RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 RBFOX3A6NFN3 312 aa13.14□□□□□ -0.31
HLA-B-250ENST00000434333 Q0VG73 95 aa13.14□□□□□ -0.31
HLA-B-250ENST00000434333 KCNIP4Q6PIL6 250 aa13.14□□□□□ -0.31
HLA-B-250ENST00000434333 GNG13Q9P2W3 67 aa13.14□□□□□ -0.31
HLA-B-250ENST00000434333 VAX2Q9UIW0 290 aa13.14□□□□□ -0.31
HLA-B-250ENST00000434333 TMEM262E9PQX1 116 aa13.13□□□□□ -0.31
HLA-B-250ENST00000434333 SSTP61278 116 aa13.13□□□□□ -0.31
HLA-B-250ENST00000434333 SCXQ7RTU7 201 aa13.13□□□□□ -0.31
HLA-B-250ENST00000434333 LINC00528Q8N1L1 170 aa13.13□□□□□ -0.31
HLA-B-250ENST00000434333 IGLC6P0CF74 106 aa13.12□□□□□ -0.31
HLA-B-250ENST00000434333 CENPWQ5EE01 88 aa13.12□□□□□ -0.31
HLA-B-250ENST00000434333 C15orf54Q8N8G6 183 aa13.12□□□□□ -0.31
HLA-B-250ENST00000434333 F5H697 171 aa13.11□□□□□ -0.31
HLA-B-250ENST00000434333 GZMBP10144 247 aa13.11□□□□□ -0.31
HLA-B-250ENST00000434333 AP1S3Q96PC3 154 aa13.11□□□□□ -0.31
HLA-B-250ENST00000434333 C1orf43Q9BWL3 253 aa13.11□□□□□ -0.31
HLA-B-250ENST00000434333 C19orf71A6NCJ1 209 aa13.1□□□□□ -0.31
HLA-B-250ENST00000434333 CHCHD5Q9BSY4 110 aa13.1□□□□□ -0.31
HLA-B-250ENST00000434333 CRPP02741 224 aa13.09□□□□□ -0.31
HLA-B-250ENST00000434333 ANGP03950 147 aaKnown RBP13.09□□□□□ -0.31
HLA-B-250ENST00000434333 PLA2G1BP04054 148 aaKnown RBP13.09□□□□□ -0.31
HLA-B-250ENST00000434333 RAB5CP51148 216 aa13.09□□□□□ -0.31
HLA-B-250ENST00000434333 RAB19A4D1S5 217 aa13.08□□□□□ -0.32
HLA-B-250ENST00000434333 SMIM17P0DL12 118 aa13.08□□□□□ -0.32
HLA-B-250ENST00000434333 SULT1A2P50226 295 aa13.08□□□□□ -0.32
HLA-B-250ENST00000434333 TMEM97Q5BJF2 176 aa13.08□□□□□ -0.32
HLA-B-250ENST00000434333 FER1L6-AS1Q8NA97 138 aa13.08□□□□□ -0.32
HLA-B-250ENST00000434333 OR2D3Q8NGH3 330 aa13.08□□□□□ -0.32
HLA-B-250ENST00000434333 CHAC1Q9BUX1 264 aa13.08□□□□□ -0.32
HLA-B-250ENST00000434333 PRR34Q9NV39 138 aa13.08□□□□□ -0.32
HLA-B-250ENST00000434333 LRP1Q07954 4544 aaKnown RBP13.07□□□□□ -0.32
HLA-B-250ENST00000434333 TRBV20OR9-2A0A075B6H5 130 aa13.07□□□□□ -0.32
HLA-B-250ENST00000434333 M0QY20 66 aa13.07□□□□□ -0.32
HLA-B-250ENST00000434333 PKIAP61925 76 aa13.07□□□□□ -0.32
HLA-B-250ENST00000434333 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.07□□□□□ -0.32
HLA-B-250ENST00000434333 SMIM12Q96EX1 92 aa13.07□□□□□ -0.32
HLA-B-250ENST00000434333 KRTAP10-4P60372 401 aaPredicted RBP13.06□□□□□ -0.32
HLA-B-250ENST00000434333 RBX1P62877 108 aa13.06□□□□□ -0.32
HLA-B-250ENST00000434333 MIAQ16674 131 aa13.06□□□□□ -0.32
HLA-B-250ENST00000434333 KRTAP26-1Q6PEX3 210 aa13.06□□□□□ -0.32
HLA-B-250ENST00000434333 CIRBP-AS1Q8TBR5 109 aa13.06□□□□□ -0.32
HLA-B-250ENST00000434333 TPPP3Q9BW30 176 aa13.06□□□□□ -0.32
HLA-B-250ENST00000434333 MGPP08493 103 aa13.05□□□□□ -0.32
HLA-B-250ENST00000434333 RPS20P60866 119 aaKnown RBP13.05□□□□□ -0.32
HLA-B-250ENST00000434333 MEF2BQ02080 365 aaPredicted RBP13.05□□□□□ -0.32
HLA-B-250ENST00000434333 GAGE6Q13070 117 aa13.05□□□□□ -0.32
HLA-B-250ENST00000434333 IQCJQ1A5X6 159 aa13.05□□□□□ -0.32
HLA-B-250ENST00000434333 C14orf177Q52M58 125 aa13.05□□□□□ -0.32
HLA-B-250ENST00000434333 SUMO4Q6EEV6 95 aa13.05□□□□□ -0.32
HLA-B-250ENST00000434333 FAT3Q8TDW7 4589 aa13.05□□□□□ -0.32
HLA-B-250ENST00000434333 TRBV25-1A0A075B6N4 114 aa13.04□□□□□ -0.32
HLA-B-250ENST00000434333 USP17L23D6RBM5 183 aa13.04□□□□□ -0.32
HLA-B-250ENST00000434333 HLA-DQA1P01909 254 aa13.04□□□□□ -0.32
HLA-B-250ENST00000434333 GNG4P50150 75 aa13.04□□□□□ -0.32
HLA-B-250ENST00000434333 EIF5AL1Q6IS14 154 aaKnown RBP13.04□□□□□ -0.32
HLA-B-250ENST00000434333 CLPSL2Q6UWE3 100 aa13.04□□□□□ -0.32
HLA-B-250ENST00000434333 DAZAP1Q96EP5 407 aaKnown RBP13.04□□□□□ -0.32
HLA-B-250ENST00000434333 TEX46H3BTG2 121 aa13.03□□□□□ -0.32
HLA-B-250ENST00000434333 PDE6DO43924 150 aa13.03□□□□□ -0.32
HLA-B-250ENST00000434333 CACNG7P62955 275 aa13.03□□□□□ -0.32
HLA-B-250ENST00000434333 LINC00269Q8N2A0 174 aa13.03□□□□□ -0.32
HLA-B-250ENST00000434333 PRSS1P07477 247 aa13.02□□□□□ -0.33
HLA-B-250ENST00000434333 BCL2P10415 239 aa13.02□□□□□ -0.33
HLA-B-250ENST00000434333 TCTE3Q8IZS6 198 aa13.02□□□□□ -0.33
HLA-B-250ENST00000434333 MED9Q9NWA0 146 aa13.02□□□□□ -0.33
HLA-B-250ENST00000434333 IGHV1-24A0A0C4DH33 117 aa13.01□□□□□ -0.33
HLA-B-250ENST00000434333 H7C1H1 209 aa13.01□□□□□ -0.33
HLA-B-250ENST00000434333 P01737 135 aa13.01□□□□□ -0.33
HLA-B-250ENST00000434333 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
HLA-B-250ENST00000434333 DEFB104AQ8WTQ1 72 aa13.01□□□□□ -0.33
HLA-B-250ENST00000434333 KRTAP29-1A8MX34 341 aaPredicted RBP13□□□□□ -0.33
HLA-B-250ENST00000434333 F2Z2F3 143 aa13□□□□□ -0.33
HLA-B-250ENST00000434333 NKX2-5P52952 324 aaPredicted RBP13□□□□□ -0.33
HLA-B-250ENST00000434333 C20orf203Q8NBC4 194 aa13□□□□□ -0.33
HLA-B-250ENST00000434333 PKHD1L1Q86WI1 4243 aa12.99□□□□□ -0.33
HLA-B-250ENST00000434333 XKRY2A2RUG3 117 aa12.99□□□□□ -0.33
HLA-B-250ENST00000434333 J3QL48 77 aa12.99□□□□□ -0.33
HLA-B-250ENST00000434333 IFNA1P01562 189 aa12.99□□□□□ -0.33
HLA-B-250ENST00000434333 NTF3P20783 257 aa12.99□□□□□ -0.33
HLA-B-250ENST00000434333 CTRLP40313 264 aa12.99□□□□□ -0.33
HLA-B-250ENST00000434333 RASL11AQ6T310 242 aa12.99□□□□□ -0.33
HLA-B-250ENST00000434333 TRGC1P0CF51 173 aa12.98□□□□□ -0.33
HLA-B-250ENST00000434333 SLC51BQ86UW2 128 aa12.98□□□□□ -0.33
HLA-B-250ENST00000434333 C9orf62Q8N4C0 152 aa12.98□□□□□ -0.33
HLA-B-250ENST00000434333 NUDT10Q8NFP7 164 aa12.98□□□□□ -0.33
HLA-B-250ENST00000434333 NUDT11Q96G61 164 aa12.98□□□□□ -0.33
HLA-B-250ENST00000434333 DPH3P1Q9H4G8 78 aa12.98□□□□□ -0.33
HLA-B-250ENST00000434333 REG3AQ06141 175 aa12.97□□□□□ -0.33
HLA-B-250ENST00000434333 DGAT2L7PQ6IED9 249 aa12.97□□□□□ -0.33
HLA-B-250ENST00000434333 Q6ZNX1 250 aa12.97□□□□□ -0.33
HLA-B-250ENST00000434333 C9orf163Q8N9P6 203 aa12.97□□□□□ -0.33
HLA-B-250ENST00000434333 PGLYRP4Q96LB8 373 aa12.97□□□□□ -0.33
HLA-B-250ENST00000434333 CNFNQ9BYD5 112 aa12.97□□□□□ -0.33
HLA-B-250ENST00000434333 GFRA4Q9GZZ7 299 aa12.97□□□□□ -0.33
HLA-B-250ENST00000434333 NIT2Q9NQR4 276 aa12.97□□□□□ -0.33
HLA-B-250ENST00000434333 BIN3Q9NQY0 253 aa12.97□□□□□ -0.33
HLA-B-250ENST00000434333 IGLV4-60A0A075B6I1 120 aa12.96□□□□□ -0.33
HLA-B-250ENST00000434333 WDR73Q6P4I2 378 aa12.96□□□□□ -0.33
HLA-B-250ENST00000434333 TMEM243Q9BU79 118 aa12.96□□□□□ -0.33
HLA-B-250ENST00000434333 IGLV10-54A0A075B6I4 117 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 878.4 ms