RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 IGHV3-33P01772 117 aa10.12□□□□□ -0.79
PCNX3-202ENST00000439247 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
PCNX3-202ENST00000439247 MINOS1Q5TGZ0 78 aa10.12□□□□□ -0.79
PCNX3-202ENST00000439247 CITED1Q99966 193 aa10.12□□□□□ -0.79
PCNX3-202ENST00000439247 MINOS1-NBL1R4GNA1 71 aa10.12□□□□□ -0.79
PCNX3-202ENST00000439247 TRBV7-1A0A0A6YYK4 115 aa10.12□□□□□ -0.79
PCNX3-202ENST00000439247 Q1RN00 199 aa10.12□□□□□ -0.79
PCNX3-202ENST00000439247 PLA2G2AP14555 144 aa10.11□□□□□ -0.79
PCNX3-202ENST00000439247 SOCS3O14543 225 aa10.11□□□□□ -0.79
PCNX3-202ENST00000439247 ZNF876PQ49A33 203 aa10.11□□□□□ -0.79
PCNX3-202ENST00000439247 HIST2H2BCQ6DN03 193 aa10.11□□□□□ -0.79
PCNX3-202ENST00000439247 Q6ZSV7 163 aa10.11□□□□□ -0.79
PCNX3-202ENST00000439247 TMEM263Q8WUH6 116 aaKnown RBP10.11□□□□□ -0.79
PCNX3-202ENST00000439247 CCDC179H3BU77 68 aa10.11□□□□□ -0.79
PCNX3-202ENST00000439247 Q8N1Y9 231 aa10.11□□□□□ -0.79
PCNX3-202ENST00000439247 VCX2Q9H322 139 aa10.11□□□□□ -0.79
PCNX3-202ENST00000439247 TRAV12-3A0A0B4J271 114 aa10.1□□□□□ -0.79
PCNX3-202ENST00000439247 APCP25054 2843 aa10.1□□□□□ -0.79
PCNX3-202ENST00000439247 OOSP1A8MZH6 123 aa10.1□□□□□ -0.79
PCNX3-202ENST00000439247 IGKV3-20P01619 116 aa10.1□□□□□ -0.79
PCNX3-202ENST00000439247 NPC2P61916 151 aa10.1□□□□□ -0.79
PCNX3-202ENST00000439247 LENEPQ9Y5L5 61 aa10.09□□□□□ -0.79
PCNX3-202ENST00000439247 GAGE5Q13069 117 aa10.09□□□□□ -0.79
PCNX3-202ENST00000439247 GAGE6Q13070 117 aa10.09□□□□□ -0.79
PCNX3-202ENST00000439247 C5orf56Q8N8D9 126 aa10.09□□□□□ -0.79
PCNX3-202ENST00000439247 A0A0J9YXV3 536 aa10.09□□□□□ -0.79
PCNX3-202ENST00000439247 TRAV41A0A0B4J266 112 aa10.08□□□□□ -0.8
PCNX3-202ENST00000439247 IGHV1-69DA0A0B4J2H0 117 aa10.08□□□□□ -0.8
PCNX3-202ENST00000439247 VCYO14598 125 aa10.08□□□□□ -0.8
PCNX3-202ENST00000439247 OVOL1O14753 267 aa10.08□□□□□ -0.8
PCNX3-202ENST00000439247 KRTAP10-9P60411 292 aa10.08□□□□□ -0.8
PCNX3-202ENST00000439247 FAM19A4Q96LR4 140 aa10.08□□□□□ -0.8
PCNX3-202ENST00000439247 TRAV12-2A0A075B6T6 113 aa10.08□□□□□ -0.8
PCNX3-202ENST00000439247 GAGE2BQ13066 116 aa10.08□□□□□ -0.8
PCNX3-202ENST00000439247 GAGE2EQ4V326 116 aa10.08□□□□□ -0.8
PCNX3-202ENST00000439247 PAPPA-AS1Q5QFB9 102 aa10.08□□□□□ -0.8
PCNX3-202ENST00000439247 GAGE2DQ9UEU5 116 aa10.08□□□□□ -0.8
PCNX3-202ENST00000439247 FASNP49327 2511 aaKnown RBP10.08□□□□□ -0.8
PCNX3-202ENST00000439247 IGHV4OR15-8A0A075B7B6 117 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 A0A087WW49 117 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 SNCGO76070 127 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 NDUFV3P56181 108 aaKnown RBP10.07□□□□□ -0.8
PCNX3-202ENST00000439247 RNASE13Q5GAN3 156 aaKnown RBP10.07□□□□□ -0.8
PCNX3-202ENST00000439247 MDFICQ9P1T7 246 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 TMEM262E9PQX1 116 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 RHODO00212 210 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 P0DMU3 169 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 FAM231AP0DMU4 169 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 FAM231CP0DMU5 169 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 FAM159AQ6UWV7 190 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 CCL19Q99731 98 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 ANKRD17O75179 2603 aaKnown RBP10.07□□□□□ -0.8
PCNX3-202ENST00000439247 PRRC2AP48634 2157 aaKnown RBP10.07□□□□□ -0.8
PCNX3-202ENST00000439247 TMEM223A0PJW6 202 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 A8MZ25 164 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 UBE2E1P51965 193 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 ZNF56Q15929 161 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 BRD3OSQ6XYD6 125 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 TMEM141Q96I45 108 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 TIMM17AQ99595 171 aa10.07□□□□□ -0.8
PCNX3-202ENST00000439247 ZNF469Q96JG9 3925 aaPredicted RBP10.06□□□□□ -0.8
PCNX3-202ENST00000439247 J3QKU1 62 aa10.06□□□□□ -0.8
PCNX3-202ENST00000439247 TRIAP1O43715 76 aa10.06□□□□□ -0.8
PCNX3-202ENST00000439247 LINC01620Q4KN68 170 aa10.06□□□□□ -0.8
PCNX3-202ENST00000439247 POM121L12Q8N7R1 296 aa10.06□□□□□ -0.8
PCNX3-202ENST00000439247 ODF3Q96PU9 254 aa10.06□□□□□ -0.8
PCNX3-202ENST00000439247 SPXQ9BT56 116 aa10.06□□□□□ -0.8
PCNX3-202ENST00000439247 TRAV8-3A0A0A6YYJ7 113 aa10.06□□□□□ -0.8
PCNX3-202ENST00000439247 PPP1R17O96001 155 aa10.06□□□□□ -0.8
PCNX3-202ENST00000439247 PRSS2P07478 247 aa10.06□□□□□ -0.8
PCNX3-202ENST00000439247 ZNF22P17026 224 aaPredicted RBP10.06□□□□□ -0.8
PCNX3-202ENST00000439247 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.06□□□□□ -0.83e-8■■■■□ 21
PCNX3-202ENST00000439247 CEMP1Q6PRD7 247 aaPredicted RBP10.06□□□□□ -0.8
PCNX3-202ENST00000439247 ZANQ9Y493 2812 aa10.05□□□□□ -0.8
PCNX3-202ENST00000439247 LY6EQ16553 131 aa10.05□□□□□ -0.8
PCNX3-202ENST00000439247 KLK9Q2XQG4 91 aa10.05□□□□□ -0.8
PCNX3-202ENST00000439247 RHPN1-AS1Q9BWJ2 59 aa10.05□□□□□ -0.8
PCNX3-202ENST00000439247 KLK9Q9UKQ9 250 aa10.05□□□□□ -0.8
PCNX3-202ENST00000439247 TTC32Q5I0X7 151 aa10.05□□□□□ -0.8
PCNX3-202ENST00000439247 BPESC1Q9GZL8 116 aa10.05□□□□□ -0.8
PCNX3-202ENST00000439247 LEPROTO15243 131 aa10.05□□□□□ -0.8
PCNX3-202ENST00000439247 NXPH4O95158 308 aa10.05□□□□□ -0.8
PCNX3-202ENST00000439247 NAV2Q8IVL1 2488 aa10.04□□□□□ -0.8
PCNX3-202ENST00000439247 TRBV27A0A0K0K1C4 114 aa10.04□□□□□ -0.8
PCNX3-202ENST00000439247 C3orf56Q8N813 242 aa10.04□□□□□ -0.8
PCNX3-202ENST00000439247 C15orf53Q8NAA6 179 aa10.04□□□□□ -0.8
PCNX3-202ENST00000439247 HECTD1Q9ULT8 2610 aa10.04□□□□□ -0.8
PCNX3-202ENST00000439247 ABCA2Q9BZC7 2435 aa10.04□□□□□ -0.8
PCNX3-202ENST00000439247 NPFFO15130 113 aa10.04□□□□□ -0.8
PCNX3-202ENST00000439247 PF4P02776 101 aa10.04□□□□□ -0.8
PCNX3-202ENST00000439247 MED14OSP0DP75 135 aa10.04□□□□□ -0.8
PCNX3-202ENST00000439247 ADAMTSL4-AS1Q5T5F5 129 aa10.04□□□□□ -0.8
PCNX3-202ENST00000439247 A0A0J9YXY3 114 aa10.03□□□□□ -0.8
PCNX3-202ENST00000439247 CLEC2BQ92478 149 aa10.03□□□□□ -0.8
PCNX3-202ENST00000439247 IGHV3-73A0A0B4J1V6 119 aa10.03□□□□□ -0.8
PCNX3-202ENST00000439247 ITPR2Q14571 2701 aa10.03□□□□□ -0.8
PCNX3-202ENST00000439247 TRAV8-4A0A0B4J246 113 aa10.02□□□□□ -0.8
PCNX3-202ENST00000439247 M0QY20 66 aa10.02□□□□□ -0.8
PCNX3-202ENST00000439247 ATXN8Q156A1 80 aa10.02□□□□□ -0.8
PCNX3-202ENST00000439247 APRG1Q8IVJ8 170 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms