RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 FAM231AP0DMU4 169 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 FAM231CP0DMU5 169 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 FXYD5Q96DB9 178 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 UBE2D1P51668 147 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 CXCL6P80162 114 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 SPRY4Q9C004 299 aa7□□□□□ -1.29
NIPBL-202ENST00000448238 A0A0J9YWU9 116 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 IGHV4-38-2P0DP08 117 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 ATP1A1-AS1Q5TC04 95 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 BPESC1Q9GZL8 116 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 SNURFQ9Y675 71 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 BDP1A6H8Y1 2624 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 CCDC140Q96MF4 163 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 PKD1L2Q7Z442 2459 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 KIAA1551Q9HCM1 1747 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 TMEM223A0PJW6 202 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 J3QRE1 110 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 UBE2D3P61077 147 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 ZNF833PQ6ZTB9 187 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 NPBQ8NG41 125 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 CELA1Q9UNI1 258 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 RSPO4Q2I0M5 234 aaPredicted RBP6.99□□□□□ -1.29
NIPBL-202ENST00000448238 Q8N976 141 aa6.99□□□□□ -1.29
NIPBL-202ENST00000448238 DAND5Q8N907 189 aa6.98□□□□□ -1.29
NIPBL-202ENST00000448238 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
NIPBL-202ENST00000448238 F8W735 103 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-202ENST00000448238 IGHV3-30P01768 117 aa6.98□□□□□ -1.29
NIPBL-202ENST00000448238 IGHV3-33P01772 117 aa6.98□□□□□ -1.29
NIPBL-202ENST00000448238 IGHV3-30-3P0DP02 117 aa6.98□□□□□ -1.29
NIPBL-202ENST00000448238 IGHV3-30-5P0DP03 117 aa6.98□□□□□ -1.29
NIPBL-202ENST00000448238 TRBV10-1A0A0K0K1A3 114 aa6.98□□□□□ -1.29
NIPBL-202ENST00000448238 GTSF1Q8WW33 167 aa6.98□□□□□ -1.29
NIPBL-202ENST00000448238 TRAV7A0A075B6U4 112 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 IGKV1-6A0A0C4DH72 117 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 FAM120AOSQ5T036 256 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 A0A087WZ39 114 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 IGFBP6P24592 240 aaPredicted RBP6.97□□□□□ -1.29
NIPBL-202ENST00000448238 IGKV1-12A0A0C4DH73 117 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 SPAG11AQ6PDA7 123 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 CRIPAKQ8N1N5 446 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 DHRS4-AS1Q9P1J3 65 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 MT-ATP8P03928 68 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 C1orf158Q8N1D5 194 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 NHSQ6T4R5 1651 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 IGLV3-12A0A075B6K2 115 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 GNRH2O43555 120 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 DIAPH2-AS1Q14236 149 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 LINC00311Q8N616 119 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 IGHV4-61A0A0C4DH41 118 aa6.97□□□□□ -1.29
NIPBL-202ENST00000448238 APRG1Q8IVJ8 170 aa6.96□□□□□ -1.29
NIPBL-202ENST00000448238 RPL39LQ96EH5 51 aaKnown RBP6.96□□□□□ -1.29
NIPBL-202ENST00000448238 SPATA12Q7Z6I5 190 aa6.96□□□□□ -1.29
NIPBL-202ENST00000448238 KLK12Q9UKR0 248 aa6.96□□□□□ -1.29
NIPBL-202ENST00000448238 NLRC5Q86WI3 1866 aa6.96□□□□□ -1.29
NIPBL-202ENST00000448238 A0A0G2JMZ2 1700 aa6.96□□□□□ -1.3
NIPBL-202ENST00000448238 LRRC37A2A6NM11 1700 aa6.96□□□□□ -1.3
NIPBL-202ENST00000448238 LRRC37AA6NMS7 1700 aa6.96□□□□□ -1.3
NIPBL-202ENST00000448238 H7C423 109 aa6.96□□□□□ -1.3
NIPBL-202ENST00000448238 LIMD2Q9BT23 127 aa6.96□□□□□ -1.3
NIPBL-202ENST00000448238 SPRR3Q9UBC9 169 aa6.96□□□□□ -1.3
NIPBL-202ENST00000448238 TFF1P04155 84 aa6.96□□□□□ -1.3
NIPBL-202ENST00000448238 ZNF831Q5JPB2 1677 aa6.96□□□□□ -1.3
NIPBL-202ENST00000448238 WT1P19544 449 aaPredicted RBP6.96□□□□□ -1.3
NIPBL-202ENST00000448238 CFAP126Q5VTH2 177 aa6.96□□□□□ -1.3
NIPBL-202ENST00000448238 IGKV1D-17A0A075B6S4 117 aa6.96□□□□□ -1.3
NIPBL-202ENST00000448238 AGPAT4-IT1Q9H0P7 198 aa6.95□□□□□ -1.3
NIPBL-202ENST00000448238 IGKV1D-37A0A075B6S9 117 aa6.95□□□□□ -1.3
NIPBL-202ENST00000448238 TMEM263Q8WUH6 116 aaKnown RBP6.95□□□□□ -1.3
NIPBL-202ENST00000448238 SMIM9A6NGZ8 99 aa6.95□□□□□ -1.3
NIPBL-202ENST00000448238 MDFICQ9P1T7 246 aa6.95□□□□□ -1.3
NIPBL-202ENST00000448238 PLA2G1BP04054 148 aaKnown RBP6.95□□□□□ -1.3
NIPBL-202ENST00000448238 IGLV2-23P01705 113 aa6.95□□□□□ -1.3
NIPBL-202ENST00000448238 MLANAQ16655 118 aa6.95□□□□□ -1.3
NIPBL-202ENST00000448238 ZNF106Q9H2Y7 1883 aaKnown RBP6.94□□□□□ -1.3
NIPBL-202ENST00000448238 LOXP28300 417 aaPredicted RBP6.94□□□□□ -1.3
NIPBL-202ENST00000448238 A0A0J9YXY3 114 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 GP9P14770 177 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 EBI3Q14213 229 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 PLXNA4Q9HCM2 1894 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 FAM19A1Q7Z5A9 133 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 IBA57-AS1B1ANH7 110 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 G3V318 75 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 Q6ZRM9 215 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 TLN1Q9Y490 2541 aaKnown RBP6.94□□□□□ -1.3
NIPBL-202ENST00000448238 M0QXV9 152 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 IGHV4-30-4P0DP06 118 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 IGHV4-31P0DP07 118 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 ODF1Q14990 250 aa6.94□□□□□ -1.3
NIPBL-202ENST00000448238 ZSWIM8A7E2V4 1837 aa6.93□□□□□ -1.3
NIPBL-202ENST00000448238 LRCOL1A6NCL2 159 aa6.93□□□□□ -1.3
NIPBL-202ENST00000448238 HRCT1Q6UXD1 115 aa6.93□□□□□ -1.3
NIPBL-202ENST00000448238 VPREB3Q9UKI3 123 aa6.93□□□□□ -1.3
NIPBL-202ENST00000448238 C3orf84H3BNL1 204 aa6.93□□□□□ -1.3
NIPBL-202ENST00000448238 CSRP1P21291 193 aaKnown RBP6.93□□□□□ -1.3
NIPBL-202ENST00000448238 AJUBAQ96IF1 538 aa6.93□□□□□ -1.3
NIPBL-202ENST00000448238 RNF223E7ERA6 249 aa6.93□□□□□ -1.3
NIPBL-202ENST00000448238 PRO0255Q9UI72 69 aa6.93□□□□□ -1.3
NIPBL-202ENST00000448238 MTORP42345 2549 aa6.93□□□□□ -1.3
NIPBL-202ENST00000448238 SCXQ7RTU7 201 aa6.93□□□□□ -1.3
NIPBL-202ENST00000448238 AHDC1Q5TGY3 1603 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms