RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 ODF3L1Q8IXM7 274 aa8.61□□□□□ -1.03
FN1-211ENST00000443816 TMEM61Q8N0U2 210 aa8.61□□□□□ -1.03
FN1-211ENST00000443816 B9D2Q9BPU9 175 aa8.61□□□□□ -1.03
FN1-211ENST00000443816 TRBV10-1A0A0K0K1A3 114 aa8.61□□□□□ -1.03
FN1-211ENST00000443816 IGHV4-4A0A075B6R2 117 aa8.61□□□□□ -1.03
FN1-211ENST00000443816 CITED1Q99966 193 aa8.6□□□□□ -1.03
FN1-211ENST00000443816 TRAV12-1A0A0B4J245 112 aa8.6□□□□□ -1.03
FN1-211ENST00000443816 ADCYAP1P18509 176 aa8.6□□□□□ -1.03
FN1-211ENST00000443816 VSIG2Q96IQ7 327 aa8.6□□□□□ -1.03
FN1-211ENST00000443816 RSPO3Q9BXY4 272 aaPredicted RBP8.6□□□□□ -1.03
FN1-211ENST00000443816 SND1-IT1Q9HBX3 110 aa8.6□□□□□ -1.03
FN1-211ENST00000443816 TRACP01848 142 aa8.6□□□□□ -1.03
FN1-211ENST00000443816 ODF3Q96PU9 254 aa8.59□□□□□ -1.03
FN1-211ENST00000443816 SPAG11BQ08648 103 aa8.59□□□□□ -1.03
FN1-211ENST00000443816 A0A0J9YX75 114 aa8.59□□□□□ -1.03
FN1-211ENST00000443816 PPDPFLQ8WWR9 84 aa8.59□□□□□ -1.03
FN1-211ENST00000443816 H0YGX0 51 aa8.59□□□□□ -1.03
FN1-211ENST00000443816 KIR2DL5BQ8NHK3 375 aa8.59□□□□□ -1.03
FN1-211ENST00000443816 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
FN1-211ENST00000443816 DEFB131BA0A096LNP1 70 aa8.59□□□□□ -1.03
FN1-211ENST00000443816 OPRPNQ99935 248 aaPredicted RBP8.59□□□□□ -1.03
FN1-211ENST00000443816 TRBV12-3P01733 135 aa8.58□□□□□ -1.04
FN1-211ENST00000443816 ODF3BA8MYP8 253 aa8.58□□□□□ -1.04
FN1-211ENST00000443816 DKK2Q9UBU2 259 aa8.58□□□□□ -1.04
FN1-211ENST00000443816 ZNF124Q15973 351 aa8.58□□□□□ -1.04
FN1-211ENST00000443816 IGF1P05019 195 aa8.58□□□□□ -1.04
FN1-211ENST00000443816 CRYGDP07320 174 aa8.58□□□□□ -1.04
FN1-211ENST00000443816 TRAV26-1A0A087WT03 109 aa8.58□□□□□ -1.04
FN1-211ENST00000443816 MIFP14174 115 aa8.58□□□□□ -1.04
FN1-211ENST00000443816 ASPHD1Q5U4P2 390 aa8.57□□□□□ -1.04
FN1-211ENST00000443816 TINCRA0A1B0GVN0 87 aa8.57□□□□□ -1.04
FN1-211ENST00000443816 CCL25O15444 150 aa8.57□□□□□ -1.04
FN1-211ENST00000443816 UNQ9165/PRO28630Q6UXU0 137 aa8.57□□□□□ -1.04
FN1-211ENST00000443816 BAALC-AS2P0C853 105 aa8.57□□□□□ -1.04
FN1-211ENST00000443816 NFE4Q86UQ8 179 aa8.57□□□□□ -1.04
FN1-211ENST00000443816 POLR3KQ9Y2Y1 108 aaPredicted RBP8.57□□□□□ -1.04
FN1-211ENST00000443816 IGLC2P0DOY2 106 aa8.56□□□□□ -1.04
FN1-211ENST00000443816 PYY3Q5JQD4 70 aa8.56□□□□□ -1.04
FN1-211ENST00000443816 C10orf91Q5T1B1 145 aa8.56□□□□□ -1.04
FN1-211ENST00000443816 IGLL1P15814 213 aa8.56□□□□□ -1.04
FN1-211ENST00000443816 DEFB114Q30KQ6 69 aa8.55□□□□□ -1.04
FN1-211ENST00000443816 DIRC1Q969H9 104 aa8.55□□□□□ -1.04
FN1-211ENST00000443816 IGLC3P0DOY3 106 aa8.55□□□□□ -1.04
FN1-211ENST00000443816 FAM167A-AS1Q96KT0 104 aa8.55□□□□□ -1.04
FN1-211ENST00000443816 LINC01548A6NM66 108 aa8.55□□□□□ -1.04
FN1-211ENST00000443816 H7C423 109 aa8.55□□□□□ -1.04
FN1-211ENST00000443816 TOMM6Q96B49 74 aa8.55□□□□□ -1.04
FN1-211ENST00000443816 LINC00574Q9H8X3 128 aa8.55□□□□□ -1.04
FN1-211ENST00000443816 MDFICQ9P1T7 246 aa8.55□□□□□ -1.04
FN1-211ENST00000443816 COL27A1Q8IZC6 1860 aaPredicted RBP8.55□□□□□ -1.04
FN1-211ENST00000443816 CTRLP40313 264 aa8.55□□□□□ -1.04
FN1-211ENST00000443816 TRBV6-1A0A0K0K1D8 114 aa8.55□□□□□ -1.04
FN1-211ENST00000443816 ANKRD29Q8N6D5 301 aa8.54□□□□□ -1.04
FN1-211ENST00000443816 GTSF1Q8WW33 167 aa8.54□□□□□ -1.04
FN1-211ENST00000443816 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
FN1-211ENST00000443816 A0A1W2PPM0 123 aa8.54□□□□□ -1.04
FN1-211ENST00000443816 C11orf71Q6IPW1 123 aa8.54□□□□□ -1.04
FN1-211ENST00000443816 ZNF747Q9BV97 191 aa8.54□□□□□ -1.04
FN1-211ENST00000443816 HIGD2BQ4VC39 106 aa8.54□□□□□ -1.04
FN1-211ENST00000443816 FAM222AQ5U5X8 452 aa8.54□□□□□ -1.04
FN1-211ENST00000443816 WIPF3A6NGB9 483 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 C7orf33Q8WU49 177 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 DLEU1O43261 78 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 GATA1P15976 413 aaPredicted RBP8.53□□□□□ -1.04
FN1-211ENST00000443816 BAALCQ8WXS3 180 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 CFC1BP0CG36 223 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 CFC1P0CG37 223 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 SRCAPQ6ZRS2 3230 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 IGHV1-58A0A0C4DH39 117 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 PRAC2D3DTV9 90 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 E7EUB6 86 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 CHKB-CPT1BH3BT56 60 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 PATE2Q6UY27 113 aa8.53□□□□□ -1.04
FN1-211ENST00000443816 TRAV10A0A0B4J240 114 aa8.52□□□□□ -1.04
FN1-211ENST00000443816 C12orf74Q32Q52 190 aa8.52□□□□□ -1.04
FN1-211ENST00000443816 PCSK5Q92824 1860 aa8.52□□□□□ -1.04
FN1-211ENST00000443816 NCR3O14931 201 aa8.52□□□□□ -1.05
FN1-211ENST00000443816 IGLV2-14P01704 120 aa8.52□□□□□ -1.05
FN1-211ENST00000443816 GAGE12HA6NDE8 117 aa8.52□□□□□ -1.05
FN1-211ENST00000443816 PSMG3-AS1Q96PY0 264 aa8.51□□□□□ -1.05
FN1-211ENST00000443816 TMEM256-PLSCR3K7ERE1 68 aa8.51□□□□□ -1.05
FN1-211ENST00000443816 MSMPQ1L6U9 139 aa8.51□□□□□ -1.05
FN1-211ENST00000443816 Q6ZSV7 163 aa8.51□□□□□ -1.05
FN1-211ENST00000443816 LYPD6BQ8NI32 183 aa8.51□□□□□ -1.05
FN1-211ENST00000443816 ACYP1P07311 99 aa8.51□□□□□ -1.05
FN1-211ENST00000443816 CCDC140Q96MF4 163 aa8.51□□□□□ -1.05
FN1-211ENST00000443816 NREPQ16612 68 aa8.51□□□□□ -1.05
FN1-211ENST00000443816 IGHV4-28A0A0C4DH34 117 aa8.5□□□□□ -1.05
FN1-211ENST00000443816 RPL39P62891 51 aaKnown RBP8.5□□□□□ -1.05
FN1-211ENST00000443816 LINC00269Q8N2A0 174 aa8.5□□□□□ -1.05
FN1-211ENST00000443816 WISP2O76076 250 aa8.5□□□□□ -1.05
FN1-211ENST00000443816 REG3AQ06141 175 aa8.5□□□□□ -1.05
FN1-211ENST00000443816 UFSP1Q6NVU6 142 aa8.5□□□□□ -1.05
FN1-211ENST00000443816 PROP1O75360 226 aa8.5□□□□□ -1.05
FN1-211ENST00000443816 FN1P02751 2386 aaKnown RBP8.49□□□□□ -1.05
FN1-211ENST00000443816 K7ERJ3 54 aa8.49□□□□□ -1.05
FN1-211ENST00000443816 IGF2RP11717 2491 aa8.49□□□□□ -1.05
FN1-211ENST00000443816 C11orf86A6NJI1 115 aa8.49□□□□□ -1.05
FN1-211ENST00000443816 K7EQG2 157 aa8.49□□□□□ -1.05
FN1-211ENST00000443816 MP68P56378 58 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms