RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 RYR3Q15413 4870 aa2.11□□□□□ -2.07
HMGB1P48-201ENST00000446155 ABCA4P78363 2273 aa2.1□□□□□ -2.07
HMGB1P48-201ENST00000446155 TRAV12-1A0A0B4J245 112 aa2.1□□□□□ -2.07
HMGB1P48-201ENST00000446155 CRPP02741 224 aa2.1□□□□□ -2.07
HMGB1P48-201ENST00000446155 TPT1P13693 172 aaKnown RBP2.1□□□□□ -2.07
HMGB1P48-201ENST00000446155 FABP4P15090 132 aa2.1□□□□□ -2.07
HMGB1P48-201ENST00000446155 MAXP61244 160 aa2.1□□□□□ -2.07
HMGB1P48-201ENST00000446155 DEFB113Q30KQ7 82 aa2.1□□□□□ -2.07
HMGB1P48-201ENST00000446155 C1orf134Q5TEV5 83 aa2.1□□□□□ -2.07
HMGB1P48-201ENST00000446155 WNK1Q9H4A3 2382 aa2.1□□□□□ -2.07
HMGB1P48-201ENST00000446155 POLEQ07864 2286 aa2.1□□□□□ -2.07
HMGB1P48-201ENST00000446155 HELZP42694 1942 aaKnown RBP2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 PKDREJQ9NTG1 2253 aa2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 A0A096LPI6 279 aa2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 hDV103S1A0JD37 113 aa2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 C2orf70A6NJV1 201 aa2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 C5orf58C9J3I9 102 aa2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 TCRAP04437 139 aa2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 CDK6Q00534 326 aa2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 HSD17B12Q53GQ0 312 aa2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 OR5D14Q8NGL3 314 aa2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 TMEM254Q8TBM7 123 aa2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 SFT2D1Q8WV19 159 aa2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 MAGOHBQ96A72 148 aaKnown RBP2.09□□□□□ -2.07
HMGB1P48-201ENST00000446155 SONP18583 2426 aaKnown RBP2.09□□□□□ -2.08
HMGB1P48-201ENST00000446155 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 E7EUB6 86 aa2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 K7EP13 123 aa2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 UQCRQO14949 82 aa2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 SLC25A5P05141 298 aaKnown RBP2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 ZNF93P35789 620 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 DSCR4P56555 118 aaPredicted RBP2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 PDE6HQ13956 83 aa2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 GLYATL3Q5SZD4 288 aa2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 CCL4L1Q8NHW4 92 aa2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 RAB37Q96AX2 223 aa2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 OR4C12Q96R67 309 aa2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 TPRKBQ9Y3C4 175 aa2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 TENM1Q9UKZ4 2725 aa2.08□□□□□ -2.08
HMGB1P48-201ENST00000446155 TCRBV4S1A1TA0A5B7 111 aa2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 ZNF727A8MUV8 499 aa2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 J3QR89 54 aa2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 SMIM24O75264 130 aa2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 SULT1C4O75897 302 aa2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 HBDP02042 147 aa2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 APODP05090 189 aa2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 LSM3P62310 102 aaKnown RBP2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 QRFPP83859 136 aa2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 HAGHLQ6PII5 290 aaPredicted RBP2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 RNASE11Q8TAA1 199 aaKnown RBP2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 MUCL1Q96DR8 90 aa2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 BANF2Q9H503 90 aa2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 ANK3Q12955 4377 aaKnown RBP2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 TNRC6BQ9UPQ9 1833 aaKnown RBP2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 RYR1P21817 5038 aa2.07□□□□□ -2.08
HMGB1P48-201ENST00000446155 RP1P56715 2156 aa2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 A0A087WSZ3 146 aa2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 TRAV27A0A087WT01 109 aa2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 TRAV14DV4A0A0A6YYC5 116 aa2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 J3QRE1 110 aa2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 SAA1P0DJI8 122 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 CLECL1Q8IZS7 167 aa2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 MMGT1Q8N4V1 131 aa2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 FKBP11Q9NYL4 201 aa2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 MYH4Q9Y623 1939 aa2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 HEATR5BQ9P2D3 2071 aa2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 BIRC6Q9NR09 4857 aa2.06□□□□□ -2.08
HMGB1P48-201ENST00000446155 PTPRDP23468 1912 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 ZFC3H1O60293 1989 aaKnown RBP2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 DIDO1Q9BTC0 2240 aaKnown RBP2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 TRAV10A0A0B4J240 114 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 TSPAN19P0C672 248 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 IGLC6P0CF74 106 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 HMGA1P17096 107 aaKnown RBP2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 BRS3P32247 399 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 AKR1D1P51857 326 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 DNAJB13P59910 316 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 BLCAPP62952 87 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 CIRBPQ14011 172 aaKnown RBP2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 RPL13AP3Q6NVV1 102 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 FP248Q71RG6 208 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 ARPINQ7Z6K5 226 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 OR4C6Q8NH72 309 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 CLEC2BQ92478 149 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 SMR3AQ99954 134 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 GGACTQ9BVM4 153 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 ERG28Q9UKR5 140 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 TNFSF18Q9UNG2 199 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 U3KQA8 63 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 MYH8P13535 1937 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 TANC2Q9HCD6 1990 aa2.05□□□□□ -2.08
HMGB1P48-201ENST00000446155 TENM3Q9P273 2699 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 LOC107986453A0A1B0GWG9 222 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 CCDC160A6NGH7 325 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 F8W036 122 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 K7ERU9 68 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 TRACP01848 142 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 LINC00694P0DN24 101 aa2.04□□□□□ -2.08
HMGB1P48-201ENST00000446155 SLC25A4P12235 298 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms