RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 CD28P10747 220 aa11.84□□□□□ -0.51
CHRD-205ENST00000448472 ATP6V0E2Q8NHE4 81 aa11.84□□□□□ -0.51
CHRD-205ENST00000448472 A0A0U1RRA0 63 aa11.84□□□□□ -0.51
CHRD-205ENST00000448472 POLR2KP53803 58 aaKnown RBP11.84□□□□□ -0.51
CHRD-205ENST00000448472 UBE2D3P61077 147 aa11.84□□□□□ -0.51
CHRD-205ENST00000448472 UBE2D2P62837 147 aa11.84□□□□□ -0.51
CHRD-205ENST00000448472 CEMP1Q6PRD7 247 aaPredicted RBP11.83□□□□□ -0.51
CHRD-205ENST00000448472 Q8N1Y9 231 aa11.83□□□□□ -0.52
CHRD-205ENST00000448472 USMG5Q96IX5 58 aa11.83□□□□□ -0.52
CHRD-205ENST00000448472 USP9XQ93008 2570 aaPredicted RBP11.83□□□□□ -0.52
CHRD-205ENST00000448472 SNRPD3P62318 126 aaKnown RBP11.82□□□□□ -0.52
CHRD-205ENST00000448472 WNK1Q9H4A3 2382 aa11.82□□□□□ -0.52
CHRD-205ENST00000448472 TIMM17AQ99595 171 aa11.82□□□□□ -0.52
CHRD-205ENST00000448472 TMEM262E9PQX1 116 aa11.82□□□□□ -0.52
CHRD-205ENST00000448472 TTC32Q5I0X7 151 aa11.82□□□□□ -0.52
CHRD-205ENST00000448472 SETD2Q9BYW2 2564 aaPredicted RBP11.81□□□□□ -0.52
CHRD-205ENST00000448472 TRAV8-3A0A0A6YYJ7 113 aa11.81□□□□□ -0.52
CHRD-205ENST00000448472 GAGE2BQ13066 116 aa11.81□□□□□ -0.52
CHRD-205ENST00000448472 GAGE2EQ4V326 116 aa11.81□□□□□ -0.52
CHRD-205ENST00000448472 GAGE2DQ9UEU5 116 aa11.81□□□□□ -0.52
CHRD-205ENST00000448472 MYO18BQ8IUG5 2567 aa11.81□□□□□ -0.52
CHRD-205ENST00000448472 PTPN13Q12923 2485 aa11.81□□□□□ -0.52
CHRD-205ENST00000448472 SOCS3O14543 225 aa11.81□□□□□ -0.52
CHRD-205ENST00000448472 P0DMU3 169 aa11.81□□□□□ -0.52
CHRD-205ENST00000448472 FAM231AP0DMU4 169 aa11.81□□□□□ -0.52
CHRD-205ENST00000448472 FAM231CP0DMU5 169 aa11.81□□□□□ -0.52
CHRD-205ENST00000448472 SS18L2Q9UHA2 77 aa11.81□□□□□ -0.52
CHRD-205ENST00000448472 MED14OSP0DP75 135 aa11.8□□□□□ -0.52
CHRD-205ENST00000448472 LINC00315P59091 139 aa11.8□□□□□ -0.52
CHRD-205ENST00000448472 POLQO75417 2590 aa11.8□□□□□ -0.52
CHRD-205ENST00000448472 TIMM21Q9BVV7 248 aa11.8□□□□□ -0.52
CHRD-205ENST00000448472 TLN2Q9Y4G6 2542 aa11.8□□□□□ -0.52
CHRD-205ENST00000448472 KIF25-AS1Q9Y6Z4 181 aa11.8□□□□□ -0.52
CHRD-205ENST00000448472 IGHV4OR15-8A0A075B7B6 117 aa11.79□□□□□ -0.52
CHRD-205ENST00000448472 A0A087WW49 117 aa11.79□□□□□ -0.52
CHRD-205ENST00000448472 IGHV4-61A0A0C4DH41 118 aa11.79□□□□□ -0.52
CHRD-205ENST00000448472 B5MCH6 92 aa11.79□□□□□ -0.52
CHRD-205ENST00000448472 GATA3P23771 443 aa11.79□□□□□ -0.52
CHRD-205ENST00000448472 IGHV3-33P01772 117 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 SYNJ2BPP57105 145 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 ATXN8Q156A1 80 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 TNFRSF18Q9Y5U5 241 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 PRRC2AP48634 2157 aaKnown RBP11.78□□□□□ -0.52
CHRD-205ENST00000448472 TEX49A0A1B0GTD5 131 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 A8MZ25 164 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 RHODO00212 210 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 LEPROTO15243 131 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 PRM2P04554 102 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 C10orf99Q6UWK7 81 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 IGHV1OR15-1A0A075B7D0 117 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 I3L3M4 83 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 C2orf82Q6UX34 121 aa11.78□□□□□ -0.52
CHRD-205ENST00000448472 COX6CP09669 75 aa11.77□□□□□ -0.52
CHRD-205ENST00000448472 ZNF22P17026 224 aaPredicted RBP11.77□□□□□ -0.52
CHRD-205ENST00000448472 DAND5Q8N907 189 aa11.77□□□□□ -0.52
CHRD-205ENST00000448472 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.77□□□□□ -0.53
CHRD-205ENST00000448472 TRAV8-4A0A0B4J246 113 aa11.77□□□□□ -0.53
CHRD-205ENST00000448472 IGHV3-38A0A0C4DH36 116 aa11.77□□□□□ -0.53
CHRD-205ENST00000448472 DGAT2L7PQ6IED9 249 aa11.77□□□□□ -0.53
CHRD-205ENST00000448472 ZNF625Q96I27 306 aaPredicted RBP11.77□□□□□ -0.53
CHRD-205ENST00000448472 PKD1L2Q7Z442 2459 aa11.77□□□□□ -0.53
CHRD-205ENST00000448472 TRBV27A0A0K0K1C4 114 aa11.77□□□□□ -0.53
CHRD-205ENST00000448472 M0QY20 66 aa11.77□□□□□ -0.53
CHRD-205ENST00000448472 KHDC1LQ5JSQ8 128 aa11.77□□□□□ -0.53
CHRD-205ENST00000448472 ATP5J2P56134 94 aa11.76□□□□□ -0.53
CHRD-205ENST00000448472 PROK1P58294 105 aa11.76□□□□□ -0.53
CHRD-205ENST00000448472 LINC01620Q4KN68 170 aa11.76□□□□□ -0.53
CHRD-205ENST00000448472 PIMREGQ9BSJ6 248 aa11.76□□□□□ -0.53
CHRD-205ENST00000448472 KLLNB2CW77 178 aa11.76□□□□□ -0.53
CHRD-205ENST00000448472 C20orf203Q8NBC4 194 aa11.76□□□□□ -0.53
CHRD-205ENST00000448472 IGHV3-16A0A0C4DH30 117 aa11.76□□□□□ -0.53
CHRD-205ENST00000448472 TMEM223A0PJW6 202 aa11.76□□□□□ -0.53
CHRD-205ENST00000448472 IGHV3-30-3P0DP02 117 aa11.76□□□□□ -0.53
CHRD-205ENST00000448472 Q6ZSV7 163 aa11.76□□□□□ -0.53
CHRD-205ENST00000448472 M0R2P5 195 aa11.75□□□□□ -0.53
CHRD-205ENST00000448472 IGHG2P01859 326 aa11.75□□□□□ -0.53
CHRD-205ENST00000448472 ELANEP08246 267 aa11.75□□□□□ -0.53
CHRD-205ENST00000448472 NDUFA12Q9UI09 145 aa11.75□□□□□ -0.53
CHRD-205ENST00000448472 A0A0J9YXY3 114 aa11.74□□□□□ -0.53
CHRD-205ENST00000448472 DUX3Q96PT4 197 aa11.74□□□□□ -0.53
CHRD-205ENST00000448472 IGLV4-3A0A075B6K6 122 aa11.73□□□□□ -0.53
CHRD-205ENST00000448472 TRAV4A0A0B4J268 109 aa11.73□□□□□ -0.53
CHRD-205ENST00000448472 C19orf84I3L1E1 186 aa11.73□□□□□ -0.53
CHRD-205ENST00000448472 LGALS9O00182 355 aa11.73□□□□□ -0.53
CHRD-205ENST00000448472 CLEC2BQ92478 149 aa11.73□□□□□ -0.53
CHRD-205ENST00000448472 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.73□□□□□ -0.53
CHRD-205ENST00000448472 IGHV3OR16-12A0A075B7B8 117 aa11.73□□□□□ -0.53
CHRD-205ENST00000448472 IGKV2-29A2NJV5 120 aaPredicted RBP11.73□□□□□ -0.53
CHRD-205ENST00000448472 TMEM263Q8WUH6 116 aaKnown RBP11.73□□□□□ -0.53
CHRD-205ENST00000448472 RHOHQ15669 191 aa11.73□□□□□ -0.53
CHRD-205ENST00000448472 H3BMM0 161 aa11.72□□□□□ -0.53
CHRD-205ENST00000448472 TRIAP1O43715 76 aa11.72□□□□□ -0.53
CHRD-205ENST00000448472 DCANP1Q8TF63 244 aa11.72□□□□□ -0.53
CHRD-205ENST00000448472 UBE2WQ96B02 151 aa11.72□□□□□ -0.53
CHRD-205ENST00000448472 C15orf53Q8NAA6 179 aa11.72□□□□□ -0.53
CHRD-205ENST00000448472 CCL19Q99731 98 aa11.72□□□□□ -0.53
CHRD-205ENST00000448472 ABCA2Q9BZC7 2435 aa11.72□□□□□ -0.53
CHRD-205ENST00000448472 FAM19A4Q96LR4 140 aa11.72□□□□□ -0.53
CHRD-205ENST00000448472 CRLF1O75462 422 aa11.71□□□□□ -0.54
CHRD-205ENST00000448472 A0A0J9YX75 114 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms