RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 HMCN2Q8NDA2 5059 aa10.02□□□□□ -0.8
TRA2A-203ENST00000448549 SNAI2O43623 268 aa10.02□□□□□ -0.81
TRA2A-203ENST00000448549 S100A9P06702 114 aaKnown RBP10.02□□□□□ -0.81
TRA2A-203ENST00000448549 PKIAP61925 76 aa10.02□□□□□ -0.81
TRA2A-203ENST00000448549 SPANXN1Q5VSR9 72 aa10.02□□□□□ -0.81
TRA2A-203ENST00000448549 CLPSL2Q6UWE3 100 aa10.02□□□□□ -0.81
TRA2A-203ENST00000448549 BAGE2Q86Y30 109 aa10.02□□□□□ -0.81
TRA2A-203ENST00000448549 SFT2D1Q8WV19 159 aa10.02□□□□□ -0.81
TRA2A-203ENST00000448549 MLST8Q9BVC4 326 aa10.02□□□□□ -0.81
TRA2A-203ENST00000448549 A0A1B0GV50 99 aa10.01□□□□□ -0.81
TRA2A-203ENST00000448549 SCO2A0A1W2PP80 73 aa10.01□□□□□ -0.81
TRA2A-203ENST00000448549 CXCL1P09341 107 aa10.01□□□□□ -0.81
TRA2A-203ENST00000448549 OR5AL1P0C617 328 aa10.01□□□□□ -0.81
TRA2A-203ENST00000448549 HNRNPA3P51991 378 aaKnown RBP10.01□□□□□ -0.81
TRA2A-203ENST00000448549 RBX1P62877 108 aa10.01□□□□□ -0.81
TRA2A-203ENST00000448549 GAGE6Q13070 117 aa10.01□□□□□ -0.81
TRA2A-203ENST00000448549 DGAT2L7PQ6IED9 249 aa10.01□□□□□ -0.81
TRA2A-203ENST00000448549 LINC00269Q8N2A0 174 aa10.01□□□□□ -0.81
TRA2A-203ENST00000448549 PRR34Q9NV39 138 aa10.01□□□□□ -0.81
TRA2A-203ENST00000448549 TMEM97Q5BJF2 176 aa10□□□□□ -0.81
TRA2A-203ENST00000448549 C9orf163Q8N9P6 203 aa10□□□□□ -0.81
TRA2A-203ENST00000448549 FAM213BQ8TBF2 198 aa10□□□□□ -0.81
TRA2A-203ENST00000448549 DAZAP1Q96EP5 407 aaKnown RBP10□□□□□ -0.81
TRA2A-203ENST00000448549 DERL1Q9BUN8 251 aa10□□□□□ -0.81
TRA2A-203ENST00000448549 BATF3Q9NR55 127 aa10□□□□□ -0.81
TRA2A-203ENST00000448549 VAX2Q9UIW0 290 aa10□□□□□ -0.81
TRA2A-203ENST00000448549 KIF25-AS1Q9Y6Z4 181 aa10□□□□□ -0.81
TRA2A-203ENST00000448549 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10□□□□□ -0.81
TRA2A-203ENST00000448549 SMLR1H3BR10 107 aa9.99□□□□□ -0.81
TRA2A-203ENST00000448549 KRTAP26-1Q6PEX3 210 aa9.99□□□□□ -0.81
TRA2A-203ENST00000448549 MBD3L1Q8WWY6 194 aa9.99□□□□□ -0.81
TRA2A-203ENST00000448549 PLA2G2DQ9UNK4 145 aa9.99□□□□□ -0.81
TRA2A-203ENST00000448549 PANO1I0J062 215 aa9.98□□□□□ -0.81
TRA2A-203ENST00000448549 PFDN1O60925 122 aa9.98□□□□□ -0.81
TRA2A-203ENST00000448549 SMIM17P0DL12 118 aa9.98□□□□□ -0.81
TRA2A-203ENST00000448549 TMUB2Q71RG4 321 aa9.98□□□□□ -0.81
TRA2A-203ENST00000448549 FAT3Q8TDW7 4589 aa9.98□□□□□ -0.81
TRA2A-203ENST00000448549 TRBV25-1A0A075B6N4 114 aa9.97□□□□□ -0.81
TRA2A-203ENST00000448549 SDIM1Q6ZPB5 146 aa9.97□□□□□ -0.81
TRA2A-203ENST00000448549 AP1S3Q96PC3 154 aa9.97□□□□□ -0.81
TRA2A-203ENST00000448549 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.82
TRA2A-203ENST00000448549 UMAD1C9J7I0 102 aa9.96□□□□□ -0.82
TRA2A-203ENST00000448549 IQCJQ1A5X6 159 aa9.96□□□□□ -0.82
TRA2A-203ENST00000448549 KCNRGQ8N5I3 272 aa9.96□□□□□ -0.82
TRA2A-203ENST00000448549 IGHV1-24A0A0C4DH33 117 aa9.95□□□□□ -0.82
TRA2A-203ENST00000448549 M0QY20 66 aa9.95□□□□□ -0.82
TRA2A-203ENST00000448549 MGPP08493 103 aa9.95□□□□□ -0.82
TRA2A-203ENST00000448549 RPL35P42766 123 aaKnown RBP9.95□□□□□ -0.82
TRA2A-203ENST00000448549 REG3AQ06141 175 aa9.95□□□□□ -0.82
TRA2A-203ENST00000448549 CLRN3Q8NCR9 226 aa9.95□□□□□ -0.82
TRA2A-203ENST00000448549 TPPP3Q9BW30 176 aa9.95□□□□□ -0.82
TRA2A-203ENST00000448549 H2AFB1P0C5Y9 115 aa9.94□□□□□ -0.82
TRA2A-203ENST00000448549 GZMBP10144 247 aa9.94□□□□□ -0.82
TRA2A-203ENST00000448549 UBR4Q5T4S7 5183 aa9.94□□□□□ -0.82
TRA2A-203ENST00000448549 hDV102S1A0JD36 115 aa9.93□□□□□ -0.82
TRA2A-203ENST00000448549 ZNF345Q14585 488 aa9.93□□□□□ -0.82
TRA2A-203ENST00000448549 SUMO4Q6EEV6 95 aa9.93□□□□□ -0.82
TRA2A-203ENST00000448549 C20orf203Q8NBC4 194 aa9.93□□□□□ -0.82
TRA2A-203ENST00000448549 H7C1H1 209 aa9.92□□□□□ -0.82
TRA2A-203ENST00000448549 IGLC6P0CF74 106 aa9.92□□□□□ -0.82
TRA2A-203ENST00000448549 RAB5CP51148 216 aa9.92□□□□□ -0.82
TRA2A-203ENST00000448549 NKX2-5P52952 324 aaPredicted RBP9.92□□□□□ -0.82
TRA2A-203ENST00000448549 CNBPP62633 177 aaKnown RBP9.92□□□□□ -0.82
TRA2A-203ENST00000448549 FER1L6-AS1Q8NA97 138 aa9.92□□□□□ -0.82
TRA2A-203ENST00000448549 IGLV4-60A0A075B6I1 120 aa9.91□□□□□ -0.82
TRA2A-203ENST00000448549 A0A0D9SG52 128 aa9.91□□□□□ -0.82
TRA2A-203ENST00000448549 CCL20P78556 96 aa9.91□□□□□ -0.82
TRA2A-203ENST00000448549 RGS21Q2M5E4 152 aa9.91□□□□□ -0.82
TRA2A-203ENST00000448549 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
TRA2A-203ENST00000448549 OR2D3Q8NGH3 330 aa9.91□□□□□ -0.82
TRA2A-203ENST00000448549 DPH3Q96FX2 82 aa9.91□□□□□ -0.82
TRA2A-203ENST00000448549 GFRA4Q9GZZ7 299 aa9.91□□□□□ -0.82
TRA2A-203ENST00000448549 TRAV8-4A0A0B4J246 113 aa9.9□□□□□ -0.82
TRA2A-203ENST00000448549 P01737 135 aa9.9□□□□□ -0.82
TRA2A-203ENST00000448549 SLPIP03973 132 aa9.9□□□□□ -0.82
TRA2A-203ENST00000448549 MT1HL1P0DM35 61 aa9.9□□□□□ -0.82
TRA2A-203ENST00000448549 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
TRA2A-203ENST00000448549 CENPWQ5EE01 88 aa9.9□□□□□ -0.82
TRA2A-203ENST00000448549 C11orf52Q96A22 123 aa9.9□□□□□ -0.82
TRA2A-203ENST00000448549 TMEM243Q9BU79 118 aa9.9□□□□□ -0.82
TRA2A-203ENST00000448549 GNG13Q9P2W3 67 aa9.9□□□□□ -0.82
TRA2A-203ENST00000448549 PKHD1L1Q86WI1 4243 aa9.89□□□□□ -0.83
TRA2A-203ENST00000448549 IGHV3-64A0A075B6Q5 118 aa9.89□□□□□ -0.83
TRA2A-203ENST00000448549 A0A1B0GUV1 79 aa9.89□□□□□ -0.83
TRA2A-203ENST00000448549 KANTRA0A1W2PQU2 76 aa9.89□□□□□ -0.83
TRA2A-203ENST00000448549 BCL2L11O43521 198 aa9.89□□□□□ -0.83
TRA2A-203ENST00000448549 RPS20P60866 119 aaKnown RBP9.89□□□□□ -0.83
TRA2A-203ENST00000448549 CACNG7P62955 275 aa9.89□□□□□ -0.83
TRA2A-203ENST00000448549 RASL11AQ6T310 242 aa9.89□□□□□ -0.83
TRA2A-203ENST00000448549 AP5S1Q9NUS5 200 aa9.89□□□□□ -0.83
TRA2A-203ENST00000448549 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.88□□□□□ -0.83
TRA2A-203ENST00000448549 RAB19A4D1S5 217 aa9.88□□□□□ -0.83
TRA2A-203ENST00000448549 C19orf71A6NCJ1 209 aa9.88□□□□□ -0.83
TRA2A-203ENST00000448549 HMSDA8MTL9 139 aa9.88□□□□□ -0.83
TRA2A-203ENST00000448549 CHTF8P0CG12 524 aa9.88□□□□□ -0.83
TRA2A-203ENST00000448549 Q6ZRU5 148 aa9.88□□□□□ -0.83
TRA2A-203ENST00000448549 MANBALQ9NQG1 85 aa9.88□□□□□ -0.83
TRA2A-203ENST00000448549 A0A087WYN8 130 aa9.87□□□□□ -0.83
TRA2A-203ENST00000448549 NIT2Q9NQR4 276 aa9.87□□□□□ -0.83
TRA2A-203ENST00000448549 F2Z2F3 143 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms