RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 WDR73Q6P4I2 378 aa13.66□□□□□ -0.22
TNFRSF25-208ENST00000453341 NTM-AS1Q6ZSK4 140 aa13.66□□□□□ -0.22
TNFRSF25-208ENST00000453341 PRR3P79522 188 aaKnown RBP13.65□□□□□ -0.22
TNFRSF25-208ENST00000453341 C7orf33Q8WU49 177 aa13.65□□□□□ -0.22
TNFRSF25-208ENST00000453341 TPT1P13693 172 aaKnown RBP13.64□□□□□ -0.23
TNFRSF25-208ENST00000453341 PKIAP61925 76 aa13.64□□□□□ -0.23
TNFRSF25-208ENST00000453341 PRR27Q6MZM9 219 aa13.64□□□□□ -0.23
TNFRSF25-208ENST00000453341 Q86TA4 180 aa13.64□□□□□ -0.23
TNFRSF25-208ENST00000453341 TMEM167BQ9NRX6 74 aa13.64□□□□□ -0.23
TNFRSF25-208ENST00000453341 IGLV10-54A0A075B6I4 117 aa13.63□□□□□ -0.23
TNFRSF25-208ENST00000453341 SH2D1AO60880 128 aa13.63□□□□□ -0.23
TNFRSF25-208ENST00000453341 AKR1C8PQ5T2L2 129 aa13.63□□□□□ -0.23
TNFRSF25-208ENST00000453341 ZFP82Q8N141 532 aa13.63□□□□□ -0.23
TNFRSF25-208ENST00000453341 CTXND1A0A1B0GTU2 59 aa13.62□□□□□ -0.23
TNFRSF25-208ENST00000453341 GAGE6Q13070 117 aa13.62□□□□□ -0.23
TNFRSF25-208ENST00000453341 TMSB15BA0A087X1C1 80 aa13.61□□□□□ -0.23
TNFRSF25-208ENST00000453341 UBE2G2P60604 165 aa13.61□□□□□ -0.23
TNFRSF25-208ENST00000453341 RAB4BP61018 213 aa13.61□□□□□ -0.23
TNFRSF25-208ENST00000453341 KCNRGQ8N5I3 272 aa13.61□□□□□ -0.23
TNFRSF25-208ENST00000453341 ZNF56Q15929 161 aa13.6□□□□□ -0.23
TNFRSF25-208ENST00000453341 GTSF1Q8WW33 167 aa13.6□□□□□ -0.23
TNFRSF25-208ENST00000453341 MUC2Q02817 5179 aa13.59□□□□□ -0.23
TNFRSF25-208ENST00000453341 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF25-208ENST00000453341 REG3AQ06141 175 aa13.59□□□□□ -0.23
TNFRSF25-208ENST00000453341 AP5S1Q9NUS5 200 aa13.59□□□□□ -0.23
TNFRSF25-208ENST00000453341 MUC21A0A0G2JKD1 596 aa13.58□□□□□ -0.24
TNFRSF25-208ENST00000453341 A0A1W2PRE2 83 aa13.58□□□□□ -0.24
TNFRSF25-208ENST00000453341 PEX7O00628 323 aa13.58□□□□□ -0.24
TNFRSF25-208ENST00000453341 FHITP49789 147 aa13.58□□□□□ -0.24
TNFRSF25-208ENST00000453341 ZNF345Q14585 488 aa13.58□□□□□ -0.24
TNFRSF25-208ENST00000453341 LINC01559Q495D7 138 aa13.58□□□□□ -0.24
TNFRSF25-208ENST00000453341 COX8CQ7Z4L0 72 aa13.58□□□□□ -0.24
TNFRSF25-208ENST00000453341 VAX2Q9UIW0 290 aa13.58□□□□□ -0.24
TNFRSF25-208ENST00000453341 MAP1LC3B2A6NCE7 125 aa13.57□□□□□ -0.24
TNFRSF25-208ENST00000453341 HMSDA8MTL9 139 aa13.57□□□□□ -0.24
TNFRSF25-208ENST00000453341 FAM162BQ5T6X4 162 aa13.57□□□□□ -0.24
TNFRSF25-208ENST00000453341 MAP1LC3BQ9GZQ8 125 aa13.57□□□□□ -0.24
TNFRSF25-208ENST00000453341 FAM74A7A6NL05 159 aa13.56□□□□□ -0.24
TNFRSF25-208ENST00000453341 IFNA7P01567 189 aa13.56□□□□□ -0.24
TNFRSF25-208ENST00000453341 COX6A2Q02221 97 aa13.56□□□□□ -0.24
TNFRSF25-208ENST00000453341 C20orf203Q8NBC4 194 aa13.56□□□□□ -0.24
TNFRSF25-208ENST00000453341 DERL1Q9BUN8 251 aa13.56□□□□□ -0.24
TNFRSF25-208ENST00000453341 KRTAP9-2Q9BYQ4 174 aa13.56□□□□□ -0.24
TNFRSF25-208ENST00000453341 TRBV6-1A0A0K0K1D8 114 aa13.55□□□□□ -0.24
TNFRSF25-208ENST00000453341 ZNF674Q2M3X9 581 aa13.55□□□□□ -0.24
TNFRSF25-208ENST00000453341 TMEM97Q5BJF2 176 aa13.55□□□□□ -0.24
TNFRSF25-208ENST00000453341 SPINK6Q6UWN8 80 aa13.55□□□□□ -0.24
TNFRSF25-208ENST00000453341 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF25-208ENST00000453341 ZNF471Q9BX82 626 aaPredicted RBP13.55□□□□□ -0.24
TNFRSF25-208ENST00000453341 GFRA4Q9GZZ7 299 aa13.55□□□□□ -0.24
TNFRSF25-208ENST00000453341 TRBV25-1A0A075B6N4 114 aa13.54□□□□□ -0.24
TNFRSF25-208ENST00000453341 BCL2L11O43521 198 aa13.54□□□□□ -0.24
TNFRSF25-208ENST00000453341 RAB5CP51148 216 aa13.54□□□□□ -0.24
TNFRSF25-208ENST00000453341 MAJINQ3KP22 176 aa13.54□□□□□ -0.24
TNFRSF25-208ENST00000453341 REG3GQ6UW15 175 aa13.54□□□□□ -0.24
TNFRSF25-208ENST00000453341 OR10AG1Q8NH19 301 aa13.54□□□□□ -0.24
TNFRSF25-208ENST00000453341 LYPD6BQ8NI32 183 aa13.54□□□□□ -0.24
TNFRSF25-208ENST00000453341 TRAV8-4A0A0B4J246 113 aa13.53□□□□□ -0.24
TNFRSF25-208ENST00000453341 KANTRA0A1W2PQU2 76 aa13.53□□□□□ -0.24
TNFRSF25-208ENST00000453341 P01737 135 aa13.53□□□□□ -0.24
TNFRSF25-208ENST00000453341 IQCJQ1A5X6 159 aa13.53□□□□□ -0.24
TNFRSF25-208ENST00000453341 PRSS3P2Q8NHM4 247 aa13.53□□□□□ -0.24
TNFRSF25-208ENST00000453341 IGKV2-24A0A0C4DH68 120 aa13.52□□□□□ -0.25
TNFRSF25-208ENST00000453341 TMUB2Q71RG4 321 aa13.52□□□□□ -0.25
TNFRSF25-208ENST00000453341 C15orf56Q8N910 161 aa13.52□□□□□ -0.25
TNFRSF25-208ENST00000453341 ZFP30Q9Y2G7 519 aa13.52□□□□□ -0.25
TNFRSF25-208ENST00000453341 A0A1B0GV50 99 aa13.51□□□□□ -0.25
TNFRSF25-208ENST00000453341 STPG4Q8N801 248 aa13.51□□□□□ -0.25
TNFRSF25-208ENST00000453341 FAM213BQ8TBF2 198 aa13.51□□□□□ -0.25
TNFRSF25-208ENST00000453341 IGLV4-60A0A075B6I1 120 aa13.5□□□□□ -0.25
TNFRSF25-208ENST00000453341 NDUFS6O75380 124 aaKnown RBP13.5□□□□□ -0.25
TNFRSF25-208ENST00000453341 SRSF9Q13242 221 aaKnown RBP eCLIP13.5□□□□□ -0.25
TNFRSF25-208ENST00000453341 STOML3Q8TAV4 291 aa13.5□□□□□ -0.25
TNFRSF25-208ENST00000453341 SFT2D1Q8WV19 159 aa13.5□□□□□ -0.25
TNFRSF25-208ENST00000453341 HIST1H2BAQ96A08 127 aa13.5□□□□□ -0.25
TNFRSF25-208ENST00000453341 IGHV1-24A0A0C4DH33 117 aa13.49□□□□□ -0.25
TNFRSF25-208ENST00000453341 F5H697 171 aa13.49□□□□□ -0.25
TNFRSF25-208ENST00000453341 PFDN1O60925 122 aa13.49□□□□□ -0.25
TNFRSF25-208ENST00000453341 CST9LP1Q5W188 147 aa13.49□□□□□ -0.25
TNFRSF25-208ENST00000453341 NKX6-2Q9C056 277 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF25-208ENST00000453341 MUC21A0A140T8X8 626 aa13.48□□□□□ -0.25
TNFRSF25-208ENST00000453341 PAGE4O60829 102 aa13.48□□□□□ -0.25
TNFRSF25-208ENST00000453341 GZMBP10144 247 aa13.48□□□□□ -0.25
TNFRSF25-208ENST00000453341 MBD3L1Q8WWY6 194 aa13.48□□□□□ -0.25
TNFRSF25-208ENST00000453341 FMC1Q96HJ9 113 aa13.48□□□□□ -0.25
TNFRSF25-208ENST00000453341 UMAD1C9J7I0 102 aa13.47□□□□□ -0.25
TNFRSF25-208ENST00000453341 RPS10P46783 165 aaKnown RBP13.47□□□□□ -0.25
TNFRSF25-208ENST00000453341 LTAP01374 205 aa13.46□□□□□ -0.25
TNFRSF25-208ENST00000453341 Q6ZNX1 250 aa13.46□□□□□ -0.25
TNFRSF25-208ENST00000453341 A0A096LNI7 61 aa13.45□□□□□ -0.26
TNFRSF25-208ENST00000453341 A0A1B0GUV1 79 aa13.45□□□□□ -0.26
TNFRSF25-208ENST00000453341 SNAI2O43623 268 aa13.45□□□□□ -0.26
TNFRSF25-208ENST00000453341 UBE2G1P62253 170 aa13.45□□□□□ -0.26
TNFRSF25-208ENST00000453341 EIF5AP63241 154 aaKnown RBP13.45□□□□□ -0.26
TNFRSF25-208ENST00000453341 HIGD2BQ4VC39 106 aa13.45□□□□□ -0.26
TNFRSF25-208ENST00000453341 TCTE3Q8IZS6 198 aa13.44□□□□□ -0.26
TNFRSF25-208ENST00000453341 SSBP4Q9BWG4 385 aaPredicted RBP13.44□□□□□ -0.26
TNFRSF25-208ENST00000453341 H2AFB1P0C5Y9 115 aa13.43□□□□□ -0.26
TNFRSF25-208ENST00000453341 SSTP61278 116 aa13.43□□□□□ -0.26
TNFRSF25-208ENST00000453341 hCG_2014768A0A024R1R8 64 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms