP25815 95 aa10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 OR10J3Q5JRS4 329 aa10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 LELP1Q5T871 98 aa10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 DAZ4Q86SG3 579 aaKnown RBP10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 AMN1Q8IY45 258 aa10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 SVBPQ8N300 66 aa10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 BTF3L4Q96K17 158 aa10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 DAZ3Q9NR90 486 aaKnown RBP10.03□□□□□ -0.8
NCKIPSD-207ENST00000453349 M0R2N4 97 aa10.02□□□□□ -0.81
NCKIPSD-207ENST00000453349 MRAP2Q96G30 205 aa10.02□□□□□ -0.81
NCKIPSD-207ENST00000453349 IGHV3-38A0A0C4DH36 116 aa10.01□□□□□ -0.81
NCKIPSD-207ENST00000453349 A0A1B0GXF2 115 aa10.01□□□□□ -0.81
NCKIPSD-207ENST00000453349 TMEM97Q5BJF2 176 aa10.01□□□□□ -0.81
NCKIPSD-207ENST00000453349 FAM104BQ5XKR9 115 aa10.01□□□□□ -0.81
NCKIPSD-207ENST00000453349 RNF185Q96GF1 192 aa10.01□□□□□ -0.81
NCKIPSD-207ENST00000453349 TRAV9-2A0A087WT02 112 aa10□□□□□ -0.81
NCKIPSD-207ENST00000453349 TRAV9-1A0A075B6T8 112 aa9.99□□□□□ -0.81
NCKIPSD-207ENST00000453349 NBDYA0A0U1RRE5 68 aa9.99□□□□□ -0.81
NCKIPSD-207ENST00000453349 PPP1R17O96001 155 aa9.99□□□□□ -0.81
NCKIPSD-207ENST00000453349 TTC32Q5I0X7 151 aa9.99□□□□□ -0.81
NCKIPSD-207ENST00000453349 WFDC10BQ8IUB3 73 aa9.99□□□□□ -0.81
NCKIPSD-207ENST00000453349 MRPL51Q4U2R6 128 aaKnown RBP9.98□□□□□ -0.81
NCKIPSD-207ENST00000453349 RPL39LQ96EH5 51 aaKnown RBP9.98□□□□□ -0.81
NCKIPSD-207ENST00000453349 ST20Q9HBF5 79 aa9.98□□□□□ -0.81
NCKIPSD-207ENST00000453349 DYNC2H1Q8NCM8 4307 aaKnown RBP9.98□□□□□ -0.81
NCKIPSD-207ENST00000453349 TRBV6-8A0A0A6YYG3 113 aa9.97□□□□□ -0.81
NCKIPSD-207ENST00000453349 K7EP13 123 aa9.97□□□□□ -0.81
NCKIPSD-207ENST00000453349 CKS2P33552 79 aa9.97□□□□□ -0.81
NCKIPSD-207ENST00000453349 URGCP-MRPS24S4R325 110 aa9.97□□□□□ -0.81
NCKIPSD-207ENST00000453349 TRBV6-5A0A0K0K1A5 114 aa9.96□□□□□ -0.82
NCKIPSD-207ENST00000453349 DNAH10OSP0CZ25 163 aa9.96□□□□□ -0.82
NCKIPSD-207ENST00000453349 Q6ZR54 194 aa9.96□□□□□ -0.82
NCKIPSD-207ENST00000453349 TRBV25-1A0A075B6N4 114 aa9.95□□□□□ -0.82
NCKIPSD-207ENST00000453349 SDHAF1A6NFY7 115 aa9.95□□□□□ -0.82
NCKIPSD-207ENST00000453349 SMKR1H3BMG3 65 aa9.95□□□□□ -0.82
NCKIPSD-207ENST00000453349 GAS8-AS1O95177 125 aa9.95□□□□□ -0.82
NCKIPSD-207ENST00000453349 NCR2O95944 276 aa9.95□□□□□ -0.82
NCKIPSD-207ENST00000453349 PPBPP02775 128 aa9.95□□□□□ -0.82
NCKIPSD-207ENST00000453349 PMCHP20382 165 aa9.95□□□□□ -0.82
NCKIPSD-207ENST00000453349 COTL1Q14019 142 aa9.95□□□□□ -0.82
NCKIPSD-207ENST00000453349 LINC01556Q5JQF7 62 aa9.95□□□□□ -0.82
NCKIPSD-207ENST00000453349 NTM-AS1Q6ZSK4 140 aa9.95□□□□□ -0.82
NCKIPSD-207ENST00000453349 IGHV1-24A0A0C4DH33 117 aa9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 TMEM262E9PQX1 116 aa9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 I3L3M4 83 aa9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 IGHV3-33P01772 117 aa9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 IGHV3-30-3P0DP02 117 aa9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 RPS10P46783 165 aaKnown RBP9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 COX19Q49B96 90 aa9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 C1orf134Q5TEV5 83 aa9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 C10orf126Q8N4M7 172 aa9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 CHCHD5Q9BSY4 110 aa9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 PLECQ15149 4684 aaKnown RBP9.94□□□□□ -0.82
NCKIPSD-207ENST00000453349 D6R8Y8 96 aa9.93□□□□□ -0.82
NCKIPSD-207ENST00000453349 PKIAP61925 76 aa9.93□□□□□ -0.82
NCKIPSD-207ENST00000453349 TMEM136Q6ZRR5 245 aa9.93□□□□□ -0.82
NCKIPSD-207ENST00000453349 TRBV24-1A0A075B6N3 115 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 A0A087WX48 190 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 VCYO14598 125 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 TNFRSF6BO95407 300 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 BTF3P20290 206 aaKnown RBP9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 POLR2KP53803 58 aaKnown RBP9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 SUMO2P61956 95 aaKnown RBP9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 IQCJQ1A5X6 159 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 NIT1Q86X76 327 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 ORMDL3Q8N138 153 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 C6orf223Q8N319 242 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 NRACQ8N912 160 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 DEFB104AQ8WTQ1 72 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 C20orf78Q9BR46 151 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 TMEM70Q9BUB7 260 aa9.92□□□□□ -0.82
NCKIPSD-207ENST00000453349 PHOX2AO14813 284 aa9.91□□□□□ -0.82
NCKIPSD-207ENST00000453349 AMTP48728 403 aa9.91□□□□□ -0.82
NCKIPSD-207ENST00000453349 PRELID3AQ96N28 172 aa9.91□□□□□ -0.82
NCKIPSD-207ENST00000453349 TMEM243Q9BU79 118 aa9.91□□□□□ -0.82
NCKIPSD-207ENST00000453349 CHCHD7Q9BUK0 85 aa9.91□□□□□ -0.82
NCKIPSD-207ENST00000453349 GNB1LQ9BYB4 327 aa9.91□□□□□ -0.82
NCKIPSD-207ENST00000453349 TRBV27A0A0K0K1C4 114 aa9.9□□□□□ -0.82
NCKIPSD-207ENST00000453349 UBE2L6O14933 153 aa9.9□□□□□ -0.82
NCKIPSD-207ENST00000453349 HLA-DQA1P01909 254 aa9.9□□□□□ -0.82
NCKIPSD-207ENST00000453349 APCSP02743 223 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 290.3 ms