RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 COX11Q9Y6N1 276 aa10.37□□□□□ -0.75
LIMS1-210ENST00000449684 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
LIMS1-210ENST00000449684 F2Z2F3 143 aa10.36□□□□□ -0.75
LIMS1-210ENST00000449684 NTN5Q8WTR8 489 aaPredicted RBP10.36□□□□□ -0.75
LIMS1-210ENST00000449684 TRBV6-8A0A0A6YYG3 113 aa10.35□□□□□ -0.75
LIMS1-210ENST00000449684 H7C1H1 209 aa10.35□□□□□ -0.75
LIMS1-210ENST00000449684 IGLC6P0CF74 106 aa10.35□□□□□ -0.75
LIMS1-210ENST00000449684 TMEM97Q5BJF2 176 aa10.35□□□□□ -0.75
LIMS1-210ENST00000449684 Q8N1X5 172 aa10.35□□□□□ -0.75
LIMS1-210ENST00000449684 Q8N814 137 aa10.35□□□□□ -0.75
LIMS1-210ENST00000449684 UBE2WQ96B02 151 aa10.35□□□□□ -0.75
LIMS1-210ENST00000449684 CHCHD7Q9BUK0 85 aa10.35□□□□□ -0.75
LIMS1-210ENST00000449684 ABCA13Q86UQ4 5058 aa10.34□□□□□ -0.75
LIMS1-210ENST00000449684 TRBV20OR9-2A0A075B6H5 130 aa10.34□□□□□ -0.75
LIMS1-210ENST00000449684 IGKV2D-24A0A075B6R9 120 aa10.34□□□□□ -0.75
LIMS1-210ENST00000449684 TRGC1P0CF51 173 aa10.34□□□□□ -0.75
LIMS1-210ENST00000449684 CEBPGP53567 150 aa10.34□□□□□ -0.75
LIMS1-210ENST00000449684 LYZL1Q6UWQ5 148 aa10.34□□□□□ -0.75
LIMS1-210ENST00000449684 NUDT10Q8NFP7 164 aa10.34□□□□□ -0.75
LIMS1-210ENST00000449684 NUDT11Q96G61 164 aa10.34□□□□□ -0.75
LIMS1-210ENST00000449684 CHCHD5Q9BSY4 110 aa10.34□□□□□ -0.75
LIMS1-210ENST00000449684 KRTAP10-1P60331 282 aa10.33□□□□□ -0.76
LIMS1-210ENST00000449684 PKIAP61925 76 aa10.33□□□□□ -0.76
LIMS1-210ENST00000449684 KRTAP4-5Q9BYR2 181 aa10.33□□□□□ -0.76
LIMS1-210ENST00000449684 KIF25-AS1Q9Y6Z4 181 aa10.33□□□□□ -0.76
LIMS1-210ENST00000449684 APOBP04114 4563 aaKnown RBP10.33□□□□□ -0.76
LIMS1-210ENST00000449684 LECT2O14960 151 aa10.32□□□□□ -0.76
LIMS1-210ENST00000449684 CRPP02741 224 aa10.32□□□□□ -0.76
LIMS1-210ENST00000449684 DNAJC30Q96LL9 226 aa10.32□□□□□ -0.76
LIMS1-210ENST00000449684 RPP21Q9H633 154 aaKnown RBP10.32□□□□□ -0.76
LIMS1-210ENST00000449684 TMEM250H0YL14 139 aa10.31□□□□□ -0.76
LIMS1-210ENST00000449684 NTF3P20783 257 aa10.31□□□□□ -0.76
LIMS1-210ENST00000449684 Q0VG73 95 aa10.31□□□□□ -0.76
LIMS1-210ENST00000449684 TWIST1Q15672 202 aa10.31□□□□□ -0.76
LIMS1-210ENST00000449684 C15orf54Q8N8G6 183 aa10.31□□□□□ -0.76
LIMS1-210ENST00000449684 OCC1Q8TAD7 63 aa10.31□□□□□ -0.76
LIMS1-210ENST00000449684 BAALCQ8WXS3 180 aa10.31□□□□□ -0.76
LIMS1-210ENST00000449684 EIF5A2Q9GZV4 153 aaKnown RBP10.31□□□□□ -0.76
LIMS1-210ENST00000449684 RNASE7Q9H1E1 156 aaKnown RBP10.31□□□□□ -0.76
LIMS1-210ENST00000449684 DPH3P1Q9H4G8 78 aa10.31□□□□□ -0.76
LIMS1-210ENST00000449684 TRBV25-1A0A075B6N4 114 aa10.3□□□□□ -0.76
LIMS1-210ENST00000449684 ANGP03950 147 aaKnown RBP10.3□□□□□ -0.76
LIMS1-210ENST00000449684 NKX2-5P52952 324 aaPredicted RBP10.3□□□□□ -0.76
LIMS1-210ENST00000449684 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
LIMS1-210ENST00000449684 SMIM15Q7Z3B0 74 aa10.3□□□□□ -0.76
LIMS1-210ENST00000449684 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.29□□□□□ -0.76
LIMS1-210ENST00000449684 EPM2AB3EWF7 344 aa10.29□□□□□ -0.76
LIMS1-210ENST00000449684 K7EN84 100 aa10.29□□□□□ -0.76
LIMS1-210ENST00000449684 M0QY20 66 aa10.29□□□□□ -0.76
LIMS1-210ENST00000449684 WDR73Q6P4I2 378 aa10.29□□□□□ -0.76
LIMS1-210ENST00000449684 RASL11AQ6T310 242 aa10.29□□□□□ -0.76
LIMS1-210ENST00000449684 C1orf43Q9BWL3 253 aa10.29□□□□□ -0.76
LIMS1-210ENST00000449684 GATCO43716 136 aaKnown RBP10.28□□□□□ -0.76
LIMS1-210ENST00000449684 CTRLP40313 264 aa10.28□□□□□ -0.76
LIMS1-210ENST00000449684 XGP55808 180 aa10.28□□□□□ -0.76
LIMS1-210ENST00000449684 MPV17L2Q567V2 206 aa10.28□□□□□ -0.76
LIMS1-210ENST00000449684 Q8N976 141 aa10.28□□□□□ -0.76
LIMS1-210ENST00000449684 IGHV1-24A0A0C4DH33 117 aa10.27□□□□□ -0.77
LIMS1-210ENST00000449684 GAGE6Q13070 117 aa10.27□□□□□ -0.77
LIMS1-210ENST00000449684 WFDC2Q14508 124 aa10.27□□□□□ -0.77
LIMS1-210ENST00000449684 NTM-AS1Q6ZSK4 140 aa10.27□□□□□ -0.77
LIMS1-210ENST00000449684 LYPD6BQ8NI32 183 aa10.27□□□□□ -0.77
LIMS1-210ENST00000449684 FRZBQ92765 325 aa10.27□□□□□ -0.77
LIMS1-210ENST00000449684 NIT2Q9NQR4 276 aa10.27□□□□□ -0.77
LIMS1-210ENST00000449684 ATRAIDQ6UW56 229 aa10.26□□□□□ -0.77
LIMS1-210ENST00000449684 BORCS7Q96B45 105 aa10.26□□□□□ -0.77
LIMS1-210ENST00000449684 SMIM7Q9BQ49 75 aa10.26□□□□□ -0.77
LIMS1-210ENST00000449684 TMEM70Q9BUB7 260 aa10.26□□□□□ -0.77
LIMS1-210ENST00000449684 A0A1B0GVG6 124 aa10.25□□□□□ -0.77
LIMS1-210ENST00000449684 A8MWL6 223 aa10.25□□□□□ -0.77
LIMS1-210ENST00000449684 ZNF727A8MUV8 499 aa10.24□□□□□ -0.77
LIMS1-210ENST00000449684 RBX1P62877 108 aa10.24□□□□□ -0.77
LIMS1-210ENST00000449684 MIAQ16674 131 aa10.24□□□□□ -0.77
LIMS1-210ENST00000449684 IQCJQ1A5X6 159 aa10.24□□□□□ -0.77
LIMS1-210ENST00000449684 C14orf177Q52M58 125 aa10.24□□□□□ -0.77
LIMS1-210ENST00000449684 ENHOQ6UWT2 76 aa10.24□□□□□ -0.77
LIMS1-210ENST00000449684 FAM210AQ96ND0 272 aa10.24□□□□□ -0.77
LIMS1-210ENST00000449684 CNFNQ9BYD5 112 aa10.24□□□□□ -0.77
LIMS1-210ENST00000449684 UBE2L6O14933 153 aa10.23□□□□□ -0.77
LIMS1-210ENST00000449684 SMR3BP02814 79 aaPredicted RBP10.23□□□□□ -0.77
LIMS1-210ENST00000449684 HAMPP81172 84 aa10.23□□□□□ -0.77
LIMS1-210ENST00000449684 CLPSL2Q6UWE3 100 aa10.23□□□□□ -0.77
LIMS1-210ENST00000449684 FAM231DQ6ZW35 169 aa10.23□□□□□ -0.77
LIMS1-210ENST00000449684 LINC00269Q8N2A0 174 aa10.23□□□□□ -0.77
LIMS1-210ENST00000449684 PGLYRP4Q96LB8 373 aa10.23□□□□□ -0.77
LIMS1-210ENST00000449684 TMEM243Q9BU79 118 aa10.23□□□□□ -0.77
LIMS1-210ENST00000449684 FAM229AH3BQW9 127 aa10.22□□□□□ -0.77
LIMS1-210ENST00000449684 HLA-DQA1P01909 254 aa10.22□□□□□ -0.77
LIMS1-210ENST00000449684 COTL1Q14019 142 aa10.22□□□□□ -0.77
LIMS1-210ENST00000449684 GTSF1Q8WW33 167 aa10.22□□□□□ -0.77
LIMS1-210ENST00000449684 NDUFS6O75380 124 aaKnown RBP10.21□□□□□ -0.77
LIMS1-210ENST00000449684 AMTP48728 403 aa10.21□□□□□ -0.77
LIMS1-210ENST00000449684 Q5VSD8 79 aa10.21□□□□□ -0.77
LIMS1-210ENST00000449684 TEX261Q6UWH6 196 aa10.21□□□□□ -0.77
LIMS1-210ENST00000449684 DEFB104AQ8WTQ1 72 aa10.21□□□□□ -0.77
LIMS1-210ENST00000449684 TRAV26-2A0A0B4J265 109 aa10.2□□□□□ -0.78
LIMS1-210ENST00000449684 SRP19P09132 144 aaKnown RBP10.2□□□□□ -0.78
LIMS1-210ENST00000449684 CT83Q5H943 113 aa10.2□□□□□ -0.78
LIMS1-210ENST00000449684 GATD1Q8NB37 220 aa10.2□□□□□ -0.78
LIMS1-210ENST00000449684 REG3AQ06141 175 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms