RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 VPS13BQ7Z7G8 4022 aa5.11□□□□□ -1.59
VPS50-203ENST00000436177 RNF222A6NCQ9 220 aa5.1□□□□□ -1.59
VPS50-203ENST00000436177 F5H697 171 aa5.1□□□□□ -1.59
VPS50-203ENST00000436177 ARPC5O15511 151 aa5.1□□□□□ -1.59
VPS50-203ENST00000436177 LTAP01374 205 aa5.1□□□□□ -1.59
VPS50-203ENST00000436177 HLA-DQA1P01909 254 aa5.1□□□□□ -1.59
VPS50-203ENST00000436177 ANGP03950 147 aaKnown RBP5.1□□□□□ -1.59
VPS50-203ENST00000436177 SMIM17P0DL12 118 aa5.1□□□□□ -1.59
VPS50-203ENST00000436177 FHITP49789 147 aa5.1□□□□□ -1.59
VPS50-203ENST00000436177 SPANXN1Q5VSR9 72 aa5.1□□□□□ -1.59
VPS50-203ENST00000436177 BATF3Q9NR55 127 aa5.1□□□□□ -1.59
VPS50-203ENST00000436177 Q9UF83 564 aa5.1□□□□□ -1.59
VPS50-203ENST00000436177 TRBV6-8A0A0A6YYG3 113 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 TRBV6-1A0A0K0K1D8 114 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 S100A9P06702 114 aaKnown RBP5.09□□□□□ -1.59
VPS50-203ENST00000436177 RAB4BP61018 213 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 UBE2D3P61077 147 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 UBE2D2P62837 147 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 ZNF674Q2M3X9 581 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 TMEM97Q5BJF2 176 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 Q5BKY6 102 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 COX8CQ7Z4L0 72 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 FAM213BQ8TBF2 198 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 SFT2D1Q8WV19 159 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 AP1S3Q96PC3 154 aa5.09□□□□□ -1.59
VPS50-203ENST00000436177 A0A1B0GV50 99 aa5.08□□□□□ -1.6
VPS50-203ENST00000436177 KRTAP29-1A8MX34 341 aaPredicted RBP5.08□□□□□ -1.6
VPS50-203ENST00000436177 PAGE4O60829 102 aa5.08□□□□□ -1.6
VPS50-203ENST00000436177 CRIP1P50238 77 aa5.08□□□□□ -1.6
VPS50-203ENST00000436177 MIAQ16674 131 aa5.08□□□□□ -1.6
VPS50-203ENST00000436177 PRR27Q6MZM9 219 aa5.08□□□□□ -1.6
VPS50-203ENST00000436177 OR10AG1Q8NH19 301 aa5.08□□□□□ -1.6
VPS50-203ENST00000436177 DNAJC30Q96LL9 226 aa5.08□□□□□ -1.6
VPS50-203ENST00000436177 UMAD1C9J7I0 102 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 USP17L23D6RBM5 183 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 IGLV2-8P01709 118 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 CXCL1P09341 107 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 SSTP61278 116 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 RPL37AP61513 92 aaKnown RBP5.07□□□□□ -1.6
VPS50-203ENST00000436177 MPV17L2Q567V2 206 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 SERTAD4-AS1Q5TG53 156 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 ATRAIDQ6UW56 229 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 BAGE2Q86Y30 109 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 NEXN-AS1Q8NBZ9 246 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 OR10G8Q8NGN5 311 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 CIRBP-AS1Q8TBR5 109 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 TPPP3Q9BW30 176 aa5.07□□□□□ -1.6
VPS50-203ENST00000436177 TRBV25-1A0A075B6N4 114 aa5.06□□□□□ -1.6
VPS50-203ENST00000436177 MUC21A0A0G2JKD1 596 aa5.06□□□□□ -1.6
VPS50-203ENST00000436177 MUC21A0A140T8X8 626 aa5.06□□□□□ -1.6
VPS50-203ENST00000436177 H7C1H1 209 aa5.06□□□□□ -1.6
VPS50-203ENST00000436177 MGPP08493 103 aa5.06□□□□□ -1.6
VPS50-203ENST00000436177 EIF5AP63241 154 aaKnown RBP5.06□□□□□ -1.6
VPS50-203ENST00000436177 RPL19P84098 196 aaKnown RBP5.06□□□□□ -1.6
VPS50-203ENST00000436177 RGS21Q2M5E4 152 aa5.06□□□□□ -1.6
VPS50-203ENST00000436177 CLPSL2Q6UWE3 100 aa5.06□□□□□ -1.6
VPS50-203ENST00000436177 KCNRGQ8N5I3 272 aa5.06□□□□□ -1.6
VPS50-203ENST00000436177 IGHV1-24A0A0C4DH33 117 aa5.05□□□□□ -1.6
VPS50-203ENST00000436177 KANTRA0A1W2PQU2 76 aa5.05□□□□□ -1.6
VPS50-203ENST00000436177 OXTP01178 125 aa5.05□□□□□ -1.6
VPS50-203ENST00000436177 OR5AL1P0C617 328 aa5.05□□□□□ -1.6
VPS50-203ENST00000436177 GAGE6Q13070 117 aa5.05□□□□□ -1.6
VPS50-203ENST00000436177 ENHOQ6UWT2 76 aa5.05□□□□□ -1.6
VPS50-203ENST00000436177 DAZAP1Q96EP5 407 aaKnown RBP5.05□□□□□ -1.6
VPS50-203ENST00000436177 DERL1Q9BUN8 251 aa5.05□□□□□ -1.6
VPS50-203ENST00000436177 XKRY2A2RUG3 117 aa5.04□□□□□ -1.6
VPS50-203ENST00000436177 TEX46H3BTG2 121 aa5.04□□□□□ -1.6
VPS50-203ENST00000436177 SNAI2O43623 268 aa5.04□□□□□ -1.6
VPS50-203ENST00000436177 RPS20P60866 119 aaKnown RBP5.04□□□□□ -1.6
VPS50-203ENST00000436177 RBX1P62877 108 aa5.04□□□□□ -1.6
VPS50-203ENST00000436177 ZNF345Q14585 488 aa5.04□□□□□ -1.6
VPS50-203ENST00000436177 DGAT2L7PQ6IED9 249 aa5.04□□□□□ -1.6
VPS50-203ENST00000436177 LINC00269Q8N2A0 174 aa5.04□□□□□ -1.6
VPS50-203ENST00000436177 DPH3Q96FX2 82 aa5.04□□□□□ -1.6
VPS50-203ENST00000436177 MANBALQ9NQG1 85 aa5.04□□□□□ -1.6
VPS50-203ENST00000436177 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.03□□□□□ -1.6
VPS50-203ENST00000436177 A0A0D9SG52 128 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 hDV102S1A0JD36 115 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 UBE2L6O14933 153 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 RPL35P42766 123 aaKnown RBP5.03□□□□□ -1.6
VPS50-203ENST00000436177 WDR73Q6P4I2 378 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 TMUB2Q71RG4 321 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 FER1L6-AS1Q8NA97 138 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 CLRN3Q8NCR9 226 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 OR2D3Q8NGH3 330 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 MBD3L1Q8WWY6 194 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 TMEM243Q9BU79 118 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 CYTL1Q9NRR1 136 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 GNG13Q9P2W3 67 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 VAX2Q9UIW0 290 aa5.03□□□□□ -1.6
VPS50-203ENST00000436177 IGLV10-54A0A075B6I4 117 aa5.02□□□□□ -1.61
VPS50-203ENST00000436177 SMLR1H3BR10 107 aa5.02□□□□□ -1.61
VPS50-203ENST00000436177 BCL2L11O43521 198 aa5.02□□□□□ -1.61
VPS50-203ENST00000436177 P01737 135 aa5.02□□□□□ -1.61
VPS50-203ENST00000436177 PRSS1P07477 247 aa5.02□□□□□ -1.61
VPS50-203ENST00000436177 TRGC1P0CF51 173 aa5.02□□□□□ -1.61
VPS50-203ENST00000436177 SULT1A2P50226 295 aa5.02□□□□□ -1.61
VPS50-203ENST00000436177 CACNG7P62955 275 aa5.02□□□□□ -1.61
VPS50-203ENST00000436177 REG3AQ06141 175 aa5.02□□□□□ -1.61
VPS50-203ENST00000436177 IQCJQ1A5X6 159 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms