RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 PROP1O75360 226 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 CGB3P0DN86 165 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 CGB7P0DN87 165 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 IGHV1-58A0A0C4DH39 117 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 C1orf229Q6ZS94 237 aaPredicted RBP6.06□□□□□ -1.44
SMG1-202ENST00000446231 IGHV3-16A0A0C4DH30 117 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 IGHV3-33P01772 117 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 IMUPQ9GZP8 106 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 E7EQL1 145 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 CRLF1O75462 422 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 H7C423 109 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 FLG2Q5D862 2391 aaPredicted RBP6.06□□□□□ -1.44
SMG1-202ENST00000446231 HRCT1Q6UXD1 115 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 A0A0J9YXY3 114 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 INSP01308 110 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 TRGV4A0A0C4DH28 118 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 F6UB75 175 aa6.06□□□□□ -1.44
SMG1-202ENST00000446231 ZNF80P51504 273 aaPredicted RBP6.06□□□□□ -1.44
SMG1-202ENST00000446231 ZNF672Q499Z4 452 aaPredicted RBP6.06□□□□□ -1.44
SMG1-202ENST00000446231 NRGNQ92686 78 aa6.05□□□□□ -1.44
SMG1-202ENST00000446231 FANCD2OSQ96PS1 177 aa6.05□□□□□ -1.44
SMG1-202ENST00000446231 BUB3O43684 328 aa6.05□□□□□ -1.44
SMG1-202ENST00000446231 TMEM61Q8N0U2 210 aa6.05□□□□□ -1.44
SMG1-202ENST00000446231 NDUFC2-KCTD14E9PQ53 114 aa6.05□□□□□ -1.44
SMG1-202ENST00000446231 PFN2P35080 140 aa6.05□□□□□ -1.44
SMG1-202ENST00000446231 NRACQ8N912 160 aa6.05□□□□□ -1.44
SMG1-202ENST00000446231 Q9HAA7 133 aa6.05□□□□□ -1.44
SMG1-202ENST00000446231 A0A0U1RQV1 116 aa6.05□□□□□ -1.44
SMG1-202ENST00000446231 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.04□□□□□ -1.44
SMG1-202ENST00000446231 IGKV2-29A2NJV5 120 aaPredicted RBP6.04□□□□□ -1.44
SMG1-202ENST00000446231 GAS8-AS1O95177 125 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 IGHV1-69P01742 117 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 KAAG1Q9UBP8 84 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 TNS1Q9HBL0 1735 aaKnown RBP6.04□□□□□ -1.44
SMG1-202ENST00000446231 TEX22C9J3V5 150 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 C9orf47Q6ZRZ4 202 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 LINC00526Q96FQ7 95 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 IGFBPL1Q8WX77 278 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 COX7CP15954 63 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 C7orf69Q9H7B7 122 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 MSRB2Q9Y3D2 182 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 ATP6V0E1O15342 81 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 IGHV3-38A0A0C4DH36 116 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 SND1-IT1Q9HBX3 110 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 IGLV11-55A0A075B6I3 123 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 CXCL5P42830 114 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 C14orf132Q9NPU4 83 aa6.04□□□□□ -1.44
SMG1-202ENST00000446231 UPK3BQ9BT76 320 aa6.03□□□□□ -1.44
SMG1-202ENST00000446231 IGHV3-53P01767 116 aa6.03□□□□□ -1.44
SMG1-202ENST00000446231 SHISA2Q6UWI4 295 aa6.03□□□□□ -1.44
SMG1-202ENST00000446231 COL6A5A8TX70 2615 aa6.03□□□□□ -1.44
SMG1-202ENST00000446231 FAM236DA0A1B0GTK5 79 aa6.03□□□□□ -1.44
SMG1-202ENST00000446231 FAM236CP0DP71 79 aa6.03□□□□□ -1.44
SMG1-202ENST00000446231 WT1P19544 449 aaPredicted RBP6.03□□□□□ -1.44
SMG1-202ENST00000446231 PSMB8P28062 276 aa6.03□□□□□ -1.44
SMG1-202ENST00000446231 PRO0461Q9UI25 63 aa6.03□□□□□ -1.44
SMG1-202ENST00000446231 DEFB123Q8N688 67 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 ADAMTS20P59510 1910 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 RNF152Q8N8N0 203 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 C10orf105Q8TEF2 133 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 TRAV23DV6A0A075B6W5 121 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 MBD3L4A6NDZ8 208 aaPredicted RBP6.02□□□□□ -1.45
SMG1-202ENST00000446231 MBD3L3A6NE82 208 aaPredicted RBP6.02□□□□□ -1.45
SMG1-202ENST00000446231 MBD3L5A6NJ08 208 aaPredicted RBP6.02□□□□□ -1.45
SMG1-202ENST00000446231 PDE6GP18545 87 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 MBD3L2Q8NHZ7 208 aaPredicted RBP6.02□□□□□ -1.45
SMG1-202ENST00000446231 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.02□□□□□ -1.45
SMG1-202ENST00000446231 UBE2D1P51668 147 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 PPDPFQ9H3Y8 114 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 UBE2D3P61077 147 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 UBE2D2P62837 147 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 A0A0G2JNJ9 132 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 Q9UFV3 132 aa6.02□□□□□ -1.45
SMG1-202ENST00000446231 SPINK13Q1W4C9 94 aa6.01□□□□□ -1.45
SMG1-202ENST00000446231 COX7B2Q8TF08 81 aa6.01□□□□□ -1.45
SMG1-202ENST00000446231 NBEAL1Q6ZS30 2694 aa6.01□□□□□ -1.45
SMG1-202ENST00000446231 TNRC6BQ9UPQ9 1833 aaKnown RBP6.01□□□□□ -1.45
SMG1-202ENST00000446231 FAM19A5Q7Z5A7 132 aaPredicted RBP6.01□□□□□ -1.45
SMG1-202ENST00000446231 MED14OSP0DP75 135 aa6.01□□□□□ -1.45
SMG1-202ENST00000446231 ZNF22P17026 224 aaPredicted RBP6.01□□□□□ -1.45
SMG1-202ENST00000446231 BRK1Q8WUW1 75 aa6.01□□□□□ -1.45
SMG1-202ENST00000446231 TMEM223A0PJW6 202 aa6.01□□□□□ -1.45
SMG1-202ENST00000446231 NBL1P41271 181 aa6.01□□□□□ -1.45
SMG1-202ENST00000446231 PRB1P04280 392 aa6.01□□□□□ -1.45
SMG1-202ENST00000446231 DAZ2Q13117 558 aaKnown RBP6□□□□□ -1.45
SMG1-202ENST00000446231 DAZ4Q86SG3 579 aaKnown RBP6□□□□□ -1.45
SMG1-202ENST00000446231 DAZ3Q9NR90 486 aaKnown RBP6□□□□□ -1.45
SMG1-202ENST00000446231 U3KQE9 123 aa6□□□□□ -1.45
SMG1-202ENST00000446231 OVOL3O00110 214 aa6□□□□□ -1.45
SMG1-202ENST00000446231 NXPH4O95158 308 aa6□□□□□ -1.45
SMG1-202ENST00000446231 DAD1P61803 113 aa6□□□□□ -1.45
SMG1-202ENST00000446231 ZNF292O60281 2723 aa6□□□□□ -1.45
SMG1-202ENST00000446231 SS18Q15532 418 aa6□□□□□ -1.45
SMG1-202ENST00000446231 C20orf203Q8NBC4 194 aa6□□□□□ -1.45
SMG1-202ENST00000446231 PKIGQ9Y2B9 76 aa6□□□□□ -1.45
SMG1-202ENST00000446231 LY6HO94772 140 aa6□□□□□ -1.45
SMG1-202ENST00000446231 KLK5Q9Y337 293 aaPredicted RBP6□□□□□ -1.45
SMG1-202ENST00000446231 USP17L23D6RBM5 183 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 Q6ZS46 218 aa5.99□□□□□ -1.45
SMG1-202ENST00000446231 LOC107984640A0A0U1RRK4 108 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms