RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 MUC21A0A0G2JKD1 596 aa11.44□□□□□ -0.58
CHCHD3-203ENST00000448878 MUC21A0A140T8X8 626 aa11.44□□□□□ -0.58
CHCHD3-203ENST00000448878 FAM74A7A6NL05 159 aa11.44□□□□□ -0.58
CHCHD3-203ENST00000448878 PHOX2AO14813 284 aa11.44□□□□□ -0.58
CHCHD3-203ENST00000448878 IFITM3Q01628 133 aa11.44□□□□□ -0.58
CHCHD3-203ENST00000448878 KRTAP26-1Q6PEX3 210 aa11.44□□□□□ -0.58
CHCHD3-203ENST00000448878 ZNF471Q9BX82 626 aaPredicted RBP11.44□□□□□ -0.58
CHCHD3-203ENST00000448878 CNBPP62633 177 aaKnown RBP11.43□□□□□ -0.58
CHCHD3-203ENST00000448878 REG3AQ06141 175 aa11.43□□□□□ -0.58
CHCHD3-203ENST00000448878 CIRBPQ14011 172 aaKnown RBP11.43□□□□□ -0.58
CHCHD3-203ENST00000448878 ODF1Q14990 250 aa11.43□□□□□ -0.58
CHCHD3-203ENST00000448878 OR10AG1Q8NH19 301 aa11.43□□□□□ -0.58
CHCHD3-203ENST00000448878 GTSF1Q8WW33 167 aa11.43□□□□□ -0.58
CHCHD3-203ENST00000448878 RNF185Q96GF1 192 aa11.43□□□□□ -0.58
CHCHD3-203ENST00000448878 TRBV6-1A0A0K0K1D8 114 aa11.42□□□□□ -0.58
CHCHD3-203ENST00000448878 CTXND1A0A1B0GTU2 59 aa11.42□□□□□ -0.58
CHCHD3-203ENST00000448878 ZNF726P1Q15940 193 aa11.42□□□□□ -0.58
CHCHD3-203ENST00000448878 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
CHCHD3-203ENST00000448878 PRR27Q6MZM9 219 aa11.42□□□□□ -0.58
CHCHD3-203ENST00000448878 COX8CQ7Z4L0 72 aa11.42□□□□□ -0.58
CHCHD3-203ENST00000448878 LRP2P98164 4655 aa11.42□□□□□ -0.58
CHCHD3-203ENST00000448878 SMIM17P0DL12 118 aa11.41□□□□□ -0.58
CHCHD3-203ENST00000448878 AKR1C3P42330 323 aa11.4□□□□□ -0.58
CHCHD3-203ENST00000448878 RGS21Q2M5E4 152 aa11.4□□□□□ -0.58
CHCHD3-203ENST00000448878 CST9LP1Q5W188 147 aa11.4□□□□□ -0.58
CHCHD3-203ENST00000448878 SPACA4Q8TDM5 124 aa11.4□□□□□ -0.58
CHCHD3-203ENST00000448878 AQP10Q96PS8 301 aa11.4□□□□□ -0.58
CHCHD3-203ENST00000448878 KIF25-AS1Q9Y6Z4 181 aa11.4□□□□□ -0.58
CHCHD3-203ENST00000448878 IGHV1-24A0A0C4DH33 117 aa11.39□□□□□ -0.59
CHCHD3-203ENST00000448878 LTAP01374 205 aa11.39□□□□□ -0.59
CHCHD3-203ENST00000448878 STOML3Q8TAV4 291 aa11.39□□□□□ -0.59
CHCHD3-203ENST00000448878 LINC01600Q96MT4 127 aa11.39□□□□□ -0.59
CHCHD3-203ENST00000448878 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
CHCHD3-203ENST00000448878 BORCS7-ASMTA0A0B4J1R7 106 aa11.38□□□□□ -0.59
CHCHD3-203ENST00000448878 TRAV8-4A0A0B4J246 113 aa11.38□□□□□ -0.59
CHCHD3-203ENST00000448878 P01737 135 aa11.38□□□□□ -0.59
CHCHD3-203ENST00000448878 SLPIP03973 132 aa11.38□□□□□ -0.59
CHCHD3-203ENST00000448878 AKR1C8PQ5T2L2 129 aa11.38□□□□□ -0.59
CHCHD3-203ENST00000448878 RPL7L1Q6DKI1 246 aaKnown RBP11.38□□□□□ -0.59
CHCHD3-203ENST00000448878 MAJINQ3KP22 176 aa11.37□□□□□ -0.59
CHCHD3-203ENST00000448878 LYPD6BQ8NI32 183 aa11.37□□□□□ -0.59
CHCHD3-203ENST00000448878 PLAC8Q9NZF1 115 aa11.37□□□□□ -0.59
CHCHD3-203ENST00000448878 IGKV2-24A0A0C4DH68 120 aa11.36□□□□□ -0.59
CHCHD3-203ENST00000448878 COX6A2Q02221 97 aa11.36□□□□□ -0.59
CHCHD3-203ENST00000448878 IQCJQ1A5X6 159 aa11.36□□□□□ -0.59
CHCHD3-203ENST00000448878 C20orf203Q8NBC4 194 aa11.36□□□□□ -0.59
CHCHD3-203ENST00000448878 INO80EQ8NBZ0 244 aaPredicted RBP11.36□□□□□ -0.59
CHCHD3-203ENST00000448878 MAP1LC3B2A6NCE7 125 aa11.35□□□□□ -0.59
CHCHD3-203ENST00000448878 MGPP08493 103 aa11.35□□□□□ -0.59
CHCHD3-203ENST00000448878 WDR73Q6P4I2 378 aa11.35□□□□□ -0.59
CHCHD3-203ENST00000448878 MAP1LC3BQ9GZQ8 125 aa11.35□□□□□ -0.59
CHCHD3-203ENST00000448878 IGLV4-60A0A075B6I1 120 aa11.34□□□□□ -0.59
CHCHD3-203ENST00000448878 GZMBP10144 247 aa11.34□□□□□ -0.59
CHCHD3-203ENST00000448878 SULT1A2P50226 295 aa11.34□□□□□ -0.59
CHCHD3-203ENST00000448878 AP1S3Q96PC3 154 aa11.34□□□□□ -0.59
CHCHD3-203ENST00000448878 ALG5Q9Y673 324 aa11.34□□□□□ -0.59
CHCHD3-203ENST00000448878 UBE2L6O14933 153 aa11.33□□□□□ -0.6
CHCHD3-203ENST00000448878 SNAI2O43623 268 aa11.33□□□□□ -0.6
CHCHD3-203ENST00000448878 STPG4Q8N801 248 aa11.33□□□□□ -0.6
CHCHD3-203ENST00000448878 TMEM243Q9BU79 118 aa11.33□□□□□ -0.6
CHCHD3-203ENST00000448878 IGKV3OR2-268A0A0C4DH90 116 aa11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 A0A0J9YXV3 536 aa11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 NDUFS6O75380 124 aaKnown RBP11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 CXCL1P09341 107 aa11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 OR5AL1P0C617 328 aa11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 RPS10P46783 165 aaKnown RBP11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 PRR3P79522 188 aaKnown RBP11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 HIGD2BQ4VC39 106 aa11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 Q5BKY6 102 aa11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 CFAP161Q6P656 301 aa11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 PRSS3P2Q8NHM4 247 aa11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 SSBP4Q9BWG4 385 aaPredicted RBP11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 GFRA4Q9GZZ7 299 aa11.32□□□□□ -0.6
CHCHD3-203ENST00000448878 TNXBP22105 4242 aa11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 GAGE12HA6NDE8 117 aa11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 H7C1H1 209 aa11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 PAGE4O60829 102 aa11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 GAS8-AS1O95177 125 aa11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 FHITP49789 147 aa11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 NKX2-5P52952 324 aaPredicted RBP11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 REG3GQ6UW15 175 aa11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 BAGE2Q86Y30 109 aa11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 TCEAL7Q9BRU2 100 aa11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 TPPP3Q9BW30 176 aa11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 MED28Q9H204 178 aa11.31□□□□□ -0.6
CHCHD3-203ENST00000448878 FXYD6-FXYD2A0A087WZ82 144 aa11.3□□□□□ -0.6
CHCHD3-203ENST00000448878 A0A1B0GUV1 79 aa11.3□□□□□ -0.6
CHCHD3-203ENST00000448878 M0QY20 66 aa11.29□□□□□ -0.6
CHCHD3-203ENST00000448878 S100A9P06702 114 aaKnown RBP11.29□□□□□ -0.6
CHCHD3-203ENST00000448878 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
CHCHD3-203ENST00000448878 SPINK6Q6UWN8 80 aa11.28□□□□□ -0.6
CHCHD3-203ENST00000448878 C15orf56Q8N910 161 aa11.28□□□□□ -0.6
CHCHD3-203ENST00000448878 A0A1B0GV50 99 aa11.27□□□□□ -0.61
CHCHD3-203ENST00000448878 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.61
CHCHD3-203ENST00000448878 KRTAP10-8P60410 259 aa11.27□□□□□ -0.61
CHCHD3-203ENST00000448878 PFDN1O60925 122 aa11.26□□□□□ -0.61
CHCHD3-203ENST00000448878 AMTP48728 403 aa11.26□□□□□ -0.61
CHCHD3-203ENST00000448878 RASL11AQ6T310 242 aa11.25□□□□□ -0.61
CHCHD3-203ENST00000448878 Q6ZNX1 250 aa11.25□□□□□ -0.61
CHCHD3-203ENST00000448878 MLST8Q9BVC4 326 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms