RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SMIM2Q9BVW6 85 aa8.79□□□□□ -1
TRAPPC9-202ENST00000438773 MRGPRG-AS1Q2M3A8 158 aa8.78□□□□□ -1
TRAPPC9-202ENST00000438773 RELNP78509 3460 aa8.78□□□□□ -1
TRAPPC9-202ENST00000438773 RS1O15537 224 aa8.78□□□□□ -1
TRAPPC9-202ENST00000438773 TRPT1Q86TN4 253 aaKnown RBP8.78□□□□□ -1
TRAPPC9-202ENST00000438773 TRAV8-3A0A0A6YYJ7 113 aa8.78□□□□□ -1
TRAPPC9-202ENST00000438773 C11orf68Q9H3H3 251 aaKnown RBP8.78□□□□□ -1
TRAPPC9-202ENST00000438773 TRBV25-1A0A075B6N4 114 aa8.77□□□□□ -1
TRAPPC9-202ENST00000438773 RHODO00212 210 aa8.77□□□□□ -1
TRAPPC9-202ENST00000438773 DNAL4O96015 105 aa8.77□□□□□ -1
TRAPPC9-202ENST00000438773 TP53TG1Q9Y2A0 90 aa8.77□□□□□ -1
TRAPPC9-202ENST00000438773 ZFAND6Q6FIF0 208 aa8.77□□□□□ -1.01
TRAPPC9-202ENST00000438773 TRBV20-1A0A075B6N2 111 aa8.77□□□□□ -1.01
TRAPPC9-202ENST00000438773 LGALS9BQ3B8N2 356 aa8.77□□□□□ -1.01
TRAPPC9-202ENST00000438773 LGALS9CQ6DKI2 356 aa8.77□□□□□ -1.01
TRAPPC9-202ENST00000438773 PSMG3-AS1Q96PY0 264 aa8.77□□□□□ -1.01
TRAPPC9-202ENST00000438773 CFHR3Q02985 330 aa8.77□□□□□ -1.01
TRAPPC9-202ENST00000438773 CHCHD5Q9BSY4 110 aa8.77□□□□□ -1.01
TRAPPC9-202ENST00000438773 PSMB8P28062 276 aa8.76□□□□□ -1.01
TRAPPC9-202ENST00000438773 C4orf3Q8WVX3 66 aa8.76□□□□□ -1.01
TRAPPC9-202ENST00000438773 PTH2Q96A98 100 aa8.76□□□□□ -1.01
TRAPPC9-202ENST00000438773 C12orf74Q32Q52 190 aa8.76□□□□□ -1.01
TRAPPC9-202ENST00000438773 Q6ZSV7 163 aa8.76□□□□□ -1.01
TRAPPC9-202ENST00000438773 C2orf91Q6ZV80 131 aa8.76□□□□□ -1.01
TRAPPC9-202ENST00000438773 CLPSL1A2RUU4 121 aa8.76□□□□□ -1.01
TRAPPC9-202ENST00000438773 PLNP26678 52 aa8.75□□□□□ -1.01
TRAPPC9-202ENST00000438773 TRAV8-4A0A0B4J246 113 aa8.75□□□□□ -1.01
TRAPPC9-202ENST00000438773 TRBV7-9A0A0J9YWB2 115 aa8.75□□□□□ -1.01
TRAPPC9-202ENST00000438773 A0A0J9YX75 114 aa8.75□□□□□ -1.01
TRAPPC9-202ENST00000438773 PIFOQ8TCI5 191 aa8.75□□□□□ -1.01
TRAPPC9-202ENST00000438773 IGLV2-11P01706 119 aa8.75□□□□□ -1.01
TRAPPC9-202ENST00000438773 CRIP1P50238 77 aa8.75□□□□□ -1.01
TRAPPC9-202ENST00000438773 HIST2H2BDQ6DRA6 164 aa8.75□□□□□ -1.01
TRAPPC9-202ENST00000438773 C2orf82Q6UX34 121 aa8.75□□□□□ -1.01
TRAPPC9-202ENST00000438773 GAGE7O76087 117 aa8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 GAGE12FP0CL80 117 aa8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 GAGE12GP0CL81 117 aa8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 GAGE12IP0CL82 117 aa8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 F8W735 103 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 Q8N1Y9 231 aa8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 ZNF702PQ9H963 129 aa8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 LINC01545Q5VT33 79 aa8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 CEND1Q8N111 149 aa8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 RPL39LQ96EH5 51 aaKnown RBP8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 C20orf173Q96LM9 149 aa8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 TRAV13-1A0A0B4J241 112 aa8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 IGHV3-38A0A0C4DH36 116 aa8.74□□□□□ -1.01
TRAPPC9-202ENST00000438773 IGLV1-40P01703 118 aa8.73□□□□□ -1.01
TRAPPC9-202ENST00000438773 C20orf78Q9BR46 151 aa8.73□□□□□ -1.01
TRAPPC9-202ENST00000438773 M0R2P5 195 aa8.73□□□□□ -1.01
TRAPPC9-202ENST00000438773 MAP1AP78559 2803 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC9-202ENST00000438773 LRBAP50851 2863 aa8.73□□□□□ -1.01
TRAPPC9-202ENST00000438773 GAGE12JA6NER3 117 aa8.72□□□□□ -1.01
TRAPPC9-202ENST00000438773 K7EQG2 157 aa8.72□□□□□ -1.01
TRAPPC9-202ENST00000438773 GAGE4Q13068 117 aa8.72□□□□□ -1.01
TRAPPC9-202ENST00000438773 GAGE5Q13069 117 aa8.72□□□□□ -1.01
TRAPPC9-202ENST00000438773 B5MCH6 92 aa8.72□□□□□ -1.01
TRAPPC9-202ENST00000438773 MYMXA0A1B0GTQ4 84 aa8.72□□□□□ -1.01
TRAPPC9-202ENST00000438773 PRSS29PA6NIE9 313 aa8.72□□□□□ -1.01
TRAPPC9-202ENST00000438773 ZNRF2Q8NHG8 242 aa8.72□□□□□ -1.01
TRAPPC9-202ENST00000438773 U3KQE9 123 aa8.72□□□□□ -1.01
TRAPPC9-202ENST00000438773 I3L3M4 83 aa8.71□□□□□ -1.01
TRAPPC9-202ENST00000438773 FGF6P10767 208 aa8.71□□□□□ -1.01
TRAPPC9-202ENST00000438773 LGALS9O00182 355 aa8.71□□□□□ -1.01
TRAPPC9-202ENST00000438773 A0A096LNJ9 63 aa8.71□□□□□ -1.02
TRAPPC9-202ENST00000438773 F8VRH5 84 aa8.71□□□□□ -1.02
TRAPPC9-202ENST00000438773 ZNF493Q6ZR52 646 aa8.71□□□□□ -1.02
TRAPPC9-202ENST00000438773 SS18L2Q9UHA2 77 aa8.71□□□□□ -1.02
TRAPPC9-202ENST00000438773 IGLL5B9A064 214 aa8.7□□□□□ -1.02
TRAPPC9-202ENST00000438773 IGLC6P0CF74 106 aa8.7□□□□□ -1.02
TRAPPC9-202ENST00000438773 MDFICQ9P1T7 246 aa8.7□□□□□ -1.02
TRAPPC9-202ENST00000438773 ASH1LQ9NR48 2969 aaKnown RBP8.7□□□□□ -1.02
TRAPPC9-202ENST00000438773 DCHS2Q6V1P9 2916 aa8.7□□□□□ -1.02
TRAPPC9-202ENST00000438773 MRPS12O15235 138 aaKnown RBP8.7□□□□□ -1.02
TRAPPC9-202ENST00000438773 ZMAT4Q9H898 229 aa8.7□□□□□ -1.02
TRAPPC9-202ENST00000438773 TRAV25A0A0B4J276 109 aa8.7□□□□□ -1.02
TRAPPC9-202ENST00000438773 MRAPQ8TCY5 172 aa8.7□□□□□ -1.02
TRAPPC9-202ENST00000438773 NTN5Q8WTR8 489 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC9-202ENST00000438773 NOP10Q9NPE3 64 aaKnown RBP8.7□□□□□ -1.02
TRAPPC9-202ENST00000438773 ZFAND2AQ8N6M9 145 aa8.69□□□□□ -1.02
TRAPPC9-202ENST00000438773 JPT2Q9H910 190 aa8.69□□□□□ -1.02
TRAPPC9-202ENST00000438773 A0A087WX48 190 aa8.69□□□□□ -1.02
TRAPPC9-202ENST00000438773 SRSF2Q01130 221 aaKnown RBP8.69□□□□□ -1.02
TRAPPC9-202ENST00000438773 C18orf65Q6ZTR6 163 aa8.69□□□□□ -1.02
TRAPPC9-202ENST00000438773 SMR3AQ99954 134 aa8.69□□□□□ -1.02
TRAPPC9-202ENST00000438773 SHISA2Q6UWI4 295 aa8.69□□□□□ -1.02
TRAPPC9-202ENST00000438773 DPH3Q96FX2 82 aa8.69□□□□□ -1.02
TRAPPC9-202ENST00000438773 F8W1H4 67 aa8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 CRIP2P52943 208 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 SUMO4Q6EEV6 95 aa8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 PMVKQ15126 192 aa8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 DEFB114Q30KQ6 69 aa8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 MAP6D1Q9H9H5 199 aa8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 CFAP46Q8IYW2 2715 aa8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 IGKV2D-26A0A0A0MRZ7 120 aa8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 RPL39P62891 51 aaKnown RBP8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 BSNQ9UPA5 3926 aa8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 LINC01006Q8NI28 216 aa8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 AGRNO00468 2067 aa8.68□□□□□ -1.02
TRAPPC9-202ENST00000438773 LINC00158P58513 81 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms