RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ZNF56Q15929 161 aa7.07□□□□□ -1.28
USP1-204ENST00000452143 MIAQ16674 131 aa7.07□□□□□ -1.28
USP1-204ENST00000452143 MPV17L2Q567V2 206 aa7.07□□□□□ -1.28
USP1-204ENST00000452143 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.07□□□□□ -1.28
USP1-204ENST00000452143 MAP1LC3BQ9GZQ8 125 aa7.07□□□□□ -1.28
USP1-204ENST00000452143 FXYD6-FXYD2A0A087WZ82 144 aa7.06□□□□□ -1.28
USP1-204ENST00000452143 TMEM262E9PQX1 116 aa7.06□□□□□ -1.28
USP1-204ENST00000452143 AKR1C3P42330 323 aa7.06□□□□□ -1.28
USP1-204ENST00000452143 TMEM97Q5BJF2 176 aa7.06□□□□□ -1.28
USP1-204ENST00000452143 Q5BKY6 102 aa7.06□□□□□ -1.28
USP1-204ENST00000452143 PRR27Q6MZM9 219 aa7.06□□□□□ -1.28
USP1-204ENST00000452143 ENHOQ6UWT2 76 aa7.06□□□□□ -1.28
USP1-204ENST00000452143 USP17L23D6RBM5 183 aa7.05□□□□□ -1.28
USP1-204ENST00000452143 HLA-DQA1P01909 254 aa7.05□□□□□ -1.28
USP1-204ENST00000452143 ANGP03950 147 aaKnown RBP7.05□□□□□ -1.28
USP1-204ENST00000452143 RPL37AP61513 92 aaKnown RBP7.05□□□□□ -1.28
USP1-204ENST00000452143 DGAT2L7PQ6IED9 249 aa7.05□□□□□ -1.28
USP1-204ENST00000452143 C15orf54Q8N8G6 183 aa7.05□□□□□ -1.28
USP1-204ENST00000452143 NEXN-AS1Q8NBZ9 246 aa7.05□□□□□ -1.28
USP1-204ENST00000452143 STOML3Q8TAV4 291 aa7.05□□□□□ -1.28
USP1-204ENST00000452143 SNAI2O43623 268 aa7.04□□□□□ -1.28
USP1-204ENST00000452143 S100A9P06702 114 aaKnown RBP7.04□□□□□ -1.28
USP1-204ENST00000452143 CST9LP1Q5W188 147 aa7.04□□□□□ -1.28
USP1-204ENST00000452143 OR10AG1Q8NH19 301 aa7.04□□□□□ -1.28
USP1-204ENST00000452143 CHCHD5Q9BSY4 110 aa7.04□□□□□ -1.28
USP1-204ENST00000452143 ZNF471Q9BX82 626 aaPredicted RBP7.04□□□□□ -1.28
USP1-204ENST00000452143 PRR34Q9NV39 138 aa7.04□□□□□ -1.28
USP1-204ENST00000452143 VAX2Q9UIW0 290 aa7.04□□□□□ -1.28
USP1-204ENST00000452143 PLA2G2DQ9UNK4 145 aa7.04□□□□□ -1.28
USP1-204ENST00000452143 OR5AL1P0C617 328 aa7.03□□□□□ -1.28
USP1-204ENST00000452143 C9orf163Q8N9P6 203 aa7.03□□□□□ -1.28
USP1-204ENST00000452143 TRBV25-1A0A075B6N4 114 aa7.02□□□□□ -1.29
USP1-204ENST00000452143 PRSS1P07477 247 aa7.02□□□□□ -1.29
USP1-204ENST00000452143 RPL19P84098 196 aaKnown RBP7.02□□□□□ -1.29
USP1-204ENST00000452143 SPANXN1Q5VSR9 72 aa7.02□□□□□ -1.29
USP1-204ENST00000452143 AP1S3Q96PC3 154 aa7.02□□□□□ -1.29
USP1-204ENST00000452143 MLST8Q9BVC4 326 aa7.02□□□□□ -1.29
USP1-204ENST00000452143 ARPC5O15511 151 aa7.01□□□□□ -1.29
USP1-204ENST00000452143 PAGE4O60829 102 aa7.01□□□□□ -1.29
USP1-204ENST00000452143 SMIM17P0DL12 118 aa7.01□□□□□ -1.29
USP1-204ENST00000452143 CLRN3Q8NCR9 226 aa7.01□□□□□ -1.29
USP1-204ENST00000452143 CYTL1Q9NRR1 136 aa7.01□□□□□ -1.29
USP1-204ENST00000452143 F5H697 171 aa7□□□□□ -1.29
USP1-204ENST00000452143 G3V3Q6 166 aa7□□□□□ -1.29
USP1-204ENST00000452143 PFDN1O60925 122 aa7□□□□□ -1.29
USP1-204ENST00000452143 RBX1P62877 108 aa7□□□□□ -1.29
USP1-204ENST00000452143 IQCJQ1A5X6 159 aa7□□□□□ -1.29
USP1-204ENST00000452143 KRTAP26-1Q6PEX3 210 aa7□□□□□ -1.29
USP1-204ENST00000452143 NTM-AS1Q6ZSK4 140 aa7□□□□□ -1.29
USP1-204ENST00000452143 LINC00269Q8N2A0 174 aa7□□□□□ -1.29
USP1-204ENST00000452143 DAZAP1Q96EP5 407 aaKnown RBP7□□□□□ -1.29
USP1-204ENST00000452143 DERL1Q9BUN8 251 aa7□□□□□ -1.29
USP1-204ENST00000452143 KIF25-AS1Q9Y6Z4 181 aa7□□□□□ -1.29
USP1-204ENST00000452143 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
USP1-204ENST00000452143 A0A0D9SG52 128 aa6.99□□□□□ -1.29
USP1-204ENST00000452143 UMAD1C9J7I0 102 aa6.99□□□□□ -1.29
USP1-204ENST00000452143 H7C1H1 209 aa6.99□□□□□ -1.29
USP1-204ENST00000452143 HNRNPA3P51991 378 aaKnown RBP6.99□□□□□ -1.29
USP1-204ENST00000452143 CNBPP62633 177 aaKnown RBP6.99□□□□□ -1.29
USP1-204ENST00000452143 CIRBPQ14011 172 aaKnown RBP6.99□□□□□ -1.29
USP1-204ENST00000452143 CLPSL2Q6UWE3 100 aa6.99□□□□□ -1.29
USP1-204ENST00000452143 BAGE2Q86Y30 109 aa6.99□□□□□ -1.29
USP1-204ENST00000452143 MBD3L1Q8WWY6 194 aa6.99□□□□□ -1.29
USP1-204ENST00000452143 BATF3Q9NR55 127 aa6.99□□□□□ -1.29
USP1-204ENST00000452143 TRAV8-4A0A0B4J246 113 aa6.98□□□□□ -1.29
USP1-204ENST00000452143 IGHV1-24A0A0C4DH33 117 aa6.98□□□□□ -1.29
USP1-204ENST00000452143 P01737 135 aa6.98□□□□□ -1.29
USP1-204ENST00000452143 REG3AQ06141 175 aa6.98□□□□□ -1.29
USP1-204ENST00000452143 GAGE6Q13070 117 aa6.98□□□□□ -1.29
USP1-204ENST00000452143 ZNF345Q14585 488 aa6.98□□□□□ -1.29
USP1-204ENST00000452143 SDIM1Q6ZPB5 146 aa6.98□□□□□ -1.29
USP1-204ENST00000452143 SFT2D1Q8WV19 159 aa6.98□□□□□ -1.29
USP1-204ENST00000452143 PANO1I0J062 215 aa6.97□□□□□ -1.29
USP1-204ENST00000452143 Q6ZRU5 148 aa6.97□□□□□ -1.29
USP1-204ENST00000452143 FAM213BQ8TBF2 198 aa6.97□□□□□ -1.29
USP1-204ENST00000452143 MRPL18Q9H0U6 180 aaKnown RBP6.97□□□□□ -1.29
USP1-204ENST00000452143 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.96□□□□□ -1.3
USP1-204ENST00000452143 MUC21A0A0G2JKD1 596 aa6.96□□□□□ -1.3
USP1-204ENST00000452143 MUC21A0A140T8X8 626 aa6.96□□□□□ -1.3
USP1-204ENST00000452143 A0A1B0GUV1 79 aa6.96□□□□□ -1.3
USP1-204ENST00000452143 hDV102S1A0JD36 115 aa6.96□□□□□ -1.3
USP1-204ENST00000452143 M0QY20 66 aa6.96□□□□□ -1.3
USP1-204ENST00000452143 GZMBP10144 247 aa6.96□□□□□ -1.3
USP1-204ENST00000452143 RPL35P42766 123 aaKnown RBP6.96□□□□□ -1.3
USP1-204ENST00000452143 TMUB2Q71RG4 321 aa6.96□□□□□ -1.3
USP1-204ENST00000452143 KCNRGQ8N5I3 272 aa6.96□□□□□ -1.3
USP1-204ENST00000452143 C20orf203Q8NBC4 194 aa6.96□□□□□ -1.3
USP1-204ENST00000452143 RNF185Q96GF1 192 aa6.96□□□□□ -1.3
USP1-204ENST00000452143 IGLV10-54A0A075B6I4 117 aa6.95□□□□□ -1.3
USP1-204ENST00000452143 IGHV3-64A0A075B6Q5 118 aa6.95□□□□□ -1.3
USP1-204ENST00000452143 A0A1B0GV50 99 aa6.95□□□□□ -1.3
USP1-204ENST00000452143 IGLC6P0CF74 106 aa6.95□□□□□ -1.3
USP1-204ENST00000452143 MT1HL1P0DM35 61 aa6.95□□□□□ -1.3
USP1-204ENST00000452143 RPS20P60866 119 aaKnown RBP6.95□□□□□ -1.3
USP1-204ENST00000452143 SSTP61278 116 aa6.95□□□□□ -1.3
USP1-204ENST00000452143 C11orf52Q96A22 123 aa6.95□□□□□ -1.3
USP1-204ENST00000452143 PGLYRP4Q96LB8 373 aa6.95□□□□□ -1.3
USP1-204ENST00000452143 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
USP1-204ENST00000452143 MGPP08493 103 aa6.94□□□□□ -1.3
USP1-204ENST00000452143 CACNG7P62955 275 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms