RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 KLK12Q9UKR0 248 aa12.2□□□□□ -0.46
HMGN1-207ENST00000436324 DNAH5Q8TE73 4624 aa12.19□□□□□ -0.46
HMGN1-207ENST00000436324 A0A087WX48 190 aa12.19□□□□□ -0.46
HMGN1-207ENST00000436324 TMEM262E9PQX1 116 aa12.19□□□□□ -0.46
HMGN1-207ENST00000436324 CACNG7P62955 275 aa12.19□□□□□ -0.46
HMGN1-207ENST00000436324 TOR2AQ5JU69 321 aa12.19□□□□□ -0.46
HMGN1-207ENST00000436324 KCNIP4Q6PIL6 250 aa12.19□□□□□ -0.46
HMGN1-207ENST00000436324 LYZL1Q6UWQ5 148 aa12.19□□□□□ -0.46
HMGN1-207ENST00000436324 DNAJC30Q96LL9 226 aa12.19□□□□□ -0.46
HMGN1-207ENST00000436324 IGLV5-52A0A0A0MRZ9 124 aa12.18□□□□□ -0.46
HMGN1-207ENST00000436324 GCSHP23434 173 aa12.18□□□□□ -0.46
HMGN1-207ENST00000436324 CEBPGP53567 150 aa12.18□□□□□ -0.46
HMGN1-207ENST00000436324 OCC1Q8TAD7 63 aa12.18□□□□□ -0.46
HMGN1-207ENST00000436324 RNASE7Q9H1E1 156 aaKnown RBP12.18□□□□□ -0.46
HMGN1-207ENST00000436324 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
HMGN1-207ENST00000436324 K7EN84 100 aa12.17□□□□□ -0.46
HMGN1-207ENST00000436324 LECT2O14960 151 aa12.17□□□□□ -0.46
HMGN1-207ENST00000436324 WFDC2Q14508 124 aa12.17□□□□□ -0.46
HMGN1-207ENST00000436324 Q8N814 137 aa12.17□□□□□ -0.46
HMGN1-207ENST00000436324 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-207ENST00000436324 F2Z2F3 143 aa12.16□□□□□ -0.46
HMGN1-207ENST00000436324 Q8N1X5 172 aa12.16□□□□□ -0.46
HMGN1-207ENST00000436324 UBE2WQ96B02 151 aa12.16□□□□□ -0.46
HMGN1-207ENST00000436324 IGKV2D-24A0A075B6R9 120 aa12.15□□□□□ -0.46
HMGN1-207ENST00000436324 NTF3P20783 257 aa12.15□□□□□ -0.46
HMGN1-207ENST00000436324 SUMO4Q6EEV6 95 aa12.15□□□□□ -0.46
HMGN1-207ENST00000436324 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
HMGN1-207ENST00000436324 RPP21Q9H633 154 aaKnown RBP12.15□□□□□ -0.46
HMGN1-207ENST00000436324 APOBP04114 4563 aaKnown RBP12.15□□□□□ -0.46
HMGN1-207ENST00000436324 M0QY20 66 aa12.14□□□□□ -0.47
HMGN1-207ENST00000436324 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
HMGN1-207ENST00000436324 ELOBQ15370 118 aa12.14□□□□□ -0.47
HMGN1-207ENST00000436324 LYPD6BQ8NI32 183 aa12.14□□□□□ -0.47
HMGN1-207ENST00000436324 NTN5Q8WTR8 489 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-207ENST00000436324 BAALCQ8WXS3 180 aa12.14□□□□□ -0.47
HMGN1-207ENST00000436324 RMI2Q96E14 147 aa12.14□□□□□ -0.47
HMGN1-207ENST00000436324 CHCHD7Q9BUK0 85 aa12.14□□□□□ -0.47
HMGN1-207ENST00000436324 TMEM250H0YL14 139 aa12.13□□□□□ -0.47
HMGN1-207ENST00000436324 XGP55808 180 aa12.13□□□□□ -0.47
HMGN1-207ENST00000436324 NTM-AS1Q6ZSK4 140 aa12.13□□□□□ -0.47
HMGN1-207ENST00000436324 EIF5A2Q9GZV4 153 aaKnown RBP12.13□□□□□ -0.47
HMGN1-207ENST00000436324 H7C1H1 209 aa12.12□□□□□ -0.47
HMGN1-207ENST00000436324 CTRLP40313 264 aa12.12□□□□□ -0.47
HMGN1-207ENST00000436324 TWIST1Q15672 202 aa12.12□□□□□ -0.47
HMGN1-207ENST00000436324 MPV17L2Q567V2 206 aa12.12□□□□□ -0.47
HMGN1-207ENST00000436324 C15orf54Q8N8G6 183 aa12.12□□□□□ -0.47
HMGN1-207ENST00000436324 COX11Q9Y6N1 276 aa12.12□□□□□ -0.47
HMGN1-207ENST00000436324 GATCO43716 136 aaKnown RBP12.11□□□□□ -0.47
HMGN1-207ENST00000436324 HAMPP81172 84 aa12.11□□□□□ -0.47
HMGN1-207ENST00000436324 GAGE6Q13070 117 aa12.11□□□□□ -0.47
HMGN1-207ENST00000436324 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
HMGN1-207ENST00000436324 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
HMGN1-207ENST00000436324 PCLOQ9Y6V0 5065 aa12.11□□□□□ -0.47
HMGN1-207ENST00000436324 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-207ENST00000436324 ANGP03950 147 aaKnown RBP12.1□□□□□ -0.47
HMGN1-207ENST00000436324 WDR73Q6P4I2 378 aa12.1□□□□□ -0.47
HMGN1-207ENST00000436324 RASL11AQ6T310 242 aa12.1□□□□□ -0.47
HMGN1-207ENST00000436324 ATRAIDQ6UW56 229 aa12.1□□□□□ -0.47
HMGN1-207ENST00000436324 Q8N976 141 aa12.1□□□□□ -0.47
HMGN1-207ENST00000436324 DEFB104AQ8WTQ1 72 aa12.1□□□□□ -0.47
HMGN1-207ENST00000436324 TRBV25-1A0A075B6N4 114 aa12.09□□□□□ -0.47
HMGN1-207ENST00000436324 CRPP02741 224 aa12.09□□□□□ -0.47
HMGN1-207ENST00000436324 Q0VG73 95 aa12.09□□□□□ -0.47
HMGN1-207ENST00000436324 ENHOQ6UWT2 76 aa12.09□□□□□ -0.47
HMGN1-207ENST00000436324 GTSF1Q8WW33 167 aa12.09□□□□□ -0.47
HMGN1-207ENST00000436324 FAM210AQ96ND0 272 aa12.08□□□□□ -0.48
HMGN1-207ENST00000436324 SMIM7Q9BQ49 75 aa12.08□□□□□ -0.48
HMGN1-207ENST00000436324 IGHV1-24A0A0C4DH33 117 aa12.07□□□□□ -0.48
HMGN1-207ENST00000436324 PKIAP61925 76 aa12.07□□□□□ -0.48
HMGN1-207ENST00000436324 CLPSL2Q6UWE3 100 aa12.07□□□□□ -0.48
HMGN1-207ENST00000436324 PGLYRP4Q96LB8 373 aa12.07□□□□□ -0.48
HMGN1-207ENST00000436324 C1orf43Q9BWL3 253 aa12.07□□□□□ -0.48
HMGN1-207ENST00000436324 NIT2Q9NQR4 276 aa12.07□□□□□ -0.48
HMGN1-207ENST00000436324 TRAV26-2A0A0B4J265 109 aa12.06□□□□□ -0.48
HMGN1-207ENST00000436324 EPM2AB3EWF7 344 aa12.06□□□□□ -0.48
HMGN1-207ENST00000436324 SMR3BP02814 79 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-207ENST00000436324 FOXA3P55318 350 aaPredicted RBP12.06□□□□□ -0.48
HMGN1-207ENST00000436324 RBX1P62877 108 aa12.06□□□□□ -0.48
HMGN1-207ENST00000436324 FAM231DQ6ZW35 169 aa12.06□□□□□ -0.48
HMGN1-207ENST00000436324 CNFNQ9BYD5 112 aa12.06□□□□□ -0.48
HMGN1-207ENST00000436324 ZNF727A8MUV8 499 aa12.05□□□□□ -0.48
HMGN1-207ENST00000436324 A8MWL6 223 aa12.05□□□□□ -0.48
HMGN1-207ENST00000436324 SRP19P09132 144 aaKnown RBP12.05□□□□□ -0.48
HMGN1-207ENST00000436324 IQCJQ1A5X6 159 aa12.05□□□□□ -0.48
HMGN1-207ENST00000436324 FAM30AQ9NZY2 134 aa12.05□□□□□ -0.48
HMGN1-207ENST00000436324 ABCA13Q86UQ4 5058 aa12.05□□□□□ -0.48
HMGN1-207ENST00000436324 LINC01620Q4KN68 170 aa12.04□□□□□ -0.48
HMGN1-207ENST00000436324 SMIM15Q7Z3B0 74 aa12.04□□□□□ -0.48
HMGN1-207ENST00000436324 GATD1Q8NB37 220 aa12.04□□□□□ -0.48
HMGN1-207ENST00000436324 LINC01551Q86U37 167 aa12.03□□□□□ -0.48
HMGN1-207ENST00000436324 LINC00269Q8N2A0 174 aa12.03□□□□□ -0.48
HMGN1-207ENST00000436324 TMEM243Q9BU79 118 aa12.03□□□□□ -0.48
HMGN1-207ENST00000436324 TMEM70Q9BUB7 260 aa12.03□□□□□ -0.48
HMGN1-207ENST00000436324 HLA-DQA1P01909 254 aa12.02□□□□□ -0.49
HMGN1-207ENST00000436324 RPL39LQ96EH5 51 aaKnown RBP12.02□□□□□ -0.49
HMGN1-207ENST00000436324 NDUFS6O75380 124 aaKnown RBP12.01□□□□□ -0.49
HMGN1-207ENST00000436324 COTL1Q14019 142 aa12.01□□□□□ -0.49
HMGN1-207ENST00000436324 MIAQ16674 131 aa12.01□□□□□ -0.49
HMGN1-207ENST00000436324 FRZBQ92765 325 aa12.01□□□□□ -0.49
HMGN1-207ENST00000436324 AMTP48728 403 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms