RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 J3QR89 54 aa6.71□□□□□ -1.34
LINC01238-204ENST00000451070 K7EQD1 137 aa6.71□□□□□ -1.34
LINC01238-204ENST00000451070 DNAH10OSP0CZ25 163 aa6.71□□□□□ -1.34
LINC01238-204ENST00000451070 IGLC3P0DOY3 106 aa6.71□□□□□ -1.34
LINC01238-204ENST00000451070 XGP55808 180 aa6.71□□□□□ -1.34
LINC01238-204ENST00000451070 TDRG1Q3Y452 100 aa6.71□□□□□ -1.34
LINC01238-204ENST00000451070 C5orf17Q8NAS9 161 aa6.71□□□□□ -1.34
LINC01238-204ENST00000451070 PPP1R1CQ8WVI7 109 aa6.71□□□□□ -1.34
LINC01238-204ENST00000451070 RASL10AQ92737 203 aa6.71□□□□□ -1.34
LINC01238-204ENST00000451070 TRGV4A0A0C4DH28 118 aa6.7□□□□□ -1.34
LINC01238-204ENST00000451070 DIRC3C9JPN6 131 aa6.7□□□□□ -1.34
LINC01238-204ENST00000451070 C17orf112F2Z3M2 114 aa6.7□□□□□ -1.34
LINC01238-204ENST00000451070 SEC11BP0C7V7 166 aa6.7□□□□□ -1.34
LINC01238-204ENST00000451070 CSN1S1P47710 185 aa6.7□□□□□ -1.34
LINC01238-204ENST00000451070 UBE2L3P68036 154 aaKnown RBP6.7□□□□□ -1.34
LINC01238-204ENST00000451070 HSD52Q0P140 79 aa6.7□□□□□ -1.34
LINC01238-204ENST00000451070 FFAR4Q5NUL3 377 aa6.7□□□□□ -1.34
LINC01238-204ENST00000451070 WFDC10BQ8IUB3 73 aa6.7□□□□□ -1.34
LINC01238-204ENST00000451070 ATP5SQ99766 215 aa6.7□□□□□ -1.34
LINC01238-204ENST00000451070 EIF5A2Q9GZV4 153 aaKnown RBP6.7□□□□□ -1.34
LINC01238-204ENST00000451070 LENEPQ9Y5L5 61 aa6.7□□□□□ -1.34
LINC01238-204ENST00000451070 LY96Q9Y6Y9 160 aa6.7□□□□□ -1.34
LINC01238-204ENST00000451070 HERC1Q15751 4861 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 A0A087WTM6 91 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 SNAI2O43623 268 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 TYMSP04818 313 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 PET100P0DJ07 73 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 GYPEP15421 78 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 ATP6V0CP27449 155 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 SRIP30626 198 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 GNG4P50150 75 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 KRTAP10-1P60331 282 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 FAM159AQ6UWV7 190 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 NFE4Q86UQ8 179 aa6.69□□□□□ -1.34
LINC01238-204ENST00000451070 TRGV11A0A075B6L2 103 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 TRAV4A0A0B4J268 109 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 LOC100131303A0A0U1RQF7 123 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 MAP1LC3B2A6NCE7 125 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 EPM2AB3EWF7 344 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 GNRH2O43555 120 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 SUMO1P63165 101 aaKnown RBP6.68□□□□□ -1.34
LINC01238-204ENST00000451070 UFSP1Q6NVU6 142 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 MRPL54Q6P161 138 aaKnown RBP6.68□□□□□ -1.34
LINC01238-204ENST00000451070 Q6ZN92 141 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 OR5A1Q8NGJ0 315 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 SMIM3Q9BZL3 60 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 MAP1LC3BQ9GZQ8 125 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 OTORQ9NRC9 128 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 MSRB1Q9NZV6 116 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 ERG28Q9UKR5 140 aa6.68□□□□□ -1.34
LINC01238-204ENST00000451070 TRAV9-2A0A087WT02 112 aa6.67□□□□□ -1.34
LINC01238-204ENST00000451070 IGHV3-16A0A0C4DH30 117 aa6.67□□□□□ -1.34
LINC01238-204ENST00000451070 PGPA6NDG6 321 aa6.67□□□□□ -1.34
LINC01238-204ENST00000451070 ZNF727A8MUV8 499 aa6.67□□□□□ -1.34
LINC01238-204ENST00000451070 M0R2P5 195 aa6.67□□□□□ -1.34
LINC01238-204ENST00000451070 TAX1BP3O14907 124 aa6.67□□□□□ -1.34
LINC01238-204ENST00000451070 ORM1P02763 201 aa6.67□□□□□ -1.34
LINC01238-204ENST00000451070 TAS2R45P59539 299 aa6.67□□□□□ -1.34
LINC01238-204ENST00000451070 SMAGPQ0VAQ4 97 aa6.67□□□□□ -1.34
LINC01238-204ENST00000451070 DMBT1Q9UGM3 2413 aaPredicted RBP6.66□□□□□ -1.34
LINC01238-204ENST00000451070 TRAV8-1A0A0A6YYK1 113 aa6.66□□□□□ -1.34
LINC01238-204ENST00000451070 GAGE12HA6NDE8 117 aa6.66□□□□□ -1.34
LINC01238-204ENST00000451070 C9JCJ5 164 aa6.66□□□□□ -1.34
LINC01238-204ENST00000451070 SRP19P09132 144 aaKnown RBP6.66□□□□□ -1.34
LINC01238-204ENST00000451070 GATA1P15976 413 aaPredicted RBP6.66□□□□□ -1.34
LINC01238-204ENST00000451070 EVI2AP22794 236 aa6.66□□□□□ -1.34
LINC01238-204ENST00000451070 RPL12P30050 165 aaKnown RBP6.66□□□□□ -1.34
LINC01238-204ENST00000451070 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
LINC01238-204ENST00000451070 GOLT1AQ6ZVE7 132 aa6.66□□□□□ -1.34
LINC01238-204ENST00000451070 SCGB1C1Q8TD33 95 aa6.66□□□□□ -1.34
LINC01238-204ENST00000451070 TXNDC17Q9BRA2 123 aa6.66□□□□□ -1.34
LINC01238-204ENST00000451070 SS18L2Q9UHA2 77 aa6.66□□□□□ -1.34
LINC01238-204ENST00000451070 VPS13BQ7Z7G8 4022 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 TRAV21A0A0B4J279 112 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 RBFOX3A6NFN3 312 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 CRYGDP07320 174 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 PFN1P07737 140 aaKnown RBP6.65□□□□□ -1.34
LINC01238-204ENST00000451070 GNG5P63218 68 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 SPATA45Q537H7 98 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 ZNF506Q5JVG8 444 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 PQLC2Q6ZP29 291 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 FA2HQ7L5A8 372 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 CMTM2Q8TAZ6 248 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 HSPB8Q9UJY1 196 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 PAM16Q9Y3D7 125 aa6.65□□□□□ -1.34
LINC01238-204ENST00000451070 FLG2Q5D862 2391 aaPredicted RBP6.65□□□□□ -1.35
LINC01238-204ENST00000451070 MYCBP2O75592 4640 aa6.64□□□□□ -1.35
LINC01238-204ENST00000451070 DNAH8Q96JB1 4490 aa6.64□□□□□ -1.35
LINC01238-204ENST00000451070 GAGE10A6NGK3 116 aa6.64□□□□□ -1.35
LINC01238-204ENST00000451070 FAM229AH3BQW9 127 aa6.64□□□□□ -1.35
LINC01238-204ENST00000451070 HMGB3O15347 200 aaKnown RBP6.64□□□□□ -1.35
LINC01238-204ENST00000451070 INAFM2P0DMQ5 153 aa6.64□□□□□ -1.35
LINC01238-204ENST00000451070 TIRAPP58753 221 aa6.64□□□□□ -1.35
LINC01238-204ENST00000451070 RPL24P83731 157 aaKnown RBP6.64□□□□□ -1.35
LINC01238-204ENST00000451070 PMCHL1Q16048 86 aa6.64□□□□□ -1.35
LINC01238-204ENST00000451070 Q5VSD8 79 aa6.64□□□□□ -1.35
LINC01238-204ENST00000451070 AMMECR1LQ6DCA0 310 aa6.64□□□□□ -1.35
LINC01238-204ENST00000451070 DPPA3Q6W0C5 159 aa6.64□□□□□ -1.35
LINC01238-204ENST00000451070 C10orf126Q8N4M7 172 aa6.64□□□□□ -1.35
LINC01238-204ENST00000451070 SMIM20Q8N5G0 67 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms