RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 C15orf54Q8N8G6 183 aa11.9□□□□□ -0.5
COL9A1-205ENST00000447041 F5H697 171 aa11.89□□□□□ -0.51
COL9A1-205ENST00000447041 CRPP02741 224 aa11.89□□□□□ -0.51
COL9A1-205ENST00000447041 C1orf43Q9BWL3 253 aa11.89□□□□□ -0.51
COL9A1-205ENST00000447041 GNG13Q9P2W3 67 aa11.89□□□□□ -0.51
COL9A1-205ENST00000447041 KIF25-AS1Q9Y6Z4 181 aa11.89□□□□□ -0.51
COL9A1-205ENST00000447041 ANGP03950 147 aaKnown RBP11.88□□□□□ -0.51
COL9A1-205ENST00000447041 PLA2G1BP04054 148 aaKnown RBP11.88□□□□□ -0.51
COL9A1-205ENST00000447041 EIF5AP63241 154 aaKnown RBP11.88□□□□□ -0.51
COL9A1-205ENST00000447041 NTM-AS1Q6ZSK4 140 aa11.88□□□□□ -0.51
COL9A1-205ENST00000447041 C11orf52Q96A22 123 aa11.88□□□□□ -0.51
COL9A1-205ENST00000447041 AP1S3Q96PC3 154 aa11.88□□□□□ -0.51
COL9A1-205ENST00000447041 CHCHD5Q9BSY4 110 aa11.88□□□□□ -0.51
COL9A1-205ENST00000447041 MANBALQ9NQG1 85 aa11.88□□□□□ -0.51
COL9A1-205ENST00000447041 GZMBP10144 247 aa11.87□□□□□ -0.51
COL9A1-205ENST00000447041 CENPWQ5EE01 88 aa11.87□□□□□ -0.51
COL9A1-205ENST00000447041 IGLV2-8P01709 118 aa11.86□□□□□ -0.51
COL9A1-205ENST00000447041 SMIM17P0DL12 118 aa11.86□□□□□ -0.51
COL9A1-205ENST00000447041 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.86□□□□□ -0.51
COL9A1-205ENST00000447041 TPPP3Q9BW30 176 aa11.86□□□□□ -0.51
COL9A1-205ENST00000447041 VAX2Q9UIW0 290 aa11.86□□□□□ -0.51
COL9A1-205ENST00000447041 HLA-DQA1P01909 254 aa11.85□□□□□ -0.51
COL9A1-205ENST00000447041 CHAC1Q9BUX1 264 aa11.85□□□□□ -0.51
COL9A1-205ENST00000447041 MGPP08493 103 aa11.84□□□□□ -0.51
COL9A1-205ENST00000447041 IGLC6P0CF74 106 aa11.84□□□□□ -0.51
COL9A1-205ENST00000447041 CLPSL2Q6UWE3 100 aa11.84□□□□□ -0.51
COL9A1-205ENST00000447041 CIRBP-AS1Q8TBR5 109 aa11.84□□□□□ -0.51
COL9A1-205ENST00000447041 TRAV1-1A0A0B4J248 108 aa11.83□□□□□ -0.52
COL9A1-205ENST00000447041 RAB19A4D1S5 217 aa11.83□□□□□ -0.52
COL9A1-205ENST00000447041 USP17L23D6RBM5 183 aa11.83□□□□□ -0.52
COL9A1-205ENST00000447041 J3QL48 77 aa11.83□□□□□ -0.52
COL9A1-205ENST00000447041 PKIAP61925 76 aa11.83□□□□□ -0.52
COL9A1-205ENST00000447041 GAGE6Q13070 117 aa11.83□□□□□ -0.52
COL9A1-205ENST00000447041 C14orf177Q52M58 125 aa11.83□□□□□ -0.52
COL9A1-205ENST00000447041 TMEM97Q5BJF2 176 aa11.83□□□□□ -0.52
COL9A1-205ENST00000447041 FER1L6-AS1Q8NA97 138 aa11.83□□□□□ -0.52
COL9A1-205ENST00000447041 OR2D3Q8NGH3 330 aa11.83□□□□□ -0.52
COL9A1-205ENST00000447041 C19orf71A6NCJ1 209 aa11.82□□□□□ -0.52
COL9A1-205ENST00000447041 RBX1P62877 108 aa11.82□□□□□ -0.52
COL9A1-205ENST00000447041 MIAQ16674 131 aa11.82□□□□□ -0.52
COL9A1-205ENST00000447041 TRBV25-1A0A075B6N4 114 aa11.81□□□□□ -0.52
COL9A1-205ENST00000447041 M0QY20 66 aa11.81□□□□□ -0.52
COL9A1-205ENST00000447041 RAB5CP51148 216 aa11.81□□□□□ -0.52
COL9A1-205ENST00000447041 KRTAP10-4P60372 401 aaPredicted RBP11.81□□□□□ -0.52
COL9A1-205ENST00000447041 SUMO4Q6EEV6 95 aa11.81□□□□□ -0.52
COL9A1-205ENST00000447041 DEFB104AQ8WTQ1 72 aa11.81□□□□□ -0.52
COL9A1-205ENST00000447041 DAZAP1Q96EP5 407 aaKnown RBP11.81□□□□□ -0.52
COL9A1-205ENST00000447041 PRR34Q9NV39 138 aa11.81□□□□□ -0.52
COL9A1-205ENST00000447041 TRBV20OR9-2A0A075B6H5 130 aa11.8□□□□□ -0.52
COL9A1-205ENST00000447041 GNG4P50150 75 aa11.8□□□□□ -0.52
COL9A1-205ENST00000447041 SULT1A2P50226 295 aa11.8□□□□□ -0.52
COL9A1-205ENST00000447041 RPS20P60866 119 aaKnown RBP11.8□□□□□ -0.52
COL9A1-205ENST00000447041 MEF2BQ02080 365 aaPredicted RBP11.8□□□□□ -0.52
COL9A1-205ENST00000447041 LINC00269Q8N2A0 174 aa11.8□□□□□ -0.52
COL9A1-205ENST00000447041 LRP1Q07954 4544 aaKnown RBP11.8□□□□□ -0.52
COL9A1-205ENST00000447041 CACNG7P62955 275 aa11.79□□□□□ -0.52
COL9A1-205ENST00000447041 IQCJQ1A5X6 159 aa11.79□□□□□ -0.52
COL9A1-205ENST00000447041 KRTAP26-1Q6PEX3 210 aa11.79□□□□□ -0.52
COL9A1-205ENST00000447041 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
COL9A1-205ENST00000447041 IGHV1-24A0A0C4DH33 117 aa11.78□□□□□ -0.52
COL9A1-205ENST00000447041 KRTAP29-1A8MX34 341 aaPredicted RBP11.78□□□□□ -0.52
COL9A1-205ENST00000447041 TEX46H3BTG2 121 aa11.78□□□□□ -0.52
COL9A1-205ENST00000447041 H7C1H1 209 aa11.78□□□□□ -0.52
COL9A1-205ENST00000447041 P01737 135 aa11.78□□□□□ -0.52
COL9A1-205ENST00000447041 PRSS1P07477 247 aa11.78□□□□□ -0.52
COL9A1-205ENST00000447041 NKX2-5P52952 324 aaPredicted RBP11.78□□□□□ -0.52
COL9A1-205ENST00000447041 EIF5AL1Q6IS14 154 aaKnown RBP11.78□□□□□ -0.52
COL9A1-205ENST00000447041 PDE6DO43924 150 aa11.77□□□□□ -0.53
COL9A1-205ENST00000447041 LYZL1Q6UWQ5 148 aa11.77□□□□□ -0.53
COL9A1-205ENST00000447041 MED9Q9NWA0 146 aa11.77□□□□□ -0.53
COL9A1-205ENST00000447041 FAT3Q8TDW7 4589 aa11.77□□□□□ -0.53
COL9A1-205ENST00000447041 IFNA1P01562 189 aa11.76□□□□□ -0.53
COL9A1-205ENST00000447041 BCL2P10415 239 aa11.76□□□□□ -0.53
COL9A1-205ENST00000447041 IGLV10-54A0A075B6I4 117 aa11.75□□□□□ -0.53
COL9A1-205ENST00000447041 XKRY2A2RUG3 117 aa11.75□□□□□ -0.53
COL9A1-205ENST00000447041 F2Z2F3 143 aa11.75□□□□□ -0.53
COL9A1-205ENST00000447041 TRGC1P0CF51 173 aa11.75□□□□□ -0.53
COL9A1-205ENST00000447041 REG3AQ06141 175 aa11.75□□□□□ -0.53
COL9A1-205ENST00000447041 RASL11AQ6T310 242 aa11.75□□□□□ -0.53
COL9A1-205ENST00000447041 C20orf203Q8NBC4 194 aa11.75□□□□□ -0.53
COL9A1-205ENST00000447041 NTF3P20783 257 aa11.74□□□□□ -0.53
COL9A1-205ENST00000447041 DPH3P1Q9H4G8 78 aa11.74□□□□□ -0.53
COL9A1-205ENST00000447041 IGLV4-60A0A075B6I1 120 aa11.73□□□□□ -0.53
COL9A1-205ENST00000447041 CTRLP40313 264 aa11.73□□□□□ -0.53
COL9A1-205ENST00000447041 DGAT2L7PQ6IED9 249 aa11.73□□□□□ -0.53
COL9A1-205ENST00000447041 PKHD1L1Q86WI1 4243 aa11.73□□□□□ -0.53
COL9A1-205ENST00000447041 TCTE3Q8IZS6 198 aa11.73□□□□□ -0.53
COL9A1-205ENST00000447041 C9orf163Q8N9P6 203 aa11.73□□□□□ -0.53
COL9A1-205ENST00000447041 NUDT10Q8NFP7 164 aa11.73□□□□□ -0.53
COL9A1-205ENST00000447041 NUDT11Q96G61 164 aa11.73□□□□□ -0.53
COL9A1-205ENST00000447041 TMEM243Q9BU79 118 aa11.73□□□□□ -0.53
COL9A1-205ENST00000447041 GFRA4Q9GZZ7 299 aa11.73□□□□□ -0.53
COL9A1-205ENST00000447041 BIN3Q9NQY0 253 aa11.73□□□□□ -0.53
COL9A1-205ENST00000447041 SLC51BQ86UW2 128 aa11.72□□□□□ -0.53
COL9A1-205ENST00000447041 C9orf62Q8N4C0 152 aa11.72□□□□□ -0.53
COL9A1-205ENST00000447041 PGLYRP4Q96LB8 373 aa11.72□□□□□ -0.53
COL9A1-205ENST00000447041 NIT2Q9NQR4 276 aa11.72□□□□□ -0.53
COL9A1-205ENST00000447041 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.72□□□□□ -0.53
COL9A1-205ENST00000447041 PANO1I0J062 215 aa11.71□□□□□ -0.53
COL9A1-205ENST00000447041 RNASE7Q9H1E1 156 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms