RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 HAMPP81172 84 aa6.54□□□□□ -1.36
PTPN3-204ENST00000446349 CACNA1AO00555 2505 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 DEFB104AQ8WTQ1 72 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 DIRC1Q969H9 104 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 ATRXP46100 2492 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 DEFB114Q30KQ6 69 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 LYPD6Q86Y78 171 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 C7orf33Q8WU49 177 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 INAFM1C9JVW0 142 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 TOMM6Q96B49 74 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 NDUFS5O43920 106 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 PYY3Q5JQD4 70 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 ZNF747Q9BV97 191 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 ATG2AQ2TAZ0 1938 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 CPAMD8Q8IZJ3 1885 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 CFC1P0CG37 223 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 FAM167A-AS1Q96KT0 104 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 GTSF1LQ9H1H1 148 aa6.53□□□□□ -1.36
PTPN3-204ENST00000446349 PRB4P10163 310 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-204ENST00000446349 VSIG2Q96IQ7 327 aa6.52□□□□□ -1.37
PTPN3-204ENST00000446349 DEFB131BA0A096LNP1 70 aa6.52□□□□□ -1.37
PTPN3-204ENST00000446349 C11orf86A6NJI1 115 aa6.52□□□□□ -1.37
PTPN3-204ENST00000446349 RAI1Q7Z5J4 1906 aaPredicted RBP6.52□□□□□ -1.37
PTPN3-204ENST00000446349 NOTCH2Q04721 2471 aa6.52□□□□□ -1.37
PTPN3-204ENST00000446349 K7EQG2 157 aa6.52□□□□□ -1.37
PTPN3-204ENST00000446349 MUC7Q8TAX7 377 aa6.52□□□□□ -1.37
PTPN3-204ENST00000446349 CARD19Q96LW7 228 aa6.52□□□□□ -1.37
PTPN3-204ENST00000446349 LY6G6DO95868 133 aa6.52□□□□□ -1.37
PTPN3-204ENST00000446349 TDRG1Q3Y452 100 aa6.52□□□□□ -1.37
PTPN3-204ENST00000446349 TMEM256-PLSCR3K7ERE1 68 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 KLK12Q9UKR0 248 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 SMIM20Q8N5G0 67 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 RITA1Q96K30 269 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 LINC01620Q4KN68 170 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 DLEU1O43261 78 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 NPSP0C0P6 89 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 MP68P56378 58 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 WFDC11Q8NEX6 87 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 MDFICQ9P1T7 246 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 K7EN84 100 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 ADCYAP1P18509 176 aa6.51□□□□□ -1.37
PTPN3-204ENST00000446349 TRACP01848 142 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 BAALC-AS2P0C853 105 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 IGLC3P0DOY3 106 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 ANKRD29Q8N6D5 301 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 P0DMU3 169 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 FAM231AP0DMU4 169 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 FAM231CP0DMU5 169 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 POLR3KQ9Y2Y1 108 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-204ENST00000446349 CRYGDP07320 174 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 HIGD2BQ4VC39 106 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 PIK3CD-AS1Q5SR53 167 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 MORN5Q5VZ52 161 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 DEFB125Q8N687 156 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 LINC00474Q9P2X8 69 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 PATE2Q6UY27 113 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 HIGD1BQ9P298 99 aa6.5□□□□□ -1.37
PTPN3-204ENST00000446349 ZNF706Q9Y5V0 76 aaPredicted RBP6.5□□□□□ -1.37
PTPN3-204ENST00000446349 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
PTPN3-204ENST00000446349 TRBV6-4A0A1B0GX49 114 aa6.49□□□□□ -1.37
PTPN3-204ENST00000446349 Q6ZSV7 163 aa6.49□□□□□ -1.37
PTPN3-204ENST00000446349 TINCRA0A1B0GVN0 87 aa6.49□□□□□ -1.37
PTPN3-204ENST00000446349 RPL39LQ96EH5 51 aaKnown RBP6.49□□□□□ -1.37
PTPN3-204ENST00000446349 C19orf84I3L1E1 186 aa6.49□□□□□ -1.37
PTPN3-204ENST00000446349 MIAQ16674 131 aa6.49□□□□□ -1.37
PTPN3-204ENST00000446349 DEFB105AQ8NG35 78 aa6.49□□□□□ -1.37
PTPN3-204ENST00000446349 TMEM258P61165 79 aa6.49□□□□□ -1.37
PTPN3-204ENST00000446349 LY6LH3BQJ8 138 aa6.49□□□□□ -1.37
PTPN3-204ENST00000446349 NDUFC2O95298 119 aa6.49□□□□□ -1.37
PTPN3-204ENST00000446349 IGLV10-54A0A075B6I4 117 aa6.48□□□□□ -1.37
PTPN3-204ENST00000446349 C9orf153Q5TBE3 101 aa6.48□□□□□ -1.37
PTPN3-204ENST00000446349 E9PLD3 99 aa6.48□□□□□ -1.37
PTPN3-204ENST00000446349 NUPR2A6NF83 97 aa6.48□□□□□ -1.37
PTPN3-204ENST00000446349 K7EP34 96 aa6.48□□□□□ -1.37
PTPN3-204ENST00000446349 C12orf74Q32Q52 190 aa6.48□□□□□ -1.37
PTPN3-204ENST00000446349 NREPQ16612 68 aa6.48□□□□□ -1.37
PTPN3-204ENST00000446349 PSMB8P28062 276 aa6.48□□□□□ -1.37
PTPN3-204ENST00000446349 MRGPRG-AS1Q2M3A8 158 aa6.48□□□□□ -1.37
PTPN3-204ENST00000446349 COA6Q5JTJ3 125 aaKnown RBP6.48□□□□□ -1.37
PTPN3-204ENST00000446349 LINC00322Q6ZN03 302 aaPredicted RBP6.48□□□□□ -1.37
PTPN3-204ENST00000446349 TRAV26-1A0A087WT03 109 aa6.47□□□□□ -1.37
PTPN3-204ENST00000446349 RNASE13Q5GAN3 156 aaKnown RBP6.47□□□□□ -1.37
PTPN3-204ENST00000446349 FAM222AQ5U5X8 452 aa6.47□□□□□ -1.37
PTPN3-204ENST00000446349 C20orf203Q8NBC4 194 aa6.47□□□□□ -1.37
PTPN3-204ENST00000446349 CCDC140Q96MF4 163 aa6.47□□□□□ -1.37
PTPN3-204ENST00000446349 UNQ9165/PRO28630Q6UXU0 137 aa6.47□□□□□ -1.37
PTPN3-204ENST00000446349 WIPF3A6NGB9 483 aa6.47□□□□□ -1.37
PTPN3-204ENST00000446349 DKK2Q9UBU2 259 aa6.47□□□□□ -1.37
PTPN3-204ENST00000446349 TNRC6BQ9UPQ9 1833 aaKnown RBP6.47□□□□□ -1.37
PTPN3-204ENST00000446349 BAALCQ8WXS3 180 aa6.47□□□□□ -1.37
PTPN3-204ENST00000446349 IGLL1P15814 213 aa6.47□□□□□ -1.37
PTPN3-204ENST00000446349 ZNF580Q9UK33 172 aa6.47□□□□□ -1.37
PTPN3-204ENST00000446349 CRYGBP07316 175 aa6.46□□□□□ -1.37
PTPN3-204ENST00000446349 REG3AQ06141 175 aa6.46□□□□□ -1.37
PTPN3-204ENST00000446349 COX7BP24311 80 aa6.46□□□□□ -1.37
PTPN3-204ENST00000446349 EXPH5Q8NEV8 1989 aa6.46□□□□□ -1.38
PTPN3-204ENST00000446349 ZFAND2AQ8N6M9 145 aa6.46□□□□□ -1.38
PTPN3-204ENST00000446349 GAGE12HA6NDE8 117 aa6.46□□□□□ -1.38
PTPN3-204ENST00000446349 IGLV2-14P01704 120 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms