RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 NEXN-AS1Q8NBZ9 246 aa16.28■□□□□ 0.2
C9orf3-207ENST00000445181 H7C1H1 209 aa16.27■□□□□ 0.2
C9orf3-207ENST00000445181 K7EP13 123 aa16.27■□□□□ 0.2
C9orf3-207ENST00000445181 BTF3P20290 206 aaKnown RBP16.27■□□□□ 0.2
C9orf3-207ENST00000445181 GFRA4Q9GZZ7 299 aa16.27■□□□□ 0.2
C9orf3-207ENST00000445181 IFITM2Q01629 132 aa16.26■□□□□ 0.19
C9orf3-207ENST00000445181 TNP2Q05952 138 aa16.26■□□□□ 0.19
C9orf3-207ENST00000445181 SUMO4Q6EEV6 95 aa16.26■□□□□ 0.19
C9orf3-207ENST00000445181 PKD1P98161 4303 aa16.26■□□□□ 0.19
C9orf3-207ENST00000445181 HIGD1CA8MV81 97 aa16.25■□□□□ 0.19
C9orf3-207ENST00000445181 FOXA3P55318 350 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-207ENST00000445181 LINC01556Q5JQF7 62 aa16.25■□□□□ 0.19
C9orf3-207ENST00000445181 C10orf126Q8N4M7 172 aa16.25■□□□□ 0.19
C9orf3-207ENST00000445181 V9GYV3 84 aa16.25■□□□□ 0.19
C9orf3-207ENST00000445181 FAM231BA6NCW3 169 aa16.24■□□□□ 0.19
C9orf3-207ENST00000445181 IGHV3-30P01768 117 aa16.24■□□□□ 0.19
C9orf3-207ENST00000445181 IGHV3-33P01772 117 aa16.24■□□□□ 0.19
C9orf3-207ENST00000445181 IGHV3-30-3P0DP02 117 aa16.24■□□□□ 0.19
C9orf3-207ENST00000445181 IGHV3-30-5P0DP03 117 aa16.24■□□□□ 0.19
C9orf3-207ENST00000445181 TNFRSF18Q9Y5U5 241 aa16.24■□□□□ 0.19
C9orf3-207ENST00000445181 HERC2O95714 4834 aa16.24■□□□□ 0.19
C9orf3-207ENST00000445181 M0QY20 66 aa16.23■□□□□ 0.19
C9orf3-207ENST00000445181 PKHD1P08F94 4074 aa16.22■□□□□ 0.19
C9orf3-207ENST00000445181 A0A1B0GUT8 65 aa16.21■□□□□ 0.19
C9orf3-207ENST00000445181 RASL11AQ6T310 242 aa16.21■□□□□ 0.19
C9orf3-207ENST00000445181 NFE4Q86UQ8 179 aa16.21■□□□□ 0.19
C9orf3-207ENST00000445181 DNAJC30Q96LL9 226 aa16.21■□□□□ 0.19
C9orf3-207ENST00000445181 DAZ4Q86SG3 579 aaKnown RBP16.2■□□□□ 0.18
C9orf3-207ENST00000445181 DAZ3Q9NR90 486 aaKnown RBP16.2■□□□□ 0.18
C9orf3-207ENST00000445181 URGCP-MRPS24S4R325 110 aa16.2■□□□□ 0.18
C9orf3-207ENST00000445181 NAT8BQ9UHF3 227 aa16.19■□□□□ 0.18
C9orf3-207ENST00000445181 KIAA1109Q2LD37 5005 aa16.18■□□□□ 0.18
C9orf3-207ENST00000445181 NUP35Q8NFH5 326 aa16.18■□□□□ 0.18
C9orf3-207ENST00000445181 NIT2Q9NQR4 276 aa16.18■□□□□ 0.18
C9orf3-207ENST00000445181 TRBV6-8A0A0A6YYG3 113 aa16.17■□□□□ 0.18
C9orf3-207ENST00000445181 TRAV26-2A0A0B4J265 109 aa16.17■□□□□ 0.18
C9orf3-207ENST00000445181 KCNIP4Q6PIL6 250 aa16.17■□□□□ 0.18
C9orf3-207ENST00000445181 KRTAP17-1Q9BYP8 105 aa16.17■□□□□ 0.18
C9orf3-207ENST00000445181 RIGQ13278 110 aa16.16■□□□□ 0.18
C9orf3-207ENST00000445181 TMEM97Q5BJF2 176 aa16.16■□□□□ 0.18
C9orf3-207ENST00000445181 Q8N3U1 123 aa16.16■□□□□ 0.18
C9orf3-207ENST00000445181 DYNC1H1Q14204 4646 aaKnown RBP16.15■□□□□ 0.18
C9orf3-207ENST00000445181 DNAH11Q96DT5 4516 aa16.15■□□□□ 0.18
C9orf3-207ENST00000445181 A0A087WX48 190 aa16.15■□□□□ 0.18
C9orf3-207ENST00000445181 IBA57-AS1B1ANH7 110 aa16.15■□□□□ 0.18
C9orf3-207ENST00000445181 GATD1Q8NB37 220 aa16.15■□□□□ 0.18
C9orf3-207ENST00000445181 SMIM27A0A1W2PRY6 76 aa16.14■□□□□ 0.17
C9orf3-207ENST00000445181 TMEM262E9PQX1 116 aa16.14■□□□□ 0.17
C9orf3-207ENST00000445181 Q6ZRN7 208 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-207ENST00000445181 NIT1Q86X76 327 aa16.14■□□□□ 0.17
C9orf3-207ENST00000445181 Q9HAA7 133 aa16.14■□□□□ 0.17
C9orf3-207ENST00000445181 PNRC1Q12796 327 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-207ENST00000445181 CHCHD5Q9BSY4 110 aa16.13■□□□□ 0.17
C9orf3-207ENST00000445181 TMEM191AQ9H0A3 160 aa16.13■□□□□ 0.17
C9orf3-207ENST00000445181 C16orf90A8MZG2 172 aa16.12■□□□□ 0.17
C9orf3-207ENST00000445181 UQCC3Q6UW78 93 aa16.12■□□□□ 0.17
C9orf3-207ENST00000445181 FRZBQ92765 325 aa16.12■□□□□ 0.17
C9orf3-207ENST00000445181 TRBV25-1A0A075B6N4 114 aa16.11■□□□□ 0.17
C9orf3-207ENST00000445181 PPP1R2P9O14990 202 aa16.11■□□□□ 0.17
C9orf3-207ENST00000445181 NTM-AS1Q6ZSK4 140 aa16.11■□□□□ 0.17
C9orf3-207ENST00000445181 LAGE3Q14657 143 aa16.1■□□□□ 0.17
C9orf3-207ENST00000445181 RPL39LQ96EH5 51 aaKnown RBP16.1■□□□□ 0.17
C9orf3-207ENST00000445181 CHCHD7Q9BUK0 85 aa16.1■□□□□ 0.17
C9orf3-207ENST00000445181 IGHV1-24A0A0C4DH33 117 aa16.09■□□□□ 0.17
C9orf3-207ENST00000445181 PSCAO43653 123 aa16.09■□□□□ 0.17
C9orf3-207ENST00000445181 PKIAP61925 76 aa16.09■□□□□ 0.17
C9orf3-207ENST00000445181 CAMPP49913 170 aa16.08■□□□□ 0.16
C9orf3-207ENST00000445181 ELOBQ15370 118 aa16.08■□□□□ 0.16
C9orf3-207ENST00000445181 COMMD7Q86VX2 200 aa16.08■□□□□ 0.16
C9orf3-207ENST00000445181 AMN1Q8IY45 258 aa16.08■□□□□ 0.16
C9orf3-207ENST00000445181 EREGO14944 169 aa16.07■□□□□ 0.16
C9orf3-207ENST00000445181 MT-ND4LP03901 98 aa16.07■□□□□ 0.16
C9orf3-207ENST00000445181 SPATA12Q7Z6I5 190 aa16.07■□□□□ 0.16
C9orf3-207ENST00000445181 DEFB104AQ8WTQ1 72 aa16.07■□□□□ 0.16
C9orf3-207ENST00000445181 KLK12Q9UKR0 248 aa16.07■□□□□ 0.16
C9orf3-207ENST00000445181 TRAV8-3A0A0A6YYJ7 113 aa16.06■□□□□ 0.16
C9orf3-207ENST00000445181 A0A1B0GW15 77 aa16.06■□□□□ 0.16
C9orf3-207ENST00000445181 F8W036 122 aa16.06■□□□□ 0.16
C9orf3-207ENST00000445181 RAB4AP20338 218 aa16.06■□□□□ 0.16
C9orf3-207ENST00000445181 COTL1Q14019 142 aa16.06■□□□□ 0.16
C9orf3-207ENST00000445181 IQCJQ1A5X6 159 aa16.06■□□□□ 0.16
C9orf3-207ENST00000445181 RNF185Q96GF1 192 aa16.06■□□□□ 0.16
C9orf3-207ENST00000445181 TMEM218A2RU14 115 aa16.05■□□□□ 0.16
C9orf3-207ENST00000445181 GAGE6Q13070 117 aa16.05■□□□□ 0.16
C9orf3-207ENST00000445181 MPV17L2Q567V2 206 aa16.05■□□□□ 0.16
C9orf3-207ENST00000445181 MRPL54Q6P161 138 aaKnown RBP16.05■□□□□ 0.16
C9orf3-207ENST00000445181 ANAPC16Q96DE5 110 aa16.05■□□□□ 0.16
C9orf3-207ENST00000445181 MRAP2Q96G30 205 aa16.05■□□□□ 0.16
C9orf3-207ENST00000445181 TMEM243Q9BU79 118 aa16.04■□□□□ 0.16
C9orf3-207ENST00000445181 TM2D2Q9BX73 214 aa16.04■□□□□ 0.16
C9orf3-207ENST00000445181 SDHAF1A6NFY7 115 aa16.03■□□□□ 0.16
C9orf3-207ENST00000445181 S100A8P05109 93 aa16.03■□□□□ 0.16
C9orf3-207ENST00000445181 HBBP68871 147 aa16.03■□□□□ 0.16
C9orf3-207ENST00000445181 UBE2WQ96B02 151 aa16.03■□□□□ 0.16
C9orf3-207ENST00000445181 GAS8-AS1O95177 125 aa16.02■□□□□ 0.16
C9orf3-207ENST00000445181 ANGP03950 147 aaKnown RBP16.02■□□□□ 0.16
C9orf3-207ENST00000445181 ADCYAP1P18509 176 aa16.02■□□□□ 0.16
C9orf3-207ENST00000445181 AMTP48728 403 aa16.02■□□□□ 0.16
C9orf3-207ENST00000445181 ATRAIDQ6UW56 229 aa16.02■□□□□ 0.16
C9orf3-207ENST00000445181 ST20Q9HBF5 79 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms